Mpay015977.1
Basic Information
- Insect
- Meandrusa payeni
- Gene Symbol
- -
- Assembly
- GCA_029286785.1
- Location
- JAGSMX010000026.1:2154932-2172051[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.35 28 5.9 0.5 1 23 371 393 371 393 0.97 2 12 0.001 0.084 13.8 6.8 1 23 400 422 400 423 0.94 3 12 0.18 15 6.7 1.8 1 23 427 449 427 449 0.97 4 12 0.066 5.4 8.1 2.1 1 23 454 477 454 477 0.97 5 12 0.006 0.49 11.4 0.3 1 23 481 504 481 504 0.94 6 12 0.014 1.2 10.2 0.0 3 20 518 535 517 537 0.95 7 12 1.4 1.1e+02 4.0 0.4 2 23 596 618 595 618 0.94 8 12 0.015 1.2 10.1 0.8 2 20 634 652 633 655 0.91 9 12 0.0006 0.048 14.6 0.2 1 23 661 683 661 683 0.97 10 12 4.1e-05 0.0033 18.2 4.5 1 23 690 712 690 712 0.97 11 12 0.00016 0.013 16.3 1.9 1 23 718 741 718 741 0.92 12 12 0.00016 0.013 16.3 1.9 1 23 766 789 766 789 0.92
Sequence Information
- Coding Sequence
- atggagttcactaacgccgaaattcgcgctattttaaagttttccttcgttaaaggcaaatccgctagagaaacgttccgtgagattaatggtgttttgggggatggtactctatcacttcgaaccacggaggaatggtttcgacgattcagagccggtgaaaacgacaccatggataagccagccggcagaagacctgtgacgacaaataccgatcaaatcatggactacatcgagttagaccggcatgtggcatctcgtgacatcgcccaggagatgggagttagtaaccaaaccattttaaaccatctgcagaaggctggatacaaaaagcttgatgtttgggtgccgcatgacacaaaaggcggaagggagatatttgacaacctatattatattGTCTGTAGAATTTGTCTGGCGATGGACAGGAAATTGTACTCCATCCGGAAGTATAATCTGGAACAGGCCTTCGAAAATTTGACCGGATTGCATTTAGACGTTGCCAGTTTACCGCGGATGCTGTGTGCGGAGTGTGCACAAAGATTGATCTCGTGTCACCGCTTCAGGAGCAAGAGTCTCCGGGCCCACGATCTCATGATGGAGATTATTAGCAAACAGAACATGatAACACTAGAAAACATTGAAACTATAAACAGGGAATATAATCATTTGGAATCGAATCTAGTTAAGAAGTTTCACCTCCCAGATCATTGTGATCTCTTCCTTGAACACACAGAGAAGGTAGAAGAATTAATAGAGACGAAAGAGATAATGAGAGACATCAATAAAGAAGTTGAGATTAAAAATGAAGTGTTCATAGGCGACGAATCGCCAGTAGACGTGAAAGACGAAATAACGAACTACTCGTCTGATGACAGTCTCCCACTGGAGAGGAAGAGAACGAAGAAGAAGGAGAAAGTGAAGCAGGCGGTAAAGAAAGTTAGGAAAGGTAAGACGCAACCGACAGAACCGAAAATTGACAGGAGAAGGAAACCGTTTCTGAATGACGATTTGAATGAAACTCTATTCACGATAACTGATCTGTCCTTCGACGAGCAAGTGGCGGAGATTGAGAAGAGAAGAGAATCGGCCAATTACAAGAACTCCGTTTTTAAGTGCACCGCCTGTTTCAAAGGGTTCTTGGATGAAGACGCTTACAATGGTCACATGACTAGGCACACAAATCAATGTGGTGACTACGAGTGTGAGATATGCAAGACTCATTTCAAACATCCCCACGCGCTGAGGAAGCACGTAACAGCCCACCACACCCAAAGGTTCAGCTGTAACCAGTGTCCCTACATCACTACGCACCGACAGACGGCCAGGTTACACGAGAGGTGGCACAAGGGAACCAAGTATAAATGTCCACATTGTCAGGATGAATTCGTTAAATTCACCACGTATATGGGTCACATACGTATAAAACACCCGTCGGACTTCGTGTGCGAGCTGTGCGGGTACTCTTTTGTCAGCGAGAAGGGGATAGAGCTACACAAGAAGTTGAAGCATCGCCTCGACAGCGACAAGGTTCCAGAGGACGGGCCGCTCTGCGAATTGTGTAATGTAAGGTTCATCTCACAAGATGCTTACCGACGTCATCTCGTCGTCTCAGCGAGACATAATACCGGTGACAAAGATTCAAACGACACCAGTAAACCGAAGAAGGGAAGGAAACCCAGGGATGTGAAGGACAGGGAGAAGAGAACCAGAGACAGGAGCAGAGAGTCAAGCGAGAAGGACAAGATGTATCCCAGTCAGCTCAGGAAAGTGGAGGGTCCAATACCTTGTGAACAGTGTGGCTTGCAGTTGGAGGACTCGAGGGCGTACCACGGCCATTTCAGGAGGATGCACCCGGACAAGAACAGAACCAACTATCCCTCGATGAAGTCGCCCTGCATGTGCGAGTTATGTGGCAGGATGTTCCAGAGCTACGCGCTTCTAAAGGACCATAGATGGGTGCACACTGGAGAGCGGCCGTTCGCGTGCGACGCGTGCGGGAAGGCGTTCCGCATGCGGCAGCGGCTCGTCGCGCACAGACGCGTGCACGCGCAGCTGCGGGCCACGTATGTGTGCGCGCTCTGCGGGAAGCACTTCTCCACGCACAGCAATCGGCAGAGGCACATGTTTATCCACACGGGGCTGAAGCCGTTCGCGTGCGAGATGTGCGGCAAGTGCTTCAAGCACGCGAGCGAGAAACGCGCGCACGTCGCGTACGTACACCTCAAGAAGCCCTGGCCGAAGCGCGCGCGCGTCAAGAGGGCAGACAGACAGATCCACACGGGGCTGAAGCCGTTCGCGTGCGAGATGTGCGGCAAGTGCTTCAAGCACGCGAGCGAGAAACGCGCGCACGTCGCGTACGTACACCTCAAGAAGCCCTGGCCGAAGCGCGCGCGCGTCAAGAGGGCAGACAGACAGGGGCAGCTGCAAAACCAGGCGGTACCATCCAGCACTGGGGAGATGGATATGGTGCAGCCGGTCTGGTCATCCTGCGACCAGAAGACAGTCTACTACAACAATATGAAGATATGA
- Protein Sequence
- MEFTNAEIRAILKFSFVKGKSARETFREINGVLGDGTLSLRTTEEWFRRFRAGENDTMDKPAGRRPVTTNTDQIMDYIELDRHVASRDIAQEMGVSNQTILNHLQKAGYKKLDVWVPHDTKGGREIFDNLYYIVCRICLAMDRKLYSIRKYNLEQAFENLTGLHLDVASLPRMLCAECAQRLISCHRFRSKSLRAHDLMMEIISKQNMITLENIETINREYNHLESNLVKKFHLPDHCDLFLEHTEKVEELIETKEIMRDINKEVEIKNEVFIGDESPVDVKDEITNYSSDDSLPLERKRTKKKEKVKQAVKKVRKGKTQPTEPKIDRRRKPFLNDDLNETLFTITDLSFDEQVAEIEKRRESANYKNSVFKCTACFKGFLDEDAYNGHMTRHTNQCGDYECEICKTHFKHPHALRKHVTAHHTQRFSCNQCPYITTHRQTARLHERWHKGTKYKCPHCQDEFVKFTTYMGHIRIKHPSDFVCELCGYSFVSEKGIELHKKLKHRLDSDKVPEDGPLCELCNVRFISQDAYRRHLVVSARHNTGDKDSNDTSKPKKGRKPRDVKDREKRTRDRSRESSEKDKMYPSQLRKVEGPIPCEQCGLQLEDSRAYHGHFRRMHPDKNRTNYPSMKSPCMCELCGRMFQSYALLKDHRWVHTGERPFACDACGKAFRMRQRLVAHRRVHAQLRATYVCALCGKHFSTHSNRQRHMFIHTGLKPFACEMCGKCFKHASEKRAHVAYVHLKKPWPKRARVKRADRQIHTGLKPFACEMCGKCFKHASEKRAHVAYVHLKKPWPKRARVKRADRQGQLQNQAVPSSTGEMDMVQPVWSSCDQKTVYYNNMKI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00958013;
- 90% Identity
- iTF_00958013;
- 80% Identity
- iTF_00958013;