Basic Information

Insect: Meandrusa payeni
Gene Symbol: -
Assembly: GCA_029286785.1
Location: JAGSMX010000037.1:2244124-2251809[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 3 2.4e+02 2.9 1.2 1 12 103 114 103 117 0.83

2 12 0.021 1.7 9.7 0.1 2 23 205 226 204 226 0.96

3 12 2.7e-05 0.0022 18.8 6.2 1 23 232 255 232 255 0.96

4 12 0.0082 0.66 11.0 0.3 1 23 270 292 270 292 0.98

5 12 0.0016 0.13 13.2 4.2 1 23 554 576 554 576 0.98

6 12 0.0057 0.46 11.5 1.4 2 23 582 604 581 604 0.97

7 12 0.0011 0.088 13.7 1.3 2 23 613 634 612 634 0.97

8 12 0.0027 0.22 12.5 0.9 2 23 638 659 637 659 0.96

9 12 0.042 3.4 8.8 2.3 2 23 673 695 672 695 0.96

10 12 9.2e-05 0.0074 17.1 1.4 1 23 701 723 701 723 0.98

11 12 0.017 1.4 10.0 3.3 2 23 730 751 730 751 0.97

12 12 0.0061 0.5 11.4 1.6 1 23 784 807 784 807 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	3	2.4e+02	2.9	1.2	1	12	103	114	103	117	0.83
2	12	0.021	1.7	9.7	0.1	2	23	205	226	204	226	0.96
3	12	2.7e-05	0.0022	18.8	6.2	1	23	232	255	232	255	0.96
4	12	0.0082	0.66	11.0	0.3	1	23	270	292	270	292	0.98
5	12	0.0016	0.13	13.2	4.2	1	23	554	576	554	576	0.98
6	12	0.0057	0.46	11.5	1.4	2	23	582	604	581	604	0.97
7	12	0.0011	0.088	13.7	1.3	2	23	613	634	612	634	0.97
8	12	0.0027	0.22	12.5	0.9	2	23	638	659	637	659	0.96
9	12	0.042	3.4	8.8	2.3	2	23	673	695	672	695	0.96
10	12	9.2e-05	0.0074	17.1	1.4	1	23	701	723	701	723	0.98
11	12	0.017	1.4	10.0	3.3	2	23	730	751	730	751	0.97
12	12	0.0061	0.5	11.4	1.6	1	23	784	807	784	807	0.95

Sequence Information

Coding Sequence: ATGGAGCCAAAACTTACAAACACGAAGGGGCTAAAAACATACTCACGCTCTAAATGTTGGAGCGTAGTGAATCCTAAAGAACATAAAACTGCACCTTTGACTACCAAAAATGCTATTAAGTTTTTGCTGCAAGGGTCATTGAAGAGGAGGGTTTGTCGCTTTTGCTTGAATTCGACGACCTGTTTATCGGAATTGGACGAGATTTTGGAGGTAGCCAGCTCTGGAGCTATATACCAAGTCACTATAAGGGATATGATAGCAAGTTTCTATCCTTTTcagATGCAGTCACCCGCTGATGATCCAAATTTTCCATGTAAAATATGCAGCAAATGCTTAGATAGAACAGTCAACTGCTATCTATTCACACAGCAGTGTGAACAAGCAGAACGGGCATTACGTAACTGCTTTAGTGATATTAGTGAGAAATTCGATAAATTAGACCCCCTGGAAAAGGTCAAGAGACGGGGACGGCAAAAGATAAACCCCAATTATAATAGATTGTATGTAGATTTTGAAAAAGTCATAAACTATGCTGacccaataataaatattgtaaatattggtgcatcggttgaaaagaatgaTGATGATACTGATGAAATCAATGAACTAGAATGTCCTAAATGCTGGCAGGTGTTGCCGAATTTGGAATCATTTATGAACCATGAGAAAATACATCCAAAATCAATGTGGTATAATTGTAAACTTTGTGGAAAGTCATTTGTCAAGCATTCTCATTACAAAAAGCATATTAAACAAATTCATGTACAGGAACGAATGAAGGAAACGGATGCAACTAAGGAGAATTTTAAATGTGATGAGTGTGGATTAGTAACGGAAGAATTTGACAGTTATTTCCAGCATATAGAAAAGCATAAGTTCAAGAATGTTTTAGAGCATTTAATTGAGAAGAAAATGGATGACTTGTGTGGAGTTTGCTTAGATAAAGGGAACCAAATGGTAGAGTTAAATGAGACTTTTGTTTTACATGGAGGATACCCTGAAGTGACTGGAGAGAAGTCTTTGGCTACAGTTTTAACTGCATCTATTCCGGAGATGAATTCAATGCATGACTACACTGGGACAAAAATTTGCGAAACATGCCTCAATCATGCGCTAACatcatacatttttatacataaaattaggTACATTAGAAATAGGTTAGACGTTTGTATTAGTCTCATGTTACAGAGCCTAGATAGGGTCAAGGACCCGGAAAACAATGTGATGGTAGAAATAGCTATAGACACCATCCTCCCGTTGACTAAAAAGATCATTAATGTAGATGTAAACGATGACAATGAAGACATTGATGAATCGAAATTAACAATAGAAGTACTAGAAGATGAATTTCGAATACAATCAGAAAGCTCTGGAGACGAGAGCGTGGAAAATAGTGAGATAGATGCAGAGACATCTAGAAAGGTAATATTTGATGATTTAAAAAAGTTGCTCTATCCAGTTAATAATACGGACATTTCAAACAATCAAAGTAAAGAGGATATTGTACCGGAAGTTAGTAAGAAACTGGTGAATGGTTATCAAACCAATGTTACATTTAACACTGAAATTGAATCTCCACCGGTTAGCGATATATGCAGTGAATTTTTAACTTTCAAGAAGAGACCAAAGCCAATGAGGAAGTTCAGACTAAATTTTACATGCCCTTTCTGCAGTAAGCATTTCGTTTCCGATTATTTCCTCAAGAAGCACGTGCTGAAGCATGTAAATGTGAAAGTTAAATGTAACCTTTGCTCGGATCAGTTCAAGTCGAAATTCTATCTATTCGAACACATGAAAATGGTTCATATAGCGAACGACAAACAGTATAGTGTTTGCAAAACGTGCGGCAGGGCTTTTGTGGAtttcaaaaagtttttaatacacaaaaaaacTCACAATGGCAAGGAGTGCCCACTCTGCGACAAGGTGTTCGTGTCCCAGAATCGTTTCGACAGTCACTTCCAAAGGCACGCGGTCAAATTCCGAGCGCGCAAGAGTCGTATCGCCCAAACCTGTAGTTTCTGCGAGAAGGAATGCTCAAATGAAAATGAACTTTCACTTCACGTGAATAAAACACATTTGCAGATAAAACCTTACAGCTGCGATATGTGCGAGAAGCAGTTCTACACGGAGTACAATTTGAGCAGCCACAAGATGGTGCACGGCTTTCACTCGATGGAAACTTGCGAGTTCTGTACCAAAGTGTTCAAGTGTAGGAGGGATCTGGTCGCTCACGTCAGGAAGCATATAGGATCGAAACCCCACCACTGCCACGTTTGCAGGGAGTCGTTCTATTCGGAAACCAGACAACATAGCCACATGAAAAAGGTTCATGGTGGGAGATTCTGTTGCAGGCTGTGCAAGTCTGTGTTTAATAGGAAGTTGGACTTGAAAGCGCATGTCAATGTGGCTCATAACGCCATTTAA
Protein Sequence: MEPKLTNTKGLKTYSRSKCWSVVNPKEHKTAPLTTKNAIKFLLQGSLKRRVCRFCLNSTTCLSELDEILEVASSGAIYQVTIRDMIASFYPFQMQSPADDPNFPCKICSKCLDRTVNCYLFTQQCEQAERALRNCFSDISEKFDKLDPLEKVKRRGRQKINPNYNRLYVDFEKVINYADPIINIVNIGASVEKNDDDTDEINELECPKCWQVLPNLESFMNHEKIHPKSMWYNCKLCGKSFVKHSHYKKHIKQIHVQERMKETDATKENFKCDECGLVTEEFDSYFQHIEKHKFKNVLEHLIEKKMDDLCGVCLDKGNQMVELNETFVLHGGYPEVTGEKSLATVLTASIPEMNSMHDYTGTKICETCLNHALTSYIFIHKIRYIRNRLDVCISLMLQSLDRVKDPENNVMVEIAIDTILPLTKKIINVDVNDDNEDIDESKLTIEVLEDEFRIQSESSGDESVENSEIDAETSRKVIFDDLKKLLYPVNNTDISNNQSKEDIVPEVSKKLVNGYQTNVTFNTEIESPPVSDICSEFLTFKKRPKPMRKFRLNFTCPFCSKHFVSDYFLKKHVLKHVNVKVKCNLCSDQFKSKFYLFEHMKMVHIANDKQYSVCKTCGRAFVDFKKFLIHKKTHNGKECPLCDKVFVSQNRFDSHFQRHAVKFRARKSRIAQTCSFCEKECSNENELSLHVNKTHLQIKPYSCDMCEKQFYTEYNLSSHKMVHGFHSMETCEFCTKVFKCRRDLVAHVRKHIGSKPHHCHVCRESFYSETRQHSHMKKVHGGRFCCRLCKSVFNRKLDLKAHVNVAHNAI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -