Mpay019237.1
Basic Information
- Insect
- Meandrusa payeni
- Gene Symbol
- -
- Assembly
- GCA_029286785.1
- Location
- JAGSMX010000036.1:1197562-1201170[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.0056 0.45 11.5 0.7 1 21 82 102 82 103 0.95 2 19 0.0014 0.11 13.4 0.2 2 23 173 194 172 194 0.97 3 19 0.004 0.32 12.0 0.2 1 19 198 216 198 218 0.95 4 19 0.097 7.9 7.6 0.9 1 23 225 248 225 248 0.89 5 19 0.029 2.3 9.3 4.7 1 23 254 277 254 277 0.97 6 19 1.1 92 4.2 4.5 2 23 284 306 283 306 0.93 7 19 0.0012 0.095 13.6 1.4 1 23 311 333 311 333 0.97 8 19 1.8e-06 0.00015 22.5 0.6 1 23 339 361 339 361 0.97 9 19 0.0011 0.093 13.7 1.3 2 21 365 384 364 385 0.92 10 19 5.9e-05 0.0048 17.7 0.5 1 20 425 444 425 446 0.95 11 19 9 7.3e+02 1.4 1.0 3 23 475 495 474 495 0.94 12 19 0.0067 0.54 11.2 0.2 2 23 518 539 517 539 0.97 13 19 0.0036 0.29 12.1 0.2 1 23 543 565 543 565 0.96 14 19 0.015 1.2 10.1 1.4 1 21 570 590 570 593 0.74 15 19 0.004 0.32 12.0 0.9 1 23 599 622 599 622 0.95 16 19 0.00056 0.045 14.6 0.5 1 23 629 652 629 652 0.98 17 19 4.6e-06 0.00037 21.2 0.4 3 23 661 681 659 681 0.97 18 19 2.3e-06 0.00019 22.2 0.3 1 23 687 709 687 709 0.97 19 19 0.00035 0.028 15.3 0.3 2 23 713 735 712 735 0.96
Sequence Information
- Coding Sequence
- ATGTACGATAGAACGGCCCTCGGATGTCTGacgtgtttttttgttttaggcATCCCTGTACAAAGAGAAAGAGAATCCAATGTAGATGGAGTACAGGGCATTAACAAAGTACAGACGAAGAAAGTTTGGAAGAAGAAGCGGACGCTGAAAAAAGCGACAGTCCCTAGAACGGCAATGATAACGAATGCCGGAAACATTCTTAAATGCTGGACTGTGTGCCCATTTAAATGGCGACAGAATAGATTTAAATGCGCATATTGTAACGAGGGCTTCTCCCTACCGTGTGAGTTGAGGGAACACTTTAGAGCGTGCTCTGAGCTTACCGATGATTTATTCCGTCGTTTGAAAAAGACTCCTCTAATCAAGGTCGATGTCACTGGCGCAGTCTGTCGCTTTTGCTCTTGCCCATTCCCCGGTGTCACAGAGATGCACCAACACGCTGTCAAGCACGGCTTCGAATTCGACGCTAGCGTCAACAATGGCATCATTCCTTTCGCCTTGGACCACGAGCTCTGGCGTTGTGCAATGTGCGATCAAATCTTCAGCGTATTCTTCGAACTTGACAAGCACATGAACGTTCATTACGAGCCATTTATCTGCGACACGTGCGGCAAAAGTTACATGACCGCTATGAGACTGAGGAGGCACTTTGATTGTCACACAACGGGCACGTTTCCGTGCGATCTCTGCGATGAAACTTTCACGCTACGCACCAAGAGATACCAGCACAAAGCTCGAGTGCACTCCAAGTTACCGCGGTACGTTTGCCAGCACTGCAACGTCCGTTTCCATCGTTACGATGACAAGCTGAAGCATTTGCGTTTAGAGCACAAGGAGATTGTGCCGATCAAATGCGTACACTGCCACCTCACCTTCGAAAATACGAACAAGCGACGCACCCATCTATACTCCGTGCATATGCATACGAAATTCAAATGCACGTACTGCGAGGCGAGCTTCGGAACTCGGACTCGTTTGAGGAACCACGTGGTGAAACACACCGGCGAGAGAAGGTTTGCGTGTAACATATGCGAGAAGAAGTACACGAGGAGCGCATCACTCTGGAATCATCTCAGATCTCACGACTATTGCACCTGCAAGTTCTGTGATGTTATGTTCAACCGCAGATCGCAGCTTGCGTTGCATTTAATCAAGGAGAAGCGACGCTATGTAAGGAGCGCCAGGGCAGAAGCTAGGGTTGTTACTAAGAGAAATGCCAAAACACTTTTGGAGTGCTGGTCTCTATGCCCTTTCAGATGGCAACGGAACCATTTCAAATGCGCCTACTGCGAGGAGAGCTTCATTCAGTGTAGCGACCTTAGGAGGCACGTTGCTGAATGCTCCGCTAAGCATAGCGTCAGCGATATTTACAGCAAATTCAAGGAAATGTCACTCATCAACGTTGACGTCACCAATGCTTTATGTCGCCTTTGTAGATGCCCCTATTCCAGCATCGTGCAAATGCGCCAACACGCAATCCAGCACGGATTCACCTTCGACACCACACAGCCGGACGGTGTCCTGCCGTTTAATCTCGACAAGGAGTGCTGGCGTTGTGTGATATGCCGCGAGGTTTTCAACAATTTCCTGAAACTGTACGAGCACATGAACGTACATTATCAACATTATATCTGTTCGACATGCGGCAAGGGTTACATGACTGCGCCGCGTCTGAGGAAACACTCCGAGGTTCACATAGCCGGATCTTTCCCTTGTGATAAATGCGGAAAGGCGTTTACAATGCGAGCGGCGCGGGATCACCATAAAGCGCATGCGCACGCAAAGGGCCCCCGATACGAGTGCCCGCATTGCAACATCCGTTTTAATGGCTACTACGACAGGATGAATCATTTGAACGAAGCGCATAGGGAGAAAGAAGTGTCTTACCGTTGTAGTGTCTGCGAGCTATCTTTCAAAACGAGCGGCAAGCGTGCGATGCACGTTAGAACTGCCCACCTGCCGCAGCCTCGTAACTTTGGCTGCCCTTACTGTGACTGGTTGTTTAGAACCAGCTATGAGCTCAAACGCCACATGGTAAAGCACACTGGGGAGAGGAACTTCGCGTGCACGATCTGTGGGAAAGCGTACCCGAGGAATCGGGCGTTGAGGACGCACTTAAAGAGCCACGAGGACCTGACCTGCAAGTGGTGTGGCACGCTCTTCAAGCAACGTGCTCTGTTGATGTCGCACGCCCGAATCAATCACCCGGATCTGAACGATTTGATTGCCACATCGGATAAGATTTCGAGCTAA
- Protein Sequence
- MYDRTALGCLTCFFVLGIPVQRERESNVDGVQGINKVQTKKVWKKKRTLKKATVPRTAMITNAGNILKCWTVCPFKWRQNRFKCAYCNEGFSLPCELREHFRACSELTDDLFRRLKKTPLIKVDVTGAVCRFCSCPFPGVTEMHQHAVKHGFEFDASVNNGIIPFALDHELWRCAMCDQIFSVFFELDKHMNVHYEPFICDTCGKSYMTAMRLRRHFDCHTTGTFPCDLCDETFTLRTKRYQHKARVHSKLPRYVCQHCNVRFHRYDDKLKHLRLEHKEIVPIKCVHCHLTFENTNKRRTHLYSVHMHTKFKCTYCEASFGTRTRLRNHVVKHTGERRFACNICEKKYTRSASLWNHLRSHDYCTCKFCDVMFNRRSQLALHLIKEKRRYVRSARAEARVVTKRNAKTLLECWSLCPFRWQRNHFKCAYCEESFIQCSDLRRHVAECSAKHSVSDIYSKFKEMSLINVDVTNALCRLCRCPYSSIVQMRQHAIQHGFTFDTTQPDGVLPFNLDKECWRCVICREVFNNFLKLYEHMNVHYQHYICSTCGKGYMTAPRLRKHSEVHIAGSFPCDKCGKAFTMRAARDHHKAHAHAKGPRYECPHCNIRFNGYYDRMNHLNEAHREKEVSYRCSVCELSFKTSGKRAMHVRTAHLPQPRNFGCPYCDWLFRTSYELKRHMVKHTGERNFACTICGKAYPRNRALRTHLKSHEDLTCKWCGTLFKQRALLMSHARINHPDLNDLIATSDKISS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -