Basic Information

Gene Symbol
dnajc2
Assembly
GCA_029286785.1
Location
JAGSMX010000008.1:401516-404059[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.1 6e+03 -2.1 0.4 6 16 231 241 230 242 0.85
2 3 1.1e-06 0.0013 19.2 0.0 3 31 367 399 365 403 0.86
3 3 1.2e-13 1.4e-10 41.5 0.2 2 44 489 535 488 537 0.91

Sequence Information

Coding Sequence
ATGACCGACGGAGGTATTAATTGTTATAGCAGCGAGATAGCCATACCATGGCCGTTTTTGCAAAGAAAAGTAGAATGCGCAGGGCCTGCATTTCTAagatattataacataaaatgtcACGGTGCAGACACACAGCTGTTAACTTCAACATCTAAGGAGAATAGCGAAGAAGTGATCTTTGATGACGATGTGGATTATTTGAGGAGTTTGGACCCTAAAGAATGGAAGAGACAAGACCACTACGCTGTATTGGGTATGAAAGACTTGCGGTATAAAGCCACCGAAGATGACATAAAGCGAGCCTATCGCCAGAAAGTATTAAAACATCACCCCGATAAGCGAAAGGCACAAGACAAGAGGAATGTGCCTTTATTGGGTGACGAAAACAGCTCCCGTGAGTATGTTGAGAGATTTTATGCCTTTTGGTATGAGTTTGAGTCGTGGCGTGAGTTTTCATACCTAGACGAGGAGGAGAAGGAAAGGGGAGCAGACAGGGAAGAGCGTCGTTGGATagagaaacaaaataaagtggCAAGGGCAAAGTTAAAGAAAGAGGAAATGGCCAGGATACGAAATCTAGTTGACTTAGCTTATGCAAACGATCCACGAATCCAGCGCTTCAAACAGGAGGATAAAGACAAGAAGCTGGCTGCTAAACGTGCCCGAcagGATGCTGTTCAAGCCAAAAAAGCTGAAGAGGAGCGTATATTGAAAGAGGCCTTACTCGCTAAACAGAAAGCTGACGAAGCCGAGAAAGCACGTCTTGATGCTGCAAGGGCTGAAAGGGAACAACTGAAAAAGAACTTGCGTAAAGAGCGAAAATCCTTTAGAGATCTATGCAAAGCCAACAACTACTATGCTCAAAATGATAATGAAACGGTTGCGCACTTAGGGGCAGTCGAAAAGATCTGTGAAATGCTCAAAGTGGTAGAATTACAAGATTTTATGAAAGAGTTAGAATCAAATGGCAGGGAGGCTttcattaaaactttaaaagaaaCAGAAGAGAAATTAGAAGCTGAACGTAGAGCATTATTCGAAACAAAAAAAGCTGATGACCAGAAATCCAAAAAGAACGCAATTTTAAAAGCATCTGTTGAATGGACACCGGAATTGACTCAACTCCTCATTAAAGCTGTAAATCTATTCCCAGCGGGCACTAATCAAAGATGGGAAGTTGTTGCCAACTTCCTTAATCAGCATGGAACATTTGTTGATGAAAGACGTTTCAACGCTAAGGAGGTTCTTAACAAAGCTAAGGATCTACAAAGTTCTGACTTCTCGAAGAGTAGCCTCAAAAAAGCCGCCAACGAAGAGGCTTTTGATCAGTTTGAGAAGGACAAAAAGAAAGGCATAAATAATATTGACGACAGCAGTATATCGAAAAATGATACGAAATTAGTCAATGGAATAGGGAAGCCTAAAATGAATGGTGATATTGGCAAGGACACAGGAAAGGAGGAAAGAGCCTGGACAAAAACTGAGCAGGAGTTGTTGGAGCAAGCTATCAAGACATTCCCTGTGAGCACACCGGAGAGATGGGAGAAAATTGCAGACTGTATCCCCAATCGCACCAAAAAAGACTGCATGAAGAGATACAAGGAGTTAGTAGAGTTAGTTAAAGCGAAGAAACAAGCGGCAAATTTTGCTTAG
Protein Sequence
MTDGGINCYSSEIAIPWPFLQRKVECAGPAFLRYYNIKCHGADTQLLTSTSKENSEEVIFDDDVDYLRSLDPKEWKRQDHYAVLGMKDLRYKATEDDIKRAYRQKVLKHHPDKRKAQDKRNVPLLGDENSSREYVERFYAFWYEFESWREFSYLDEEEKERGADREERRWIEKQNKVARAKLKKEEMARIRNLVDLAYANDPRIQRFKQEDKDKKLAAKRARQDAVQAKKAEEERILKEALLAKQKADEAEKARLDAARAEREQLKKNLRKERKSFRDLCKANNYYAQNDNETVAHLGAVEKICEMLKVVELQDFMKELESNGREAFIKTLKETEEKLEAERRALFETKKADDQKSKKNAILKASVEWTPELTQLLIKAVNLFPAGTNQRWEVVANFLNQHGTFVDERRFNAKEVLNKAKDLQSSDFSKSSLKKAANEEAFDQFEKDKKKGINNIDDSSISKNDTKLVNGIGKPKMNGDIGKDTGKEERAWTKTEQELLEQAIKTFPVSTPERWEKIADCIPNRTKKDCMKRYKELVELVKAKKQAANFA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-