Basic Information

Gene Symbol
Kdm5
Assembly
GCA_029286785.1
Location
JAGSMX010000047.1:309586-312027[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.9e-23 3.6e-20 72.6 0.1 4 89 95 176 93 176 0.93

Sequence Information

Coding Sequence
ATGGatagtaaaaatattcaaaaaaatgcCATGCAAAAAAGTGCAGAGTTTACTTTCACTCCACCACCCGAAGCGCCCGTATTTGAGCCTACCCTAGAAGATTTTGCGGATCCCTTAGGATATATCGCTAGAATTCGTCCTGTTGCTGAAATAACAGGCATTTGCAAAATAAAGCCTCCTGCGCGTTGGCAGCCACCTTTTTCATTGGAcgtagacaaattaaaatttgtaccaCGAATACAAAAAGTAAATGAATTGGAAGCCATTACCcgtttaaaattgatatttctcgagaaaattttgaaattttgggaATTACAGGGTTCTCCTTTAAAAATCCCTatgattgaaaataaaacattagatTTATATTGCTTGAAATTTTGGGTAGACGAAGAAGGTGGTTTTGAAAATTGTAATACTCCGAAAAAATGGCGTAAGATTGCTAACGCAATGGGCTACAGTCAGAATGCGAATACGATGAACTTTCTTAGAAGTAATTATGAGAAAATTTTGCTTCCTTATGAAATTTTTGAGAAAAGTAAAGCTGATATATTGAAGACTGTGAAAAAGACTGAAACCAAATCTGAAATAAAGGGTGATGGCGACATTGCGAAACAGTCGTTCAAGGAAATATCTGTACAGTCTATCACAAAAGTAAAAGAAGAATATAGTGACATGATGCCCCatacaagtattaaaaaaactaaaacaggATCAGATATCAAACTTGATGGAGATGCCAAGGATGTGGTTGAATCTGGGGAAGTAAAATGTACTAACAACAGAGAACTGAGAAGACTGACATGCTATGGGCCTGGTCCTAAAATGCCTGGTTTGAATGATGAAGAATTCGATATAACTAAATCCAGGAAAAGACCAAGATATGATTTAGATCCTCTGGCAATTTATGTTTGTGCAATTTGTCAAAAGGATCACTCTGATAACCTTTTGTTGATTTGTAACGGTTGCTCTGATACTTATCACACATTTTGCTTAAAACCTCCTTTAAGTTCTGTTCCTGATGGGGACTGGCGTTGCCCATGTTGCATAGCTGAAGAGGTACACAAGCCAGCAGAAGCTTTTGGATTTGCACAAGCCGAAAGGGAATACACACTTCAACAGTTTGGAGAAATGGctgataaatttaaatctgATTACTTTGGTATGTCTGGTCATCTGGTCCCAACGACTGTTGCAGAAAAAGAGTTTTGGAGGATTATATCATCTGTGGAAGAAGATGTTACCGTAGAGTACGGTGCAGATTTGCATTCCATGGATCATGGGTCAGGTTTCCCAACAAAGTCTTCCTTGAATCTTTATCCTGGTGATCAAGAATATGTAGATTCAGGCTGGAATTTAAATAATCTACCCGTTTTAGATGGTTCAGTATTAAGATTTATTAATGCTGATATTTCTGGTATGACTGTACCATGGATGTATGTTGGCATGTGCTTTTCtgcattttgttggcataatgAAGACCATTGGAGTTATTCTATTAATTATCTACATTGGGGTGAAGCAAAAACTTGGTATGGTGTACCAGGAAGTGGAGCAGAATTGTTAGAAACTGCAATGAAAGCTGCAGCACCAGAGCTTTTCAAGTCTCAACCAGATTTACTTCACCAATTAGTTACAATAATGAATCCTAATATACTGATGGCTGCCGGGGTACCTATTTATCGAACTGATCAACAGGCAGGTGAATTTGTTGTCACATTTCCTCGAGCTTACCATGCAGGTTTCAATCAAGGTTATAATTTTGCAGAAGCAGTAAACTTTGCCCCACCAGATTGGCTAAAAGTTGGCAGAGAGTGTataattcattataaaaatcttaaaagatTTTGTGTCTTTTCGCACGATGAGCTTATTTGTAAAATGGCTTTAGAAGGCGACCGCTTAGACTTGGAAACGGCTTTAGAGACACAGAAAGAGTTAGTTTGGGCTACAGAAGAAGAAGGTAGGTTACGAGCACTGATTGCCAAAAAAGGTTTGAAAAGTGTCAGAAGAACAGCCTTTGAGTTGCTGGGTGACGATGAGAGACTATGTGAAGTATGTAAGACAACTTGCTTCCTGTCCTCAGTTCTATGTGCCGATTGTAAGCACATGGCTTGCCTGCAGCATGCCAACGACTTTTGCCAGTGTCCATTAAATAAAAAGACTCTTAACTATAGGTATGACATGGACGAGTTACATATCATGTTGCAGACCCTCGATTTTAGGGTAAACAGTTTTGATAAATGGATGACAGAAactaagaaaatattactaccaACGGCTCCTGACATTGGGAGGgttcaaaagttaaaaaatttacTAGATGAGGCGGAAGAGTTAAAAATACCAAAGTGTATATTGTTAACACAATTGAAGAACGAATATACCACAGCAACTGAGAATGTTGAACCGATCATCATTGAATTAGATGATGATTGA
Protein Sequence
MDSKNIQKNAMQKSAEFTFTPPPEAPVFEPTLEDFADPLGYIARIRPVAEITGICKIKPPARWQPPFSLDVDKLKFVPRIQKVNELEAITRLKLIFLEKILKFWELQGSPLKIPMIENKTLDLYCLKFWVDEEGGFENCNTPKKWRKIANAMGYSQNANTMNFLRSNYEKILLPYEIFEKSKADILKTVKKTETKSEIKGDGDIAKQSFKEISVQSITKVKEEYSDMMPHTSIKKTKTGSDIKLDGDAKDVVESGEVKCTNNRELRRLTCYGPGPKMPGLNDEEFDITKSRKRPRYDLDPLAIYVCAICQKDHSDNLLLICNGCSDTYHTFCLKPPLSSVPDGDWRCPCCIAEEVHKPAEAFGFAQAEREYTLQQFGEMADKFKSDYFGMSGHLVPTTVAEKEFWRIISSVEEDVTVEYGADLHSMDHGSGFPTKSSLNLYPGDQEYVDSGWNLNNLPVLDGSVLRFINADISGMTVPWMYVGMCFSAFCWHNEDHWSYSINYLHWGEAKTWYGVPGSGAELLETAMKAAAPELFKSQPDLLHQLVTIMNPNILMAAGVPIYRTDQQAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPPDWLKVGRECIIHYKNLKRFCVFSHDELICKMALEGDRLDLETALETQKELVWATEEEGRLRALIAKKGLKSVRRTAFELLGDDERLCEVCKTTCFLSSVLCADCKHMACLQHANDFCQCPLNKKTLNYRYDMDELHIMLQTLDFRVNSFDKWMTETKKILLPTAPDIGRVQKLKNLLDEAEELKIPKCILLTQLKNEYTTATENVEPIIIELDDD