Mpay019196.1
Basic Information
- Insect
- Meandrusa payeni
- Gene Symbol
- -
- Assembly
- GCA_029286785.1
- Location
- JAGSMX010000036.1:869450-875888[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.0041 0.33 11.9 0.1 1 23 33 56 33 56 0.96 2 24 0.71 57 4.9 0.1 2 23 82 104 81 104 0.95 3 24 0.087 7 7.8 1.5 1 23 127 149 127 149 0.98 4 24 0.4 32 5.7 0.8 1 10 153 162 153 175 0.85 5 24 0.33 27 5.9 2.5 2 23 204 226 203 226 0.96 6 24 0.0062 0.5 11.4 1.4 1 23 233 256 233 256 0.96 7 24 0.0086 0.7 10.9 3.6 1 23 262 284 262 284 0.97 8 24 2e-07 1.7e-05 25.5 2.3 1 23 290 312 290 312 0.99 9 24 3.4e-06 0.00028 21.6 0.2 1 23 318 340 318 340 0.99 10 24 0.00051 0.041 14.8 0.1 2 23 436 458 435 458 0.96 11 24 0.0095 0.77 10.8 0.1 2 23 479 501 478 501 0.95 12 24 0.0029 0.23 12.4 1.8 2 23 507 529 506 529 0.94 13 24 0.0042 0.34 11.9 1.0 1 23 534 557 534 557 0.96 14 24 0.72 58 4.9 0.2 2 23 560 582 559 582 0.92 15 24 0.025 2 9.4 1.8 2 22 589 609 588 609 0.94 16 24 0.011 0.9 10.6 1.1 1 23 669 692 669 692 0.95 17 24 0.032 2.6 9.1 0.1 3 23 721 742 719 742 0.96 18 24 0.11 9 7.4 0.1 2 23 765 788 764 788 0.93 19 24 0.00051 0.042 14.8 0.6 3 20 795 812 793 816 0.90 20 24 0.015 1.2 10.2 0.3 1 23 821 844 821 844 0.97 21 24 0.00045 0.036 15.0 0.3 2 23 850 872 849 872 0.92 22 24 0.00011 0.0089 16.9 5.0 1 23 876 899 876 899 0.97 23 24 0.0018 0.14 13.1 0.6 2 23 906 927 905 927 0.96 24 24 0.021 1.7 9.7 0.7 1 23 933 955 933 955 0.96
Sequence Information
- Coding Sequence
- ATGACGGCGACCGATCGTTTCCTCGCCATGAAAAACTCCGTTGTAATTATACTAGAATCAACCTctgtgatcccatttaaatgGCTCAAGCAGAGCTACGCCTGCTTCTACTGTGAACAGGCTTTCGAAGACACAGGGCTACTTAAGGATCATGCTAAGTCTGATCATATCGATGCCAAGATTAAACCCGCTGTGTTTAATCTGAGAAGGGATGAAATGGTGAAAATTGACGTTTCAACGACAACTTGCGCGCTATGCAATATGGATTTAGGAGATCTAAACAGTCTGATAAACCACCTTAAAATAACCCACAAAAAGCCTCTCGTCGAGCATACCTCCATGTACGGCGTAATACCCTACAAACTCCATTCGGACAAGTTCCAATGTGCGCTATGTCGAGcggattttcaatatttcaacaAACTAAACCAGCACATGAACCAGCATTACGAGAATTACATTTGCGAGTTGTGTGGCAAATCGTTCCTCGGCGAGGAACGTCTCAGATGCCACGCCAAGAGTCACGAATTCGATCTCTGTATATCCGATACCTCGACCCAGCAAATCAACAATGAACAACGCAAAACTCACAATTATAAGAAAACAATCAAATGCCTCTATTGTTCGGAAATGTTCGGAAACTACACGTCTAGGAAGACGCACCACAGCACGGTCCATAACGCGGATGTGTCCAGATTCAACTGTCCAATTTGTAAGAAGCCTTGCTATATAAAGAACAGATTGCAGATCCACATGAAGGAGGTCCACCTCAGGGAGAGGAATTTCGCATGCACCATGTGCGATCAGAGATTCTACTGCAGGAGTTACTTGGACAAGCACATGATCACACACGTGGGCGAGAGGATATACCAGTGCGAGATCTGCAAGAAGACTTACACCAGAAAGCAGACCCTTAGGGAGCACATGAGGATCCATAACAACGATAGGAGATATGTGTGTACTGTGTGCAGTGAGGCGTTTGTACAGAACAATAGTCTTAAGCTACACATGAGAGTTCATGATCCCGAATTCACGGTTGGTGTTAAACCGCGCAAATACAACGGCTGCGAAGCATCGTCTCCGCGCAGACGGAGAAATctgcaaataatatttaacaataccACGGTGATACCGTTCAAATGGCGTGGCAAATACATATGCTTCTATTGCAGCAAGGATATGCAAGAATACGACAAGCTGAGATGCCATACGAGGTCCCACGGGGATTGTTCCATCGGTGACCACTCCTTAATGGTCCTAAAGGGCGGTCAGAATATGGAAATCAAGATTGACATATCAGACGTGACCTGTCTGATCTGTAACAAATCTTTCCCGACCCTTGATGAAGTGTTGAACCATTTAAATGTTGAACACGAGCTTGGATATGACAGAAACGTGGATATGGCCATGGAGGAATACAGACTAGCTGATCTGAAATGCCTTTTGTGTGATCTGAAGTTCGCGTACTTTGGCAATCTGGTGTCACACGTCAATATCAGTCATCCAAAGAATTGCTTGATATGCGACAGTTGCAATCAAAAgttcaacaaaaaaagagaCCTCTTCTCCCACATCAAAAATTATCACAGAGAAGGCGGTTACAAGTGCGATATTTGTCCGGAGAACTTCACATCAATGAACATCTTACgaaaacacagaaacaacaaacACTGGACTAGCTGCAGCATTTGCCAGTTGAAATTGCCTTCGGCTGCGTTGAAGAGGAAGCATATGGACCTGGAGCATCCAGACGATGGCTCCCTCCAGTGTGCCAATTGTTCGAAAGAGTTTCATACAAAACAAGGCTTGAGAATGCACAAAAGGAAATGTATGGGAGTGGAGGAATTTTTCGTCGAAATCAAAAAAGAGGAACACGACTGTATGGATTTAGACGAAAGCTACGAAGACATAGTGAAAAGACCGAGTGTTAAACAAATCAGAGAGAACATACTCATTGTCATCAACATGTCTACTGCTATACCTTTTAATTTCTACAAGAATAAGTTCAACTGCTTCTATTGCTCCAAGGATTTCCAGGACTCTGAATCAATGAGGGATCACACTATATCTGAACATCCAGTTTGCGATGTAAAGCAAAAATGTATCAGGAAATGTAGGGAATCGGTTGCGTGCGTTAAAATAGATATATCAACACTAGCCTGTAAGATATGCTTCCAATCCATAAGCGAATTAGACAATCTAATAGATCATCTAATAACTAACCACAATGCTAATTACGATAGGTCAATAACCACATGTTTACAACCTTTCAAACTGAATAAAGATCATGTACCCTGTCCCTTGTGTCCAAATGAGGTTTTCAGATTTTTCGGTACACTACTCAAACATATGAATGAGAAGCATACAGATAATAACATCATTTGCGTGTATTGCGGTCAATCTTTTAGGCGAGACCAGAACTTAAGAGTGCACATCTGGCGTCATCACAAAGTCGGCAAGTTCAAATGTACCATTTGCGGGGCGGAATGTTATATACCTTCCCgtctatacatacatatggcGAAAGCTCACGGTGTTAAAGCATCCAAATGTCCAAAGTGCCCTGAAACGTTTGCAACGCAATATCTCAGGCAGAAGCATTTGATAGACGCCCACGAATCCGGACATAAATGTTCTTACTGCGACAAGCTCTTTACTCGGAATTCCTTTATGAGAGATCACATCAGACGGACCCATTTGAAGGAGAAAAACGTGGAATGCATGATCTGCACTATGAAGTTCTTCAACAACATTCTTCTACGTAGGCATATGGTGAAGCATAGCGGGGAAAAGAATTTCAATTGCGACGTTTGCGGCGAACGTTTCTTTTGGGGGAAGAGTCTACGTAATCATATGACTCGACACGCTAAACTCGTGCCTCCTATGCAAACCTAA
- Protein Sequence
- MTATDRFLAMKNSVVIILESTSVIPFKWLKQSYACFYCEQAFEDTGLLKDHAKSDHIDAKIKPAVFNLRRDEMVKIDVSTTTCALCNMDLGDLNSLINHLKITHKKPLVEHTSMYGVIPYKLHSDKFQCALCRADFQYFNKLNQHMNQHYENYICELCGKSFLGEERLRCHAKSHEFDLCISDTSTQQINNEQRKTHNYKKTIKCLYCSEMFGNYTSRKTHHSTVHNADVSRFNCPICKKPCYIKNRLQIHMKEVHLRERNFACTMCDQRFYCRSYLDKHMITHVGERIYQCEICKKTYTRKQTLREHMRIHNNDRRYVCTVCSEAFVQNNSLKLHMRVHDPEFTVGVKPRKYNGCEASSPRRRRNLQIIFNNTTVIPFKWRGKYICFYCSKDMQEYDKLRCHTRSHGDCSIGDHSLMVLKGGQNMEIKIDISDVTCLICNKSFPTLDEVLNHLNVEHELGYDRNVDMAMEEYRLADLKCLLCDLKFAYFGNLVSHVNISHPKNCLICDSCNQKFNKKRDLFSHIKNYHREGGYKCDICPENFTSMNILRKHRNNKHWTSCSICQLKLPSAALKRKHMDLEHPDDGSLQCANCSKEFHTKQGLRMHKRKCMGVEEFFVEIKKEEHDCMDLDESYEDIVKRPSVKQIRENILIVINMSTAIPFNFYKNKFNCFYCSKDFQDSESMRDHTISEHPVCDVKQKCIRKCRESVACVKIDISTLACKICFQSISELDNLIDHLITNHNANYDRSITTCLQPFKLNKDHVPCPLCPNEVFRFFGTLLKHMNEKHTDNNIICVYCGQSFRRDQNLRVHIWRHHKVGKFKCTICGAECYIPSRLYIHMAKAHGVKASKCPKCPETFATQYLRQKHLIDAHESGHKCSYCDKLFTRNSFMRDHIRRTHLKEKNVECMICTMKFFNNILLRRHMVKHSGEKNFNCDVCGERFFWGKSLRNHMTRHAKLVPPMQT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -