Mdes019586.1
Basic Information
- Insect
- Mayetiola destructor
- Gene Symbol
- grn
- Assembly
- None
- Location
- GL501437.1:591629-600569[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.5e-20 3.2e-16 58.9 4.7 1 35 263 296 263 297 0.98
Sequence Information
- Coding Sequence
- ATGTCATCATCACACAGTACACAACAGATTTGCAGGCCGCATTTTCATGCGCCGTTACATCCATGGCTCAGTGAACCAAAATCATTAGCTCCTGGTAGCCCGTGGGGCAGTCCATTTGCATGCCCACAAGAGCCACAAGATAAAGTTGGACAAGTAGTACAAAGCCATCAAACAGGTCAACATTTATTTTCATTTCCACCAACACCACCAAAAGATTCCACACCTGATTCAGTACAAACAGGTCCTACCGAATATCAAGCTGCCGTTAATGCATTCATGCATCAGGCACAAGCATCATCAACTACCTCACTACCATCGGATAATTGTTCGTCGCTAGATATTAAACCGTCAATACAACACAATGGTACAAGTCAACAATCCGCACCAAAACAACGTGAAGGTACGACAACATCAGTTAGCAACAGTGGCAATAATAATAGCAATTCAAATAGCAATAATAGCAGTAATATTACAACAACAAATAATTCAAATCAAAATCCAAATCAAAATCATAATCAAAATAGTTCATTAAATGGTGGACTATTCGATAATCAAAATGTATATGGAAATAATGCGTATGAGAATAGCTATCAAAATTTTCATCAGTCAAATGTGGCTGGATTCCAAAGTGGAAATACTGGAACTAGTAATGGTGCAAATATTGTGAATATGCGCATTAATTTGAGTCCGCCACTTCATTCCCATCATCATCATTCGTCGTCTTCGTCGTCGGCTGCCAATAAACCACAACGGACTAAGCCAAGAACCAGTGCCGAGGGAAGAGAATGTGTTAATTGTGGTGCAACATCAACGCCATTATGGCGACGAGATGGTACTGGTCATTACTTGTGTAACGCATGTGGACTTTACTACAAAATGAATGGACAAAATAGACCGCTTATTAAGCCCAAACGAAGACTGGTAAGTTTCACTAAAGTTTATTTTCATACAACAACAACAAAAAAAATATTCAATTACAAAAAAGGAAGGAAAAAAGAAACTAAAGTAAAACTGAATTGGAATTCCTAG
- Protein Sequence
- MSSSHSTQQICRPHFHAPLHPWLSEPKSLAPGSPWGSPFACPQEPQDKVGQVVQSHQTGQHLFSFPPTPPKDSTPDSVQTGPTEYQAAVNAFMHQAQASSTTSLPSDNCSSLDIKPSIQHNGTSQQSAPKQREGTTTSVSNSGNNNSNSNSNNSSNITTTNNSNQNPNQNHNQNSSLNGGLFDNQNVYGNNAYENSYQNFHQSNVAGFQSGNTGTSNGANIVNMRINLSPPLHSHHHHSSSSSSAANKPQRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLVSFTKVYFHTTTTKKIFNYKKGRKKETKVKLNWNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -