Mpay019246.1
Basic Information
- Insect
- Meandrusa payeni
- Gene Symbol
- -
- Assembly
- GCA_029286785.1
- Location
- JAGSMX010000036.1:1253311-1258558[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.00071 0.058 14.3 0.9 1 23 257 280 257 280 0.96 2 10 0.026 2.1 9.4 0.2 2 23 307 329 306 329 0.95 3 10 3.3e-05 0.0027 18.5 0.3 1 23 352 374 352 374 0.98 4 10 1.5e-05 0.0012 19.6 0.4 1 23 378 401 378 401 0.97 5 10 0.0055 0.45 11.5 0.4 1 23 406 429 406 429 0.94 6 10 0.026 2.1 9.4 1.1 1 20 435 454 435 458 0.84 7 10 2.7e-07 2.2e-05 25.1 2.6 1 23 465 488 465 488 0.98 8 10 0.00079 0.064 14.2 4.0 1 23 494 516 494 516 0.98 9 10 3.3e-07 2.6e-05 24.8 1.6 1 23 522 544 522 544 0.99 10 10 3.9e-05 0.0031 18.3 1.8 1 23 550 572 550 573 0.95
Sequence Information
- Coding Sequence
- ATGGAGAAAAGAGATGGCTCGTGCCGGTTTTGCTTAGAAAAGGGTCAGCACCAAGATATCTTTATGGAATACTACTGGAACGGCAACAgggaaatatatgtaaatataataatggattgcttcaatatttatCTGTCAACCAACACTAAACTGAGTTCACTGATCTGCTTATCATGCGTACAAAGGCTCCGGAACGCGAACAGCTTCCGTACGATGGTGGTTAACTCCGAGCAGGACATGTTAAACGCAATCACTGACAAGGagactatttttataaatgTGCCAGTAAATAACCATACTTTGGAGACAGTTGATACTATCAAGACTGAGGGTCTGATGGAGGTGAAAGAGGAAAGTGAGGATAAGGAACTGCCTGTATCTATGGAGTGCGTTTCTGATGATATTCCAGACAATTATGAGGATGTTTGCgATGTTTCAACAAAAGATGACCCGGAGACGTCAGAAGAGGAAGCTGTGAGCGGTGTGGCCGCGCTGATTGCGAGGTTCCCAAGGGACGAATTGAAACTACCAACTCGAGACTCCCTGCAAATTTCCTGTCCAGATTACTTCCGCTACCTTGAACAATTAAAAgGTAAAATAGTCTTGCCCAGAATGATCGCGAAGCTACTCGATTCTGACGACGTGGACGCAACACTAGTGACACGCAAGAAACTGTACATATCGGAGAAGATGGGTCACATATTGAATACATCCACACTACTGGAGAACAGCAACGCGACCCCATTCAAGAATAGAAACCGTGCCGGCTTCCCGTGCTTCTACTGTCGCAAGATCTTCGAGAATCTGGACAGATTGCGAGAGCACCAGATAAAACTGCACAAGAAGTCGGAGATCAAGAAGATCCTGACAACGTACGGAGCTGAATGCTTCGTTGTCTACGTAGACGTGACCGATCTGACCTGTACTATATGCAACGAGAAAGTCCCGAACGTGAACGGACTTAAGAGCCACTTGACCAAAAACCACAAGAAGAAGTTCCACACCGAGTTCACGGATAGAGTGATACCCTTCAAACTATCACAGGATAACATATTCGAGTGTCAGGTTTGCGGGTTCAGCTTCGAAACGTTCGGCTCCATAGAACGACACATGAACATCCACTACAGGAATTATGTCTGCGAGGAGTGCGGCACTGGTTTCGTCACCAAATACCGTCTTAGGGTACACACGAAATCCCTCCACTCCGGCGGCAATTTCCCCTGCGATATATGCAAGAAGGAATACTCCACGCTGCAGAAGCAAAAGAACCACGTGGCCTCCGTCCACATGAACATGAAGCGCTTCAAGTGCCCCAAGTGTCCGGAGAGGTTCTCTGAATACTTCCGCAGACAGAAGCATCTGGTCGATGTCCACGGGGTGGCACCTTTGAGGTACAAGTGCAACGTGTGCGATAAATCTTTCGACAGACGGTATACGCTGTCCAGGCATTTGAAGAGAGATCATCTGGAGGAGAGGGACTATCAGTGTAGCATGTGCTCGTATACGTGTTTCACTAAGAACGAACTGAGGGTACATATGGTGAAACACAATGGAGAGAGGATATACGAGTGTTCGGTTTGCAAGAAGTCCTACGCTAGGAAGAAGACATTGAAAGAGCATATGCGGATACACAACAACGATAGGAGATTCGCTTGTGCGGTTTGCGGGCAGGCTTTCGTGCAGAAGTGCAGTTTGAAGGGGCATATTAAGACACACCATATAGAATATAGTATACAGTAA
- Protein Sequence
- MEKRDGSCRFCLEKGQHQDIFMEYYWNGNREIYVNIIMDCFNIYLSTNTKLSSLICLSCVQRLRNANSFRTMVVNSEQDMLNAITDKETIFINVPVNNHTLETVDTIKTEGLMEVKEESEDKELPVSMECVSDDIPDNYEDVCDVSTKDDPETSEEEAVSGVAALIARFPRDELKLPTRDSLQISCPDYFRYLEQLKGKIVLPRMIAKLLDSDDVDATLVTRKKLYISEKMGHILNTSTLLENSNATPFKNRNRAGFPCFYCRKIFENLDRLREHQIKLHKKSEIKKILTTYGAECFVVYVDVTDLTCTICNEKVPNVNGLKSHLTKNHKKKFHTEFTDRVIPFKLSQDNIFECQVCGFSFETFGSIERHMNIHYRNYVCEECGTGFVTKYRLRVHTKSLHSGGNFPCDICKKEYSTLQKQKNHVASVHMNMKRFKCPKCPERFSEYFRRQKHLVDVHGVAPLRYKCNVCDKSFDRRYTLSRHLKRDHLEERDYQCSMCSYTCFTKNELRVHMVKHNGERIYECSVCKKSYARKKTLKEHMRIHNNDRRFACAVCGQAFVQKCSLKGHIKTHHIEYSIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00197547;
- 90% Identity
- -
- 80% Identity
- -