Mdes018541.1
Basic Information
- Insect
- Mayetiola destructor
- Gene Symbol
- nfxl1
- Assembly
- None
- Location
- GL501520.1:4682-8033[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 2 2.2e+04 -7.9 5.6 15 19 187 191 186 191 0.81 2 16 0.11 1.2e+03 -0.1 0.2 4 10 222 228 221 230 0.94 3 16 7.9e-07 0.0089 16.3 13.5 1 18 236 252 236 253 0.94 4 16 0.00028 3.2 8.2 9.9 1 18 289 307 289 308 0.94 5 16 1 1.1e+04 -3.2 0.6 6 10 333 337 332 337 0.88 6 16 6.4e-08 0.00071 19.8 13.9 1 19 343 361 343 361 0.99 7 16 1 1.2e+04 -3.2 0.8 1 8 386 392 386 393 0.67 8 16 7.6e-06 0.085 13.2 10.6 1 18 396 413 396 414 0.91 9 16 2e-07 0.0022 18.3 16.6 1 18 448 465 448 466 0.98 10 16 1.9e-09 2.1e-05 24.7 11.0 1 18 475 492 475 493 0.98 11 16 1.6 1.8e+04 -3.8 13.4 9 18 539 548 531 549 0.84 12 16 0.13 1.4e+03 -0.3 6.4 3 12 562 571 561 571 0.88 13 16 0.00031 3.4 8.1 3.4 1 11 642 652 642 653 0.96 14 16 0.047 5.3e+02 1.1 14.3 4 18 683 697 681 698 0.92 15 16 1.9e-07 0.0022 18.3 9.8 1 16 749 763 749 769 0.93 16 16 1.2 1.4e+04 -3.4 0.8 5 10 797 802 797 802 0.86
Sequence Information
- Coding Sequence
- ATGTCATCAATTGACAAAAGCAGTAACTCACAACGTAGTACCAATAATAATTCGTCATCGGATAATAATCCATGGCATCTTCCAAAAGAACAAAAACCAAAGATCGGAAGTGAAAAAAGTAAAAAGAATGCCAAAAACTCCGTTAAAAAATTTAATGAGGTTCAATTGGAGCATATTAAAGCAGCGAAAAAACATATTCAAAACTATGAATCGAGTTCAGAAGAAGAGGATGATGATCTCGAATATGATAAACTCATTCAATCTGTGTTCAAAGAATATAACGGTGATCAGATTCAATTAAAAAAAACACAAGAATTTCTTGAAAATGTTTTCCAATCGGGAACAGCCACATGTCTCATTTGCATTGCAACCGTCAAGCGAAGTGATTACATTTGGACCTGTGACAATTGCTATAATTTTTTTCATTTAAACTGTCTACAACGATGGGCAAAAGACAGTATATCACAACAAAAATTGCATCAAGACAATGAAATCGGTGGCTACTATACAAATAGCGGTGAATATGTACCGAAACACAATAAATCAATTAAATGGTGTTGTCCAAAGTGTCGATTCGAGTATGAGCCCGTGGAGACACCGCAACATTATTATTGTTTTTGTAAAAAAGAAATTAATCCAGTAAATCATGCATGGTTAGTTCCACATTCTTGTGGTGAAATATGCGGAAAGCCATTAAAATCGGCTTGCTCTCACAAATGCGTTATCCTCTGCCATCCTGGACCATGTCCCCCGTGCGCACAAATTATAACGACTTCATGCGAATGTGAACAATCGAATGTTCGAACTATTCGATGTGCCCAAAATTCATGGAAATGTGGCAAAAAGTGTAAGCAAAAGTTAGCTTGTAACATCCACGTTTGTGATCAACTATGTCATAGACCAAATGAGTGTCCACCGTGTATGAAAAAAAGTCAACAGCCATGTGTATGTGGGAATAAGACACGAGAACGAGATTGTAATAGTTTGATTTGGTCTTGCGATAAAGTTTGCAATAAATTATTCGAATGTGGCCGGCATAGGTGTAAGATTAGATGTCATAGTGGAGATTGTGGAGAATGTCCAAATGGCCTGCCCAGATCCTGCCCATGTGGAAAAGAGAAAACTCAAGCACCATGCAACGTGGATATTGAACCTTGTGGAAACACATGCCAAAAATTACTAAAATGTGAAAGGCATATTTGTGCGGAGAGATGTCATAAGGGAGATTGCGGACAATGTTTGGAGATAATTGAAAAACGATGTCGGTGTGGAACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTGTGGAAAGCATGCCTGTAATCGAAAGTGTTGTGATGGACAATGTCCTCCATGTGATAAGGTTTGCGGAAAGATTTTATCTTGTGGAAAGCACAAATGTTTATCCCTTTGCCACAATGGACAGTGTTATCCATGCGATCTGAGTGCTCAAGTAAAATGCAGATGTGGAAATACATCGATAACCGTATCGTGTGGCCGAGAAAAGAAAACAAAGTCTCCAAAATGCCTTTTACCGTGCAAAATATCCTCGAAATGTCACCATACGAATCCACACAATTGTCATCCAAATGAATGTCCGCCCTGCATACAAAAATGTTTGTTGAAAAATGATGTTACCGGATGCGAGCACCTTTGCCAAAGTAGATGTCATGATGCAGTTAAAACGCAAATTGTGGACAAAAATTTCAAACCAGCCGGTCCATGGGATATTCAAACAGAACGTTATGAAATCAAAAAATTGCCTCATCCGAAATGTGAAGTAAAAGTTGAAGTTGAATGCATTGGTGGACATGAAAGATCGATGTGGCCTTGTTGGAATTCGAAACCAGCTTCTTGCGGGAGAATTTGTGGTCGCTCATTGAAATGTGGCCTACACGTTTGTCAGCTCATGTGCCATGTTGTATTGGATAAAGCATCAACGAAGAGCGATGCGTCATGTGCTGAATGTTTGGAGGGTTGCAAAATATCTCGACCCAATGGATGCGTGCATCCCTGTTCCAAACGATGTCATCTTCCGCCCTGTAATCCTTGTAATATTATGACTAAAACGGCCTGCCATTGTGGCCTTAATCAAGTCTATTATAAATGCTCTGAATTCAATAAAGACGATGATACTCAATCGAAAATTGCCGAAGATCGAGAAAAACGTTTGAGTTGCGGAAATCGATGCATCAGAAATTATTCTTGTGGACATCGATGTATAAACGTTTGTCATTCAGGACCATGCAAAGACGAAGAATTATGTCGCAAGAAATTGAAAGTATATTGCGAATGCAAAAATCGAAAGATTGAAACATCATGTGACAAATTACGGGCTGGATTTCGATTGAATTGTGATGAAACATGCACCTTCCGGAAAGATGAAATAATTCGCGCAGCAGAAGAAATCGAACGAATGAAACGTGAAAAGGAAATGGAAAAAAATCGACTGGAGCTTGAAGAGTTCGAAAAGAAATTTGCAAAAAAGAAGCACAAGGAGAGAAAAACTAAAGTTGTTGAAACTCAAAGTAAAAACCAAATAATCAAATGGATAAGCTGTTGTGTAGCTGTAGCGATTTTATCAATAATAATTTATTTTTTGATTTTGTCACAATCGGTTTGA
- Protein Sequence
- MSSIDKSSNSQRSTNNNSSSDNNPWHLPKEQKPKIGSEKSKKNAKNSVKKFNEVQLEHIKAAKKHIQNYESSSEEEDDDLEYDKLIQSVFKEYNGDQIQLKKTQEFLENVFQSGTATCLICIATVKRSDYIWTCDNCYNFFHLNCLQRWAKDSISQQKLHQDNEIGGYYTNSGEYVPKHNKSIKWCCPKCRFEYEPVETPQHYYCFCKKEINPVNHAWLVPHSCGEICGKPLKSACSHKCVILCHPGPCPPCAQIITTSCECEQSNVRTIRCAQNSWKCGKKCKQKLACNIHVCDQLCHRPNECPPCMKKSQQPCVCGNKTRERDCNSLIWSCDKVCNKLFECGRHRCKIRCHSGDCGECPNGLPRSCPCGKEKTQAPCNVDIEPCGNTCQKLLKCERHICAERCHKGDCGQCLEIIEKRCRCGTXXXXXXXXXXXXXXXXXXXXXXCGKHACNRKCCDGQCPPCDKVCGKILSCGKHKCLSLCHNGQCYPCDLSAQVKCRCGNTSITVSCGREKKTKSPKCLLPCKISSKCHHTNPHNCHPNECPPCIQKCLLKNDVTGCEHLCQSRCHDAVKTQIVDKNFKPAGPWDIQTERYEIKKLPHPKCEVKVEVECIGGHERSMWPCWNSKPASCGRICGRSLKCGLHVCQLMCHVVLDKASTKSDASCAECLEGCKISRPNGCVHPCSKRCHLPPCNPCNIMTKTACHCGLNQVYYKCSEFNKDDDTQSKIAEDREKRLSCGNRCIRNYSCGHRCINVCHSGPCKDEELCRKKLKVYCECKNRKIETSCDKLRAGFRLNCDETCTFRKDEIIRAAEEIERMKREKEMEKNRLELEEFEKKFAKKKHKERKTKVVETQSKNQIIKWISCCVAVAILSIIIYFLILSQSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -