Mdes019587.1
Basic Information
- Insect
- Mayetiola destructor
- Gene Symbol
- grn
- Assembly
- None
- Location
- GL501437.1:613193-625331[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-19 8.1e-16 57.6 6.8 1 35 57 90 57 91 0.97
Sequence Information
- Coding Sequence
- ATGCACACACATTTTTGTAATGGTATCGAAGTATTGAGTAAACATTCGATGCGATATATTGAATCTGGTGAGGAAAAAAAAGGGTACGGATTTTATACTGTTATCGACCAATGGTATAACGAACGATTCATGTCATTGCAAAGTGCAGCCCGGCGTGCCGGAACATCATGTGCAAATTGTAAAACGACCACAACAACCCTTTGGAGACGGAATCAAAGCGGTGAACCCGTTTGCAACGCCTGCGGATTATACTACAAACTACACAATGTTAACCGACCATTAACAATGAAAAAAGAAGGAATTCAAACACGAAACCGTAAATTATCGTCAAAATCAAAGAAGAAGAAAGGAATGGGCGGTGGATGTTTACCGATGGGTGGCCATTTAGGAATGAGCGATTTAATGAAACCATTGGATCCATCCAAAGCATTTTCTGGTGGATTTTCAGCATCGATGGGTCAACATAGCCATCTTTCTGGTTCATTGCATCCAGCACATGCGCATATGCATGGTGGTTGGTATGCTGGTGGTATGGGAGCACTTGGAGCTTCAAATCTACAAGGTGGATTCTCTTCAAGCGGTTTAGGTGGCGGTGTTGTGCCTCATTCACAATCTTATCATCTCATGGGTGCAACATGGGGTCGTGATTATGCGTGA
- Protein Sequence
- MHTHFCNGIEVLSKHSMRYIESGEEKKGYGFYTVIDQWYNERFMSLQSAARRAGTSCANCKTTTTTLWRRNQSGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGMGGGCLPMGGHLGMSDLMKPLDPSKAFSGGFSASMGQHSHLSGSLHPAHAHMHGGWYAGGMGALGASNLQGGFSSSGLGGGVVPHSQSYHLMGATWGRDYA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00671275;
- 90% Identity
- -
- 80% Identity
- -