Mpay019376.1
Basic Information
- Insect
- Meandrusa payeni
- Gene Symbol
- -
- Assembly
- GCA_029286785.1
- Location
- JAGSMX010000037.1:1595023-1598532[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.02 1.6 9.8 4.8 1 23 138 161 138 161 0.96 2 19 0.00018 0.015 16.2 1.1 1 23 170 193 170 193 0.96 3 19 0.027 2.2 9.4 0.4 2 23 206 228 206 228 0.97 4 19 0.0003 0.025 15.5 1.3 1 23 237 260 237 260 0.97 5 19 4.6e-05 0.0037 18.1 1.4 1 23 272 295 272 295 0.96 6 19 0.00095 0.077 13.9 0.9 2 23 324 346 323 346 0.96 7 19 0.00035 0.028 15.3 1.3 2 23 356 378 355 378 0.96 8 19 0.027 2.2 9.3 0.7 3 20 384 401 383 403 0.93 9 19 0.00015 0.012 16.5 0.1 2 23 408 430 407 430 0.96 10 19 0.013 1 10.4 0.4 3 23 440 461 439 461 0.96 11 19 0.011 0.88 10.6 7.4 1 23 466 489 466 489 0.93 12 19 8.8e-05 0.0071 17.2 1.7 2 23 501 523 500 523 0.96 13 19 0.00018 0.015 16.2 0.4 1 23 548 571 548 571 0.92 14 19 9 7.3e+02 1.4 1.3 2 23 578 599 577 599 0.74 15 19 0.16 13 7.0 1.4 2 23 606 627 605 627 0.96 16 19 9.8 7.9e+02 1.3 1.5 3 23 635 657 633 657 0.91 17 19 9.4 7.6e+02 1.3 0.9 2 23 665 686 664 686 0.90 18 19 0.014 1.1 10.3 0.2 1 23 693 715 693 715 0.97 19 19 0.16 13 6.9 2.0 1 23 721 744 721 744 0.96
Sequence Information
- Coding Sequence
- atggCCAATCTAGTTGGTGTTGATTtgtcaataaaaagaaaagatcCCACATCTTTCTTGCCAGAGGAGCCAATGTCATATGAAATAAAAcctaagaaaaagaaaaaaaagaaacaccGGCAGGTAGATCCATTTAAGGATATAGAAGAAAATATTGCAGTGCCAACAGAAATAGCTCTCGATCCAGAAGTGAACATTAAAGTTGAGAATATTGAAGTGGAGTTGGATTTTAATGATttcACAAACGACAACGGGCTGATGGTGGAAGGTCCTCAGAGTGAAGACAGTCAAGAGCCAATAGTGAAACTAGAGCAACAAACGCGTGAAGCTGTCATTTTAACCTTTGAGAGTGTAATCAGTGATAAAACAGTGTTCGGCTATAACCAAAGTGAGACTACTATAGAACCAATGCACATTTGTAAAGTTTGCCATCTTGTTTTCCAATCCATAAAGACTCTACAAATGCACCAAAAGAGAAAGCACAAAGTGTTCAGACGGTCATTTAAACACATATGCGATCAGTGTGGAATGTCGTACGAGAGAAAAACAAGTCTAGTTGCGCACGTGAAGAGAAAACACGGCCCTAACTCGATGCCTGAAGATAGAGAAGAAAGGACATGTGAGATATGCGCTCTAGTGTTTAAAGGAATGCCAAGATTACGTATGCATATGCGGAGGAAGCACGGATCATTCGAAGACTCCTTTCGACACGTTTGCAAAGATTGCGGGCTAACGTATGAAAAATATAGAAGTTTAATAGTCCACATACAAAGAAAGCATAAACTGGACACGAAACCCGTTGTCAATCAATGGTTTAACTGTCCCTTCTGTCCGAAGGTCTTCACAAAACGCGAGACCTACGCCAGACACGTCCAACGGAAACATCGTATCAGCGACGAAGATACTTTGAAACAGGAAAACGATAGAAATTTATTAGAGAGCACCAAGAACGAAAAGACCGGGGAAATATCCTGTAAAGAGTGTCCACTATTGTTTTCTTCCTTGAATTTTCTCAAATTACACATGAGAAGGAAACATAACGCTTTGAAGGAAGATTTCAGACTGAAATGTAGGATTTGTAATCTATCATACGATAAGATTGAAAGCTTAAAGCGACATATTAGAAGAAAACACGACAAAGGATCGTTTTGTGAAGTGTGCAATAAACAATTCGATACTAGAGAGTTGTATTTGAATCATACACACGTTAAAATTGTTAAAGAATGCTCTATATGTGGTTTGATATTTGCGTCTAAAGGCGGCTTGGGAAAACATTTGCGGTCTACCCACAAGGTTGATTCGCCTAAAACCGTATTCTGTAACTTGTGCAATGAAGGATTCCCCGACAAGAGACAGCTTAAGCCACATTATATGAAAGTTCATTTAAACGCGTCATATACTTGTTGTCATTGTAAGAAAGTGTTTAAAGCAAAGGAGAGTTATAGGCGCCACGTTTTGTTCAAACATCCTTTGATGAGTGTTAATcgtaatcaattacaaaaatgcGAACATTGTACGCAAACGTTTCCGGACGAAGTGGAACTGTGTCGACATATCAACGTGGCTCACGGAAAACCGACGGACGTTCCGAACACAGAAGTAGTTATAATAAAGAAAGAGGAAATGGATTTCAAAGAATCTTTCCAATGTTCAAAATGTCCCGAGTCTTACGTAACTTGGGAGGAACTTCGGATGCATTTTGAACAAAGCCATCATACAGTCGAGGACACACAGTGTCAGATTTGCGGCGAATTAATACCCGTGAACGAGCTTCAAAAGCACATAAAGCTAGCACACACGGAGGAGACAGTATTGAAATGCAAATACTGCGAATTTGAAACATCCTTACGGGCGAGCATGACCCAACACACGCTTAGACATAAAAATGCGACGACTTTAAACTGTCACATCGACGGTTGTAGATATAAGACGTTTTACGAAGGTGCGATGGTTAGACACAAGAAGAGGCACACATTGCAGGGGGTTAAGTTGCAGTGTACGCGATGCTCGTTCCAAACGATGAACAAATACGTGTTGAAGTATCACGAGGAGGCGCACATGACGGGCGTGAAGAAGTACGTATGTGACCAGTGCGACTACGCAACGTTTCTGCCAGCGAATCTAGTCCAGCACCGGTACAAACACTCATCGGAGAAGAGATTCAAGTGCGAGGTGTGCCCCTTCGCGACCAAGTACAACACTTCCTTGCGATTTCACGTCAAGAAGAAACATTGTGATCTCCCATCGTTCGGttaa
- Protein Sequence
- MANLVGVDLSIKRKDPTSFLPEEPMSYEIKPKKKKKKKHRQVDPFKDIEENIAVPTEIALDPEVNIKVENIEVELDFNDFTNDNGLMVEGPQSEDSQEPIVKLEQQTREAVILTFESVISDKTVFGYNQSETTIEPMHICKVCHLVFQSIKTLQMHQKRKHKVFRRSFKHICDQCGMSYERKTSLVAHVKRKHGPNSMPEDREERTCEICALVFKGMPRLRMHMRRKHGSFEDSFRHVCKDCGLTYEKYRSLIVHIQRKHKLDTKPVVNQWFNCPFCPKVFTKRETYARHVQRKHRISDEDTLKQENDRNLLESTKNEKTGEISCKECPLLFSSLNFLKLHMRRKHNALKEDFRLKCRICNLSYDKIESLKRHIRRKHDKGSFCEVCNKQFDTRELYLNHTHVKIVKECSICGLIFASKGGLGKHLRSTHKVDSPKTVFCNLCNEGFPDKRQLKPHYMKVHLNASYTCCHCKKVFKAKESYRRHVLFKHPLMSVNRNQLQKCEHCTQTFPDEVELCRHINVAHGKPTDVPNTEVVIIKKEEMDFKESFQCSKCPESYVTWEELRMHFEQSHHTVEDTQCQICGELIPVNELQKHIKLAHTEETVLKCKYCEFETSLRASMTQHTLRHKNATTLNCHIDGCRYKTFYEGAMVRHKKRHTLQGVKLQCTRCSFQTMNKYVLKYHEEAHMTGVKKYVCDQCDYATFLPANLVQHRYKHSSEKRFKCEVCPFATKYNTSLRFHVKKKHCDLPSFG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01154433;
- 90% Identity
- -
- 80% Identity
- -