Basic Information

Gene Symbol
ATFC
Assembly
GCA_029286785.1
Location
JAGSMX010000001.1:564809-566122[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.8 7.7e+03 -2.6 1.4 6 11 40 45 37 49 0.53
2 2 7.2e-10 6.3e-07 29.7 8.7 2 62 272 332 271 335 0.94

Sequence Information

Coding Sequence
ATGTCGGCGCCTGTGTCCACGAGGAAACGTTCCCGAGTGTCGCGATCGTGTACACATAGGCGATTGCTTGTATGGGAGACATCGACGCTCGCCACAGTCGATGTCGACATTTTGAGACGACGGCGACGGAAGCGTTATGTGTTGGCGCGGAGTATTCGGCCATCTGGTCGGCTCTACCCTCCATCGCCGCTTGAGACGAAGCCGAGTCGCGCCGAGCTTGCCAGCGATCTTCTGCAGCAGCTAGATAATAACTACAAACAGGAAAACATCTTCCCTAACTGGTTAGAAGAGAAGGTCGAGCTCCCCATCTTTGAAAATATCAATCAAGTAGCAGAACGTGTAGAGGTTCCGATTCAGATATCGCCCGTGCCTCCCGTGATCACGTACGATCACCCTCACGTGGTACCTCAGCCAACAGAAGAGCTTCTACGCGAATTTGAATCCGTTTACGGCGCTGTAGAGCTGACACATCTTACCCCGCCGCAGAGTCCGCCCGGCCCCGCTACACAATTGTTGCTAAGTTATGTGCAACAAGCTCAGTACGCTCCACTTGCTCCGTCACTACCTTTGCAAGCTCCGCAAGATCAGTGGGTCGTCGCGCACACACCTACCCTGCCTGCTGAATATGACTGCGACCTCCAAGCCGTGGAGGAGTTGGTGCGCCACCGCGCAGCTCAGTTAGCATCGCCGCAGGCTTCGGGTGGAAGCGATTGCACGTCCCCGCATTCCTCCCCACCATCTTCTCCGCGCTCATCTTCCACAGATGAGGAGTGGTCCGGTCCGTCTCGGCCCAAACCTTACTCAAGGAACGTAGACGACCGGCGTTCCAGGAAAAAGGAGCAAAACAAGAACGCCGCTACCCGCTATCGCCAGAAGAAGAAAGCGGAGGTGGAAGTACTGCTCAACGAGGAGCAAAGTCTAAGAAATCGCCACACGGAGTTGGGCGATAAGTGCTCCGATCTCCAACGAGAGATTCGCTACATAAAGGGGCTCATGCGCGATCTACTAAAGGCTAAAggcctaataaaataa
Protein Sequence
MSAPVSTRKRSRVSRSCTHRRLLVWETSTLATVDVDILRRRRRKRYVLARSIRPSGRLYPPSPLETKPSRAELASDLLQQLDNNYKQENIFPNWLEEKVELPIFENINQVAERVEVPIQISPVPPVITYDHPHVVPQPTEELLREFESVYGAVELTHLTPPQSPPGPATQLLLSYVQQAQYAPLAPSLPLQAPQDQWVVAHTPTLPAEYDCDLQAVEELVRHRAAQLASPQASGGSDCTSPHSSPPSSPRSSSTDEEWSGPSRPKPYSRNVDDRRSRKKEQNKNAATRYRQKKKAEVEVLLNEEQSLRNRHTELGDKCSDLQREIRYIKGLMRDLLKAKGLIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01141401;
90% Identity
iTF_00957711;
80% Identity
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