Basic Information

Gene Symbol
CSRNP3_1
Assembly
GCA_029286785.1
Location
JAGSMX010000012.1:4427465-4429633[+]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.46 1.1e+04 -3.5 1.5 88 109 55 77 28 100 0.45
2 2 7.4e-100 1.8e-95 319.4 6.6 3 218 203 410 201 410 0.92

Sequence Information

Coding Sequence
ATGGACAGCATCCCTAATCTACCTAATCAAGACATCAGTAAAGATCTCGCAGCGATGGAGGAAGGAAGCAGAGAAGAATATTTTCCCATTATAAAAGATGATAAGAGTGGTGAAAGTGATGCCAACAGTGAGGACATTCATTCCAATGATGAGCATTGTAATATCAATAGCAACTCTCAGTTTTATGAGAGCAgtgataataaaatagattatgCTGTAAAAATAGATGACAATGATACATTAAGTGATATAGATGATATTAAAACTGATACCGCCTCAGCTGACAGTGAAGATTCTGCTCTTGGTAGCTTGCCTCCAGACAGCGGGCCTAATGATGGAGAAGAAGAAGGACAAGATAGATCAGATGGTAGTGACTGTGGTCTCGGCTTAGAAGCAAATGACAATGCTGAACCGCCCAACTTTGACTTAGTACTGCCATGTGCTAGTGGTTTGAACAGTTCCAATCAGCCCAATTCTGATGTCGGAAAttgcgattttgatgataattcAAGTAGCTATAACTTTAGTAATGAGAAACCATACAAAAGTAGTCTCAAAAGAAAAATTGAGGATTGTAATAATGATGACCCACAAGCAAAAAGAGCAAAACTGAGCATACATTTTGATAATGTAACAGTTTTTTATTTCCCAAGAGCTCAAGGTTTCTCTTGTGTTCCATCACAAGGCGGTTCCACCTTAGGTATGGAGTGGGAACACACACATATTCAGAAATTTACATTATCTGAACATGCTTTAGAACAAAGAAGGTTGCATAGGCaaattttacaacaaataaaaaatgaacgtcATAATCTGCAAGGAGTCCCTCTGTCCTCAAGTGAAGAGAGTGACACTGAAGAAGAGACAAGTGACATTTCTGAATCTGAATTGGATCTTGATAGTTACTATTTCTTGCAACCTGTCCCTACTCGTCAAAGAAGAGCACTCCTACGTGCTGCTGGTGTTAGAAAAATTGAAGGCTTTGAGAAAGATGACTGCAGAGACATAAGAAGTTCTCGTGAGTTCTGTGGCTGTGCCTGTAAAGGAACATGCAACCCAGAAAACTGCTCTTGTAGTTTGGCTGGTATTAAATGTCAAGTTGACAGACTGAATTTCCCCTGTGGATGCACAAGAGAGGGCTGCTGTAACCCCACTGGCAGAATTGAATTCAACCCCATTAGAGTAAGAACTCATTTTATCAATACACTTATGAGATTAGGCCTTGAGAAGAAAAATGAGGATAATCAAGATGCAGTAAAAAGACAATGGGCAGAAGCATACAACACAAACAATTCTAGTTGTCCTAACACATCTTTTGAAAGGGAACGTTGTCTAAGTCATGAAGATGGATTACTGCGTGACGTAAACCTAACTCCGAGAGTAGAAGTGGAGTCATGTGTCAATTCTGGTAGTTTTAATAATGTTCATTGTGATATCAACACAAATATAAAGGAAGATGGTACATATGGTTATAGTAATACTACAACAGGCCATGTCTGCATGAATGATAATCTGGTGGGGCAATTTGAAGAGAAAAACAACCATCACCATACACCTTACACATCAAGCATGATCCAAGGTAAAGGTCCTCCTTACTCAACAGCAAATACAATGGGATTTAATACAATGTCAAACATACAAAATTTTCCATGTGACCTCAACTATGTATACGAACAGCGTACTGAAGGTCACCATTTTAAAAGCCTGTCCAGTTTCTCTGCATCTAGTTTCGAAGAGTTTGCTCATAGCTCTCAAATGTCCATGTACAATAATTACGGCCATCTGTACATGCCTGATTACATGCACAAACTAAACACAAACCCAACTAGCCATAATTCTGTACCATATCATGTGATGGCGCAGAATCATtatgaaatgtataaaaataacacaGAATGTGTGGATGCGGATAATAAAAATGGGTCTCACTATACAACATTAATGACACCATATCAAAATAGCAATAAATTGCAAACAGTAGAGAATGTTGAAAATTGGTTTAGTCATAACACATTAATAAACCTAGACCAGTGTGATCACACTACACAGGATAGTGTCAATGCGCAGCCGACTCCAGCGGAAACTGCACCAGAGAGTGAAGCAACGGAAGCTACCGAAAACTTTGGtgaactaattaaaaaaaccatGGTAGAGTCTGTTATTGtgtag
Protein Sequence
MDSIPNLPNQDISKDLAAMEEGSREEYFPIIKDDKSGESDANSEDIHSNDEHCNINSNSQFYESSDNKIDYAVKIDDNDTLSDIDDIKTDTASADSEDSALGSLPPDSGPNDGEEEGQDRSDGSDCGLGLEANDNAEPPNFDLVLPCASGLNSSNQPNSDVGNCDFDDNSSSYNFSNEKPYKSSLKRKIEDCNNDDPQAKRAKLSIHFDNVTVFYFPRAQGFSCVPSQGGSTLGMEWEHTHIQKFTLSEHALEQRRLHRQILQQIKNERHNLQGVPLSSSEESDTEEETSDISESELDLDSYYFLQPVPTRQRRALLRAAGVRKIEGFEKDDCRDIRSSREFCGCACKGTCNPENCSCSLAGIKCQVDRLNFPCGCTREGCCNPTGRIEFNPIRVRTHFINTLMRLGLEKKNEDNQDAVKRQWAEAYNTNNSSCPNTSFERERCLSHEDGLLRDVNLTPRVEVESCVNSGSFNNVHCDINTNIKEDGTYGYSNTTTGHVCMNDNLVGQFEEKNNHHHTPYTSSMIQGKGPPYSTANTMGFNTMSNIQNFPCDLNYVYEQRTEGHHFKSLSSFSASSFEEFAHSSQMSMYNNYGHLYMPDYMHKLNTNPTSHNSVPYHVMAQNHYEMYKNNTECVDADNKNGSHYTTLMTPYQNSNKLQTVENVENWFSHNTLINLDQCDHTTQDSVNAQPTPAETAPESEATEATENFGELIKKTMVESVIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01143103;
90% Identity
-
80% Identity
-