Basic Information

Gene Symbol
Xbp1
Assembly
GCA_029286785.1
Location
JAGSMX010000006.1:14736840-14738699[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.9e-18 2.6e-15 56.6 11.4 2 65 44 107 44 107 0.96
2 2 0.00039 0.34 11.4 1.2 32 55 88 111 88 115 0.91

Sequence Information

Coding Sequence
atgagCGCTCCAATTATCATAACTGTTCCCAACAACTACCTAGCGTTGGAGGAGATGGATACGCAGGTGATGGTCGACGTTTCATCGTCGCCGCCTTCGCGGAAGAGGAGGCTCGACCATCTGACATGGGAAGAGAAAATGCAGCGAAAgAAGTTAAAAAATCGTGTGGCTGCACAGACTTCCCGTGACAGGAAAAAAGCGAAAATGGACGAAATGGAAAGCCGCATCAAGCATTTTATGGATATGAATGAAAAGCTTCTTAATGAAGTAGAGAGTTTGAAGGCACTGAATGAGCGTCTGTTAAGTGAAAACACAAAGCTACGCAGTGAGGCGGCGGCTCGCACCGTCGCGGGAGCCCCGGGACCAGCAGAGTCTCAACCTCGGCAGAAGGACGGGCTCCCGCCGGCGATGCGGGCGGCACACTTATTGCTAGTGATGTGCCTCTTGCAGACATCCTCTCACAGTTTGAATCTGAAGAGTACCTCGACACCCTTAATCAACTTGCAAACTCCCTCCTCCAAGAGATTGATGCAAGTGCTGCAGGAGCGCTTGAAgatGTCACAATCAGGGAAGTTACAGAATGCATTGAAGGAGCTCAAGTGGTGGGGGCCACAGCAGAGCAACTGGAATCCAGTAAAAGTGAATGCATAG
Protein Sequence
MSAPIIITVPNNYLALEEMDTQVMVDVSSSPPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESRIKHFMDMNEKLLNEVESLKALNERLLSENTKLRSEAAARTVAGAPGPAESQPRQKDGLPPAMRAAHLLLVMCLLQTSSHSLNLKSTSTPLINLQTPSSKRLMQVLQERLKMSQSGKLQNALKELKWWGPQQSNWNPVKVNA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
iTF_01154760;
80% Identity
-