Mpay007702.2
Basic Information
- Insect
- Meandrusa payeni
- Gene Symbol
- -
- Assembly
- GCA_029286785.1
- Location
- JAGSMX010000012.1:2118940-2131311[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.027 2.2 9.3 0.1 2 23 268 289 268 289 0.95 2 12 0.012 0.94 10.5 3.8 1 21 294 314 294 318 0.90 3 12 0.0029 0.23 12.4 0.9 2 23 432 454 431 454 0.94 4 12 0.00061 0.049 14.5 0.0 1 23 460 482 460 482 0.98 5 12 0.01 0.82 10.7 0.1 1 23 493 516 493 516 0.92 6 12 5.9e-06 0.00048 20.9 4.3 1 23 521 543 521 543 0.98 7 12 1.1e-05 0.00088 20.0 0.9 1 23 549 571 549 571 0.97 8 12 6.6e-05 0.0053 17.6 5.1 1 23 577 599 577 599 0.98 9 12 2.6e-07 2.1e-05 25.1 0.2 1 23 605 627 605 627 0.98 10 12 0.0036 0.29 12.1 3.7 1 23 633 655 633 655 0.98 11 12 7 5.7e+02 1.8 0.4 2 14 661 673 661 676 0.88 12 12 0.42 34 5.6 0.0 2 10 688 696 687 703 0.88
Sequence Information
- Coding Sequence
- ATGGAAGTGTTCCTATATAATTCTACAGTTTGTCGATTGTGTGGAGAAGAAAATGACAATGGAAATCTATTGTATTCAAGccaagaaaataatacaaacctTAGTGAAATTATTAACACCTATTTACCCATTAAGATACAGGTCTCAGATGATGGTCACCTACCTCGTACTATTTGTCCTGGTTGTACAATACAGTTGGAAGCAGCAGTGGAGTTTCTTAACTTGATAATAAATGGGcagAAAGTCTTAAGAGAGCTTTATAAAAGGGAAAAAGAATACAAGAAATCCTATACACCGTCCAATGAACCCGAAATTATAACtgagaaaattatttatgaaaTAAATACCAGCAATGGGGTGTATCAAATAGAACATCCTATTGCCCTTCAAGTAGCGGGATTAGAAAAGCCTAAAAGAAAAAGAGGGAGGCCACCTAAAAAACCAAAGAGTCCTGAGGAATTAGCACAGGAAGCAGCTGTTAAAGTCCAAGAGAAGAAATCTAAGAATGAGAGTCATGACACTGAAGAACCGACGGGTAAACGGCGAAGAAAAACGCCTACAAGATTCAAGGAAGTGGTTCAGGGAAAAGAACTGGAAAGAATATTCAAAGAAGAAGGTGTGACTGATGGCGAAGACAGTgacaatgataataaaaaaaaaaccacagaTCAACAAACAAAAGTCCCAGAGGCAAAGGAACCTCAAGTAATAGGACACATGGAGAAATCTGGAGAGTTAGTAGTTGTATTGAAAGGGAAGGGAAGAGGCCGTCCAAAAGgACGTACGCGCCAGACGCGTGAGCAATGCATGATCTGTGGTATGATGTTTTCAAGCATAGGACGTTATATGTCACATATCGCTCAACATGGTCCAGTACTGTATCAGTGCACACAGTGCGGTGAGACTTTCTCAACTAGACTTAGGTTTTGTGATCATCAAACTGAGACAAAGCATATCGGACAAAATATACTGCAATGCAAGGATATAACATCTAGTGAACAAGCCTCTATGAAATCTGTCAATAAACTGCCAAGAAAACCTCAAACATTAAAAGATATTGTGACTGTAGAAAATCCGGACAATGATAAAGAACCAACATCTCTATCTGAAACTCCAATAGCAGCCTTGCCTGATCTGAATGAAATACAGTTCAAGGATACGGATAAAAAAGATGACAACACTGAGTTTGTGGACATAAAACCTCAAAATGGGGAATCAGCCAATGATGGTAGTAAACCTATTGATCCGTTAGCAGAATCTGAGCAGGAAGTGCCAGAtgacaaaacaaaaatcaaatgcaATCAGTGTGATAAAGAATTTCGGAGCAGGCAAAGCAAATCTCTCCATATCAAGGCAGTGCATTTAGGCGAGAAGCCATACAAATGCACAGAGTGTGATGCGGCCTTCGGCTACCCGCGCTCGCTGGCCCTGCACGTTCTCTCACACCGCCGACACAAAGCTTCTTCTTCCAAGGGATACGCCTGTGATCTATGTGGAAAGGTCCTGAATCACCCGTCGTCGGTGGTGTACCACAAGCAGGCCGCGCACGCGGGGCAGCGCTACGTATGCGGCACCTGCGGCAAGCATTTCCGACACAAGCAGCTGCTGCAGCGACATCAGCTGGTCCACTCACAGCTGCGCCCTTTCAATTGCAAGgTTTGCAATGCTACCTTTAAAACGAAAGCGAATCTGCTCAACCATCAGCTGCTGCACTCCGGCGTGAAGAAGTTTACCTGCGAGATATGCAAGCATAAGTTCGCTCATAAAACTAGTCTGACGCTGCACATGAGATGGCACACTGGTTTGAAACCATACGCATGTGAGATGTGCGGCAAGAGCTTCAGCCAGAAAGGTAACCTGTCGGAGCACGAGAGGATCCACACAGGGGAGAAGCCGTACCAGTGCGGCTGGTGCCCGCGCCGCTTCACCACCTCCTCCCAGCATAAGCTGCACTCGCGGCGGCACGCGCTCGACCGCGCCCAGTGCGGACACTGCACCAATAGGTTCCCGTCGCGTAGTGGGTGGTCGAGCGCGGTGCGGCGCGAGGCGGGCGGCCGGCTGCGCTGCACGATCTGCGGCCGCGTGTTCCTCGACCGCAGTATGGCGCAGCGGCCAAGGCGCAGGCTCGCCCCACAACATGACaagAATGTAAAGCAAATGAGTCTCCTAATGCCGGACACCGCCCAAGTTATAAACGACCTGAAGGTGGAATCGGACCAGGTGGAGGACACGGAAGAGAGAGTTATTTACATCACATACGACATGGACGAGCAGACGCCCTCGCTGCACATACTGGGCCGGGAGCAGGCTATAAAATCCTACAAAGATGTCGTTTCACAGGAGCTTTACGCTGGTTCGTCACTGCTCGTTCCGCAGCCGGCCCTCGCAGAATTGGAACTAGACCAACTCGAGGATTCTTCGCAAGACCAACAGTTGCATCAGTTAAACGAGGAACTGCCTGAACAGCTGGGGTTGGTCAACGGTTCACGAGACCACTTACCGGTGACAGATGAACATGGCAACCCGCTCCACTTCACTATGCAGGACGGCACCCGGCTTGCAATTACCTCAGTAGATGGCAAGTCTTTGCAGGTTATTACGCAAGATGGACAGACGATACCCGTGGAAATCAACGGCTTCGCTGACGAGGCGGAAGTAGAAGGCCCGGAGACAGTCGTGCACCAGCTGAACTTGCAGAAAAGTGTCGATTGCAAGGGTTCCACGCCGCTCAGTCAGTACTACACGCTGGTTTAG
- Protein Sequence
- MEVFLYNSTVCRLCGEENDNGNLLYSSQENNTNLSEIINTYLPIKIQVSDDGHLPRTICPGCTIQLEAAVEFLNLIINGQKVLRELYKREKEYKKSYTPSNEPEIITEKIIYEINTSNGVYQIEHPIALQVAGLEKPKRKRGRPPKKPKSPEELAQEAAVKVQEKKSKNESHDTEEPTGKRRRKTPTRFKEVVQGKELERIFKEEGVTDGEDSDNDNKKKTTDQQTKVPEAKEPQVIGHMEKSGELVVVLKGKGRGRPKGRTRQTREQCMICGMMFSSIGRYMSHIAQHGPVLYQCTQCGETFSTRLRFCDHQTETKHIGQNILQCKDITSSEQASMKSVNKLPRKPQTLKDIVTVENPDNDKEPTSLSETPIAALPDLNEIQFKDTDKKDDNTEFVDIKPQNGESANDGSKPIDPLAESEQEVPDDKTKIKCNQCDKEFRSRQSKSLHIKAVHLGEKPYKCTECDAAFGYPRSLALHVLSHRRHKASSSKGYACDLCGKVLNHPSSVVYHKQAAHAGQRYVCGTCGKHFRHKQLLQRHQLVHSQLRPFNCKVCNATFKTKANLLNHQLLHSGVKKFTCEICKHKFAHKTSLTLHMRWHTGLKPYACEMCGKSFSQKGNLSEHERIHTGEKPYQCGWCPRRFTTSSQHKLHSRRHALDRAQCGHCTNRFPSRSGWSSAVRREAGGRLRCTICGRVFLDRSMAQRPRRRLAPQHDKNVKQMSLLMPDTAQVINDLKVESDQVEDTEERVIYITYDMDEQTPSLHILGREQAIKSYKDVVSQELYAGSSLLVPQPALAELELDQLEDSSQDQQLHQLNEELPEQLGLVNGSRDHLPVTDEHGNPLHFTMQDGTRLAITSVDGKSLQVITQDGQTIPVEINGFADEAEVEGPETVVHQLNLQKSVDCKGSTPLSQYYTLV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -