Basic Information

Insect: Meandrusa payeni
Gene Symbol: -
Assembly: GCA_029286785.1
Location: JAGSMX010000012.1:5263419-5266228[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.2e-05 0.00096 19.9 0.3 1 23 217 239 217 239 0.98

2 8 2.4e-05 0.002 18.9 2.7 1 23 246 268 246 268 0.98

3 8 3.4e-07 2.7e-05 24.8 2.3 1 23 274 296 274 296 0.98

4 8 0.00012 0.0098 16.7 1.4 1 23 302 324 302 324 0.99

5 8 1.6e-06 0.00013 22.7 3.9 1 23 330 352 330 352 0.97

6 8 9.9e-05 0.008 17.0 1.1 1 23 358 382 358 382 0.99

7 8 0.15 12 7.0 2.3 1 23 388 410 388 410 0.96

8 8 8.9e-05 0.0072 17.2 0.7 1 23 416 439 416 439 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.2e-05	0.00096	19.9	0.3	1	23	217	239	217	239	0.98
2	8	2.4e-05	0.002	18.9	2.7	1	23	246	268	246	268	0.98
3	8	3.4e-07	2.7e-05	24.8	2.3	1	23	274	296	274	296	0.98
4	8	0.00012	0.0098	16.7	1.4	1	23	302	324	302	324	0.99
5	8	1.6e-06	0.00013	22.7	3.9	1	23	330	352	330	352	0.97
6	8	9.9e-05	0.008	17.0	1.1	1	23	358	382	358	382	0.99
7	8	0.15	12	7.0	2.3	1	23	388	410	388	410	0.96
8	8	8.9e-05	0.0072	17.2	0.7	1	23	416	439	416	439	0.97

Sequence Information

Coding Sequence: ATGGGAGGAAGAGAGCGGGCGGAGGTGACTCGCGAGTCACGCACGCGCGCTGCTATCGTGAGTTCACACGCGCTTCGAAACCGCGGTGGGCCGCCACGTGGTGCCTCGCCGCCACCGCGCTCGCTTGCCGCCGCCCTCTCGTTCAACCTTCAGCAGAGCCGCGGTAGTCTGTCGTATATACATTCTATGGATCCTTTATTTATAAGGAAAACCATACCCATACTCTATACATACAACATTAGTGTATTGCACGAGTCCACGAGGCTAAAACGAAAGTGGGGAGAAGTGCGGGGCTGCGGGGTGAGGCTCAGTGCGGATACGGGGTCGGCGGCCCAAACACGTGGAGGCGCGTACCGCGGCACTATCGCGTCGAAACCGGGGTACTGGCCTCCACGTGCTGTCAGAGGACATTCACTCTGCCTTGTTCCTCGCTCCTCCCTACCCGTTCGCGCCCCTTTATGGCCCTGTATGTGCATCCTGATTTTCCTGATCGCCGCATGCCGTCCACAACAGACATTGCACTGTGAACGGTCGGCGCGATTATACGTGtgccataaatattatataacacccGTTGAACAAATAATGAGTTATATACCTCATCTTAACGCCAAGATAAATCATTTGACAGGTGAAGAACAACGCATACACCAATGCGGAGAATGCGGGCTGACGCTTTCCACGCGCAGCGCGTTGACTGCTCACGCCCGCTCGCACCGCGTATCCGCTGATGCCCATCGCTGCGATGTCTGCCACAAGACTTTCGCTGTGCCGGCACGGCTTGTCCGCCATTATCGGACCCACACAGGTGAACGACCATTTGAATGTGAATACTGCCACAAGATGTTCAGTGTTAAGGAGAATTTGCAAGTGCACCGACGAATTCACACCAAGGAGCGCCCGTACCGCTGCGGCGTTTGCAACGCTGCCTTCGAGCATTCGGGGAAACTCCATCGTCACGCTCGAATCCACACCGGCGAGAGACCGCACGCGTGCCCGCATTGTCATAAAACATTCATTCAGTCGGGCCAGCTCGTGATTCACCTAAGAACACACACCGGAGAGAAACCGTATCGCTGTCCGGCGCCGGGCTGCGGAAAGGGGTTTACATGTTCCAAGCAGCTCAAAGTGCATTCCCGCACGCATACCGGTGAGCGGCCTTATACTTGCGACATTTGTCTCCGTGATTTTGGTTACAACCATGTGTTAAAACTGCACCGCTTCCAACACTACGGTGAGCGTTGCTACCGCTGCACAGTGTGTGACGGTACTTTCAACACGAAGAAGCAAATGGAAGCCCATATATACAAGGAGCATGGAGCTGAAACTCCTCGAGCGCCGACGTCGTTGCCCATTATTCCAGTAGCCGGGAATGAAAATGCTATGTGTGATATTGTAGATGTGGGTTTACCACAGTTGCCCCCGACACCACCTAGCTCTCCGCCATCGCCGCCGTGCATCATTACGCCAGCTACTACCGCGACATTGCCCCTAGCCTCCGCCCCAATTCCCACCCCATCCTTTTCACCCCCTACAACCAGTCTACATTTCACTCTCGCTCCTTCCTCCCTCCCCCCCAGAAAGCGAAAGTTTATTCCTTATTCCGATTCACTGCCCGCTCCCGTTCCTATCGTTCGCCACACTTCTGTGATACAGTTCGCACCGCCCGCCTCTGATTTATCGTAG
Protein Sequence: MGGRERAEVTRESRTRAAIVSSHALRNRGGPPRGASPPPRSLAAALSFNLQQSRGSLSYIHSMDPLFIRKTIPILYTYNISVLHESTRLKRKWGEVRGCGVRLSADTGSAAQTRGGAYRGTIASKPGYWPPRAVRGHSLCLVPRSSLPVRAPLWPCMCILIFLIAACRPQQTLHCERSARLYVCHKYYITPVEQIMSYIPHLNAKINHLTGEEQRIHQCGECGLTLSTRSALTAHARSHRVSADAHRCDVCHKTFAVPARLVRHYRTHTGERPFECEYCHKMFSVKENLQVHRRIHTKERPYRCGVCNAAFEHSGKLHRHARIHTGERPHACPHCHKTFIQSGQLVIHLRTHTGEKPYRCPAPGCGKGFTCSKQLKVHSRTHTGERPYTCDICLRDFGYNHVLKLHRFQHYGERCYRCTVCDGTFNTKKQMEAHIYKEHGAETPRAPTSLPIIPVAGNENAMCDIVDVGLPQLPPTPPSSPPSPPCIITPATTATLPLASAPIPTPSFSPPTTSLHFTLAPSSLPPRKRKFIPYSDSLPAPVPIVRHTSVIQFAPPASDLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -