Mpay019232.1
Basic Information
- Insect
- Meandrusa payeni
- Gene Symbol
- -
- Assembly
- GCA_029286785.1
- Location
- JAGSMX010000036.1:1168670-1172960[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.16 13 6.9 1.6 1 23 118 141 118 141 0.94 2 18 6.1 4.9e+02 1.9 0.6 3 23 167 188 166 188 0.89 3 18 0.0022 0.18 12.8 0.2 1 23 212 234 212 234 0.98 4 18 0.0003 0.024 15.5 0.2 1 23 238 260 238 260 0.98 5 18 0.00018 0.015 16.2 2.3 1 23 265 288 265 288 0.96 6 18 0.0085 0.69 10.9 0.8 2 23 295 317 295 317 0.93 7 18 0.11 9.1 7.4 7.4 1 23 324 347 324 347 0.96 8 18 0.00034 0.028 15.3 5.4 1 23 353 375 353 375 0.97 9 18 0.00037 0.03 15.2 0.3 1 23 520 543 520 543 0.94 10 18 0.017 1.4 9.9 0.6 2 23 569 590 568 590 0.96 11 18 7e-06 0.00056 20.6 1.6 1 23 612 634 612 634 0.98 12 18 0.0033 0.26 12.2 1.0 1 23 638 660 638 660 0.98 13 18 0.0001 0.0082 17.0 0.5 1 23 665 688 665 688 0.96 14 18 0.00052 0.042 14.7 0.9 2 23 695 717 695 717 0.97 15 18 0.00074 0.06 14.3 1.7 1 23 723 746 723 746 0.98 16 18 0.052 4.2 8.5 4.6 1 23 752 774 752 774 0.96 17 18 1.7e-06 0.00014 22.6 0.4 1 23 780 802 780 802 0.98 18 18 4.5e-06 0.00036 21.2 0.2 2 23 808 830 807 830 0.96
Sequence Information
- Coding Sequence
- ATGGACAATATGGATATACAAGCGCCGGCACAAAGGATCGTGCCGTTATTTCAAGTGGATTATGACCGCAGCCTCTGTAGACCGCTGGGTACAGTGACAAACTTTAAACTCCTGGCCATGACCAAGATGGCCGGCAGGTTTGCTAACCTGTCGCCAGTTCCAGACATTTCATCTCGTAGCCCATCGCCTATATTAATGGGCACTAGAACGCCATCTCCTGATATTGAGATAGGTGATGCAATAAGCCAACTACCCACACGAGTGCCGAGAAAACAGGCCGACATCCGACAAAATGCACTGACACTGTTCGAATTTTCAACCGTTTACCCATTCATCTACGGGAACAATAAATTCAAATGTTTCATTTGTTCGCAACCGTTTCTAGAAACCGCCTTGCTTAGAAGGCACATGCACGATACACATACCTTCGCGCCCTTAAAGCGTCTGGTGAACAATCGCCGGGAGAACGTTATCAAAGTGGACGTCAGCGAAATGGCCTGTAGACTGTGCCCAGTTAAACCGAAAGATCTGCATCAACTCAAGCTTCATTTAAAAGAGGACCATGAAAAGCTCATAGAACCCGAACTTAAGGATAATATAATTCCATTTATGCTGGAAGGTGACGACGAAGGCTACAAATGCGTGATGTGCGATGTTAAGTTCATCAAGGTGCGAACACTTGTCATACATATGAGCGTCCACTTTAATAACTACAGTTGCGAAATCTGCGGATCCGGATTCATGACCCTGCGTCTACTGAAGAAGCACCTGGAGGTGCACGAGAGCGGCAGCTTCCACTGTGATCGGTGCAGCAAGGTGTTCAACACATCATACAAGCTATCGCTTCACATCAGAGGGGTCCATCTTAAGCAGTATCCCCGTCGATGTCCAATGTGCCCGGAGAGATTCAACTCGAACTACAGACGGACTAAACATTTGCAGGACGTCCACAATCAGTCGACCCGCGTACATAAATGCAAAACGTGCGGCCGTGGATTCAATCTAAAGTATCACCTAGTCTGTCACACGCGTTCGGTCCATCTCCAGGAGAGGAACCACCAATGCAAGGTCTGCTTGCAGAGGTTCTGTAATAAAGAAACACTGAAGAGACATATGGTTATACATACGGGCGAGAAGAATTACAAATGGTTCATCCATGTAACAAAATCTTCCATAACACTGAAAGACGATGACGGCACTGATATTAAATTATCAGTACTTAAGACACCCATAAGCATTGACAATCTTATTTGTGAAAATGAAGATATGGACAAGGCATCTGTTGCAAAGAAGTTTAATGAAGTACCTCTGACTATTAGGTCTGGATCTCCTGACGATAAACCCCAGTTGACGTTTTTAAAGGAGCCAATTTCTTTAGATAAGATTGGAAATGGGGCGATGTTGTCAATCCCAAAACCAATGTCTAACATAATCGTATCGAATTATCCAAGATCCTCACGGCGAAATGTCCCTCAAGAACATCAGATATGGGAACAAAATGCAATGACAATATTTGAATTTTCATACGTGTATCCATTCGTACATGCGAGCAATAATTTCAAATGCTACATTTGTTCTAAGGCGTTCGTAGACGCTAACCTTTTAAGAGATCATTCTATAAAGGACCACAGCATCGAGGAGTTAAGGCAGGAGATAAACAAGAGGAATCGGGATAAAATTTTGAAAGTAGATGTAATACAGCTTCAATGCAGAATTTGTCACGCCACACTTGTCAGCTTAAATGACTTGAAGATTCATCTTAAAGATCACGGGAAAGATATAGACCCATCTTTTCAAGATAACATTATACCTTTTAAATTGGGCAGCGACACTTTTGAGTGTCAAATCTGCGGGGAGAGTTTCCATAGATTACGACTTCTCATTACCCACATGAACAAACACTTCAACAATTACAGCTGCGAAATATGTGGCAGTGTGTTTGCTTGTATAAAATTACTGCGGAGGCATTTACAGACGCACACAAGTGGCAGTTACCCATGTGAAAGATGCAATAAAGTTTTTAGTACTTCCTCAAAAAGAATAACACACGTCAGAGGGGTCCATCTGAAGCAATGCATGAGGACATGCCCCTTATGCCCCGAGAGATTTAACTCTAATTATCAGCGAAGCAAACATTTAAGAATCTTCCACAACCAGACCAACAGATATAGATGCGAGACCTGCGGTAGACAATACGACTTGAAGTACCAATTATTCCTTCACAAGAGATCCGTTCACATGCAGGAACGCAATCATGAGTGTGGCATTTGTTACTCTCGTTTCTTTTCCAAATACTGTCTCTCTAGACACATGGTCATACATACCGGTGATAAAAATTTCAAGTGTGATGTCTGCGGGAAAGCATACGCGCGGAGGAATAATTTACGAGAACATGCGAAATCACATGAAGTCGTACAGACCTCATGCTCTGTATGCGGTCAAATATTTAACGATAATGCAGCCTTGATTCGTCATATGAATACTTTTCATGGTGTAATGTGA
- Protein Sequence
- MDNMDIQAPAQRIVPLFQVDYDRSLCRPLGTVTNFKLLAMTKMAGRFANLSPVPDISSRSPSPILMGTRTPSPDIEIGDAISQLPTRVPRKQADIRQNALTLFEFSTVYPFIYGNNKFKCFICSQPFLETALLRRHMHDTHTFAPLKRLVNNRRENVIKVDVSEMACRLCPVKPKDLHQLKLHLKEDHEKLIEPELKDNIIPFMLEGDDEGYKCVMCDVKFIKVRTLVIHMSVHFNNYSCEICGSGFMTLRLLKKHLEVHESGSFHCDRCSKVFNTSYKLSLHIRGVHLKQYPRRCPMCPERFNSNYRRTKHLQDVHNQSTRVHKCKTCGRGFNLKYHLVCHTRSVHLQERNHQCKVCLQRFCNKETLKRHMVIHTGEKNYKWFIHVTKSSITLKDDDGTDIKLSVLKTPISIDNLICENEDMDKASVAKKFNEVPLTIRSGSPDDKPQLTFLKEPISLDKIGNGAMLSIPKPMSNIIVSNYPRSSRRNVPQEHQIWEQNAMTIFEFSYVYPFVHASNNFKCYICSKAFVDANLLRDHSIKDHSIEELRQEINKRNRDKILKVDVIQLQCRICHATLVSLNDLKIHLKDHGKDIDPSFQDNIIPFKLGSDTFECQICGESFHRLRLLITHMNKHFNNYSCEICGSVFACIKLLRRHLQTHTSGSYPCERCNKVFSTSSKRITHVRGVHLKQCMRTCPLCPERFNSNYQRSKHLRIFHNQTNRYRCETCGRQYDLKYQLFLHKRSVHMQERNHECGICYSRFFSKYCLSRHMVIHTGDKNFKCDVCGKAYARRNNLREHAKSHEVVQTSCSVCGQIFNDNAALIRHMNTFHGVM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -