Mpay020036.1
Basic Information
- Insect
- Meandrusa payeni
- Gene Symbol
- zfh1
- Assembly
- GCA_029286785.1
- Location
- JAGSMX010000041.1:304907-314256[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.001 0.082 13.8 0.3 2 21 168 187 167 188 0.94 2 28 1.1 85 4.3 1.0 1 23 221 244 221 244 0.95 3 28 4.6e-05 0.0037 18.1 1.2 2 23 250 271 249 271 0.95 4 28 0.006 0.49 11.4 3.4 2 21 275 294 275 295 0.94 5 28 0.00035 0.028 15.3 0.8 2 23 335 357 334 357 0.95 6 28 0.048 3.9 8.5 1.7 1 23 389 411 389 411 0.98 7 28 0.002 0.16 12.9 0.5 1 23 417 440 417 440 0.96 8 28 0.0018 0.15 13.0 0.3 1 23 449 472 449 472 0.95 9 28 0.28 23 6.1 5.2 1 20 481 500 481 502 0.94 10 28 0.003 0.24 12.3 0.2 3 22 638 657 638 657 0.95 11 28 0.98 79 4.4 1.0 3 23 663 683 662 683 0.94 12 28 0.35 28 5.8 1.4 3 23 690 711 688 711 0.96 13 28 0.00039 0.032 15.1 0.6 1 23 716 738 716 738 0.95 14 28 6.3 5.1e+02 1.9 3.9 1 21 741 761 741 762 0.93 15 28 0.0002 0.016 16.1 4.2 1 23 774 797 774 797 0.96 16 28 0.00014 0.011 16.5 2.6 1 23 803 825 803 825 0.96 17 28 2.9 2.4e+02 2.9 1.3 1 23 859 882 859 882 0.90 18 28 0.00051 0.041 14.8 0.5 1 21 890 910 890 911 0.92 19 28 4.9e-05 0.0039 18.0 1.4 2 21 1019 1038 1018 1039 0.94 20 28 7.1 5.8e+02 1.7 0.1 3 23 1046 1067 1045 1067 0.92 21 28 0.15 12 7.0 0.3 3 23 1074 1095 1072 1095 0.92 22 28 0.00013 0.011 16.6 0.1 2 23 1101 1122 1100 1122 0.96 23 28 0.98 80 4.4 1.0 2 20 1126 1144 1126 1146 0.91 24 28 8.8e-05 0.0071 17.2 0.7 1 23 1172 1195 1172 1195 0.92 25 28 0.0018 0.14 13.1 0.8 1 23 1201 1223 1201 1223 0.92 26 28 0.1 8.4 7.5 0.1 1 23 1229 1251 1229 1251 0.97 27 28 0.061 4.9 8.2 0.8 1 23 1257 1280 1257 1280 0.94 28 28 0.0012 0.097 13.6 0.3 2 23 1287 1309 1286 1309 0.94
Sequence Information
- Coding Sequence
- ATGAGTCGGCAAGTGAACGTAAAAGCCTTAGTTTCGCACGTAGTGCGAGGAGACGGCATAAATAAATGTAGAATTTGCATGGGGGACACATCGGAGGGCCAAGTATTTCTTGGCGATACGGTATTGTTGGATGGAGAACAACCCGTGACGTTATCGGAGCTATTGGAGACCATAACAGGAGTTGAGGTGCCGATCAATGAAGAACTGCCAGTCAGCCTGTGCTCAATTTGCTCAGTCTCCGCTCTAAGAGCAGCTGACTTCAGGACTGTCTGCCGTCAAGCAGCCCGAAATTGGGAGTCCATGTTGGAGCTACTCAGCAATCTGACTGACAATGAGAACAAAACCAAAACTTTATTTGCAGTCATGGAGACAAATAAGATGGTTTTAATCACTGATTGTGATCATATGGTGGGCACAAAGTCAGCAGCTAGGAGACTTGCTCAGAGATTGAAGGAAATGGAGATAACAGAAACTGTTAAAACACTTATAAATCACCCACTTCAGTGTCCTGAATGTGGCAGGAAATGTCCAAATGCCTACCTTTTGTATCAGCATTTAAAGGAATCTACAGATTTCAAGCGAGCCTGTTACATTTGTGCTAAAATAATGACCCGGGATGAGTTGGTGGTACATTTGAGTGAAGAGCACAGCCGCAAGCCGTTTGATTGTAAAAAATGCCCAGCATTACTGCCGTCATACAAGCAATATGTACATCACTTACGACAGGCCCATTCTCATGGCTCCTGCACCTGTGGCGACTGCGGTAGAACATTCAAAACTTCCAATGCATATCGAGCACATGTCTCCATCCATTCTGTTAGAACATGCCCTAGCTGCGACAAGATTTTCCGCAACCAGGCCTGTTTTAGGCATCATGTGAAGAAATGCTGTAATTTAGACAATAGACAAGGTGTGCGCAAGGGAATGACCATAGaggtgaaaaataaaaagaccgATAAGAAAATAATGGTTGGATTACGCGGGAGGACGGATAGGGAGTGTATATGTGACTACTGCGGTAAAAGGTTTTCTGGGAAGAAATATATATCTGCACACATACAGATCGTGCATACGAAGAGTACGCACAGGCCATGCGGCCACTGCGGCAAACTGCTCGCAGCCGCACATATGACGGAGCATGTTAAATACCACACAGAGCGGAGCTACAAATGTGGACATTGCAATAGCGTTCTAAAATCCAAACTAGGATACATCCAGCACTTACGTCTTCACAGCGGCGAGAAGCCTTACTCATGTTCATATTGTGGGGAGTCGTTCTCGGCTTCGTCCAGACGTTCGGAGCATGTCCGAAGGGCTCACAGAAGCTTGGACGCTGTTCTTAAACATGCATGTTCTCAGTGCCCCGCTGTGTTCCGTGCCCCTTACTTGCTTAGGAAGCATGTCACGACTGTACACAATCGCGACGAGGGGGATCCTCTCTTTGAATGTTTTACATGCCATGAAAAGTTCAGTAGCTGCCGTGGTCTTTTGCATCATACGGAGCGTTGTATcagtgcgcggggcagagtaccgcccacgcccccttcactcccctgtgacacctTTTTCGACGTCTGCGCATTATCGGTGGAGGAGGAGCAGCACTTGCCGCGTGGCGTTTGCTCCATATGCACAAAGATGGCGCTAGCAGCAATACATTTCCGAAAGGTCTGCCTGGAGTCGCGCAAGGAGTGGGCACACGCCGCCAACTGTCTAGCACACATCTCCACTCCACAAGCGGAAGATAAAGCCTTCTTCATAATCTACAAAGACTCCAGCATCCTCAAAGAGCAGAATGAAGTGCCAACAACACAACACGCCGTCCTTACACTAAATAAAAGATTTCAACCACAACAAACCATTAAGAAATCATTGCCAAAGGTCAAATCACTGGAAGGCGTACGGTGGGGATGCGAAGACTGTGGCAAGGAATTTCGACTGCTCACCTCTTTAAACTTACATTTGAAGATGACAACGAAAAGAGTTTGCTTACTTTGTGGGATAATCGTTAGAAAGGAGAAGTTGCATCAGCATATCAAAAAATCACATAATATCCACGTGGTCCATTGCACAACCTGTCACAAATTGTTCAACGAAGATATAGGATTAGAGTACCATATCCAAACTGCCCATAGCATTCTCTCCCACGTTTGTCAAGTATGCAATCGCGGTTTCGTGAACGAGAGGGCGTTGCGGTCGCACATGTATGCGCACACGCTATTCAATTGTTTATCATGTAACAGCAGCTTCGATAATCGTAGGTGTTACAAATACCACATTCAACGCTGCAAGGGTTCCAAGAGACCTCCCAAATCCGTATACGAGTGCCATGACTGCGGAACCAAATACATAAAGAAGGGATCCCTGAGGACCCATATTCAACACAAACATCTACACGTTTTGACCTTCATGTGCCATGAATGCGGTAAGAGGTGTCCAACTCTCGGCCATCTAAGAGCTCACGAAGCTATCCATATGAGCAAGAGAAAAGTTTTCCAATGTTACTGTGGGGCGAAGATGAAGACGGAGCTTGGTTTCAACCTTCACCAGAGAATTCATTCGGGTGAAAAGCCGTACGAGTGCAAACAATGCGGTGACAGATTCCTATCTTCCTCAAGACGCCTAGATCATATTAAGAGACGACACACGAGCGTCAAAGACATGCCACACCCGTGTACAAAGTGCTCGGCCAGTTTTATCAGGCCGTCATTGCTTAAGAAACACTTTCAAGTAAAAGAAGAAGCTTTGTGTCCCCGTGGTGTCTGCGTGACTTGCACAGACACAGCCATCAACGCTTTCGAGTTCCGAGTCCTGGTGGTCAACTCGCAGAAAATCTGGTCCAACTGCCTCATCGGTCTAGACAAGGCCAGTGATACCAATAAAACCCCACATTCTTTCTACGCCTTGATGAGAGAAGATCTGTCTCTTCTATCAGTGAAAAATTTCAACGGCGACTCCAAAACTCTTCTGAACCATTTAATTAACCGTctgacaaaaaagaaaaatgcacCCGTGGAAAAGAAGCCACGAGCTGCGCGCTCCGGCCCGCCGTGCAAATGTACCGATTGTGGGAAAAACTTCGTCAGTCCATACTATTTAACTATGCACCTAAAAAACAGCGGCCGGAAAGAAGCCTGTGCTTTATGCGGCACTATGGTATTCAGGGGCAAGGAAATGAAGGAGCATCTTCAGGCAACCCACCAGAAGAAGGTTCACCTTTGTTCAGACTGTCCGATGGTATTTAACGCTGAGCCCGAGATGAAGAAACACGCGAAATGGTCTCACAGACCAGGAGCTCTGACTTGCGGTGATTGCGGAAGAACCTTTCCGAGAAAAGGCTCCTTCGATGTTCACGCTCAAATGCACGCAGTCAGGACGTGTAGAGCTTGCGGTGTTCAGTTTACAAACCGTGCATGTTACAGGGTGCATCGCTCTAATTGCGAGCCCGAGGCGAAACCCGACAGCAAAAGTGTGCCTCGAAGCCGCCGTTCCAACATACGAGATCCGGCAACATTCATTTGCGATTATTGCGGCAAAACTTACCATTCAAGGCCGCAGCTCAAAAATCATATAGTCTGGATCCATATGGATATAAGACCACACCAGTGCCAATGGTGTGGCAAGAGGTTCTACACTCCGACTCGTCTGGCGGAACACAGTGTTGTTCACACGCGTGAGAGAAAGTTTGAGTGTGACATTTGTGGCGCGAAACTCGTTTCTAAAATGGCGGCTGTTTACCACAGACGAAGGCATACGGGCGAGAAGCCGTATAAGTGCGATGCGTGTGGGGAGAAGTTTATATCTTCGTCCCGCAGGTCTGAACACGCGAAGCGGCGACACGGTTTAGGTACGAGGTTGCAGTGCATGGAATGTCCAGCTACCTTCGTGAGAGTTCATGAGTTGAAAAAGCATATAGGGAAAGTACACGGGACTCAAAACTCCCAGTTACCGGTCAAACCTGGCAGATAG
- Protein Sequence
- MSRQVNVKALVSHVVRGDGINKCRICMGDTSEGQVFLGDTVLLDGEQPVTLSELLETITGVEVPINEELPVSLCSICSVSALRAADFRTVCRQAARNWESMLELLSNLTDNENKTKTLFAVMETNKMVLITDCDHMVGTKSAARRLAQRLKEMEITETVKTLINHPLQCPECGRKCPNAYLLYQHLKESTDFKRACYICAKIMTRDELVVHLSEEHSRKPFDCKKCPALLPSYKQYVHHLRQAHSHGSCTCGDCGRTFKTSNAYRAHVSIHSVRTCPSCDKIFRNQACFRHHVKKCCNLDNRQGVRKGMTIEVKNKKTDKKIMVGLRGRTDRECICDYCGKRFSGKKYISAHIQIVHTKSTHRPCGHCGKLLAAAHMTEHVKYHTERSYKCGHCNSVLKSKLGYIQHLRLHSGEKPYSCSYCGESFSASSRRSEHVRRAHRSLDAVLKHACSQCPAVFRAPYLLRKHVTTVHNRDEGDPLFECFTCHEKFSSCRGLLHHTERCISARGRVPPTPPSLPCDTFFDVCALSVEEEQHLPRGVCSICTKMALAAIHFRKVCLESRKEWAHAANCLAHISTPQAEDKAFFIIYKDSSILKEQNEVPTTQHAVLTLNKRFQPQQTIKKSLPKVKSLEGVRWGCEDCGKEFRLLTSLNLHLKMTTKRVCLLCGIIVRKEKLHQHIKKSHNIHVVHCTTCHKLFNEDIGLEYHIQTAHSILSHVCQVCNRGFVNERALRSHMYAHTLFNCLSCNSSFDNRRCYKYHIQRCKGSKRPPKSVYECHDCGTKYIKKGSLRTHIQHKHLHVLTFMCHECGKRCPTLGHLRAHEAIHMSKRKVFQCYCGAKMKTELGFNLHQRIHSGEKPYECKQCGDRFLSSSRRLDHIKRRHTSVKDMPHPCTKCSASFIRPSLLKKHFQVKEEALCPRGVCVTCTDTAINAFEFRVLVVNSQKIWSNCLIGLDKASDTNKTPHSFYALMREDLSLLSVKNFNGDSKTLLNHLINRLTKKKNAPVEKKPRAARSGPPCKCTDCGKNFVSPYYLTMHLKNSGRKEACALCGTMVFRGKEMKEHLQATHQKKVHLCSDCPMVFNAEPEMKKHAKWSHRPGALTCGDCGRTFPRKGSFDVHAQMHAVRTCRACGVQFTNRACYRVHRSNCEPEAKPDSKSVPRSRRSNIRDPATFICDYCGKTYHSRPQLKNHIVWIHMDIRPHQCQWCGKRFYTPTRLAEHSVVHTRERKFECDICGAKLVSKMAAVYHRRRHTGEKPYKCDACGEKFISSSRRSEHAKRRHGLGTRLQCMECPATFVRVHELKKHIGKVHGTQNSQLPVKPGR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -