Mdes004382.1
Basic Information
- Insect
- Mayetiola destructor
- Gene Symbol
- ZFY_2
- Assembly
- None
- Location
- GL501486.1:643478-645905[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.47 39 5.3 3.0 2 23 139 163 138 163 0.89 2 17 1.7 1.4e+02 3.6 3.8 1 23 169 192 169 193 0.90 3 17 0.11 9.4 7.2 1.6 1 23 256 281 256 281 0.97 4 17 0.023 1.9 9.4 0.0 2 21 288 307 287 308 0.92 5 17 3.2 2.6e+02 2.7 8.0 1 23 315 339 315 339 0.90 6 17 4.4e-05 0.0037 18.0 0.8 1 23 345 368 345 368 0.98 7 17 0.042 3.5 8.6 1.8 1 20 371 390 371 392 0.94 8 17 7.4 6.2e+02 1.5 0.8 1 21 398 420 398 423 0.71 9 17 0.0077 0.65 10.9 0.2 2 23 430 454 429 454 0.93 10 17 0.18 15 6.6 0.2 1 20 460 479 460 481 0.80 11 17 0.26 22 6.1 1.6 2 23 488 510 487 510 0.91 12 17 0.002 0.16 12.8 2.6 1 23 516 538 516 538 0.97 13 17 0.066 5.5 8.0 2.2 3 19 548 564 547 567 0.94 14 17 0.17 15 6.6 2.3 1 16 572 587 572 595 0.84 15 17 0.35 29 5.7 5.0 1 23 601 624 601 624 0.91 16 17 0.064 5.3 8.0 0.5 1 21 630 650 630 651 0.95 17 17 0.018 1.5 9.7 0.0 1 20 665 684 665 686 0.95
Sequence Information
- Coding Sequence
- ATGAACAAATCACAGGCAAAGCGACGAAAACTCAATTATGGTGATTATATTGCGCCGATAAAAATTGAACCACCGGGCGATGATGTGATGATTAAAATGGAACCATTCGATACTTACGAGCACGAAGATATTTGTTCAATGCCAGAAACGAATGACAATAGTCAAATGGACGATGAGGAAATGGGTTTGATATCTGAATTGGAATTCATAAAGAGTGAAATCGATGTGGATGAATCAATGTTAGCCGATTTTCGTTCCGAAATTTTGCAGGAATCAAAGCGACACGAAACCATAGGACAGCCAGTATTTTCAACAATAGATTATGATCCAAACCTAAGATTGCGCGGCAGAAAGGACAAACCGTCAAAGAACATAATTGATGGCACATTTATGCGAAAGAAAAAGGGCATTATTGTGTGTCCGTTTTGCGACTTCAAAACCACAACTAGAAATCGTTCGTACTTTTTGAAGGACCATATGCGAATCCATACGGGAGAAACTCCATTCAAATGCGATTATTGTAATTTTTCATCAAGATTAAGTCAGACGCTACGCTTTCATGTAAAGAATGTGCATCACGTAACCGCTTTACGCTGCGAATTGTGTCGTATTATAATTTTTGATCAGGAAAAGTTTGATGCCCATAAATTTGAATGCGTTAAAGTACGATCGTTTGAATGTCATTTGTGCAAAATTACGTATAAACGAGTTCAAAAGCATAAAATTCGAGAACATATGCGACGTGCTCATACTGGTGAGCAAGTGTTCCAATGCACAGTCAAAAACTGTCCGGATAAGTTTGTCACAAGAGCCAGACTTTCACATCATTTACAACGCGTTCATCCAAACACAATGGCACTAATTTGCTCCGTTTGTGATCTTCGATTCAATGATGAGGAGAAATTAGCTCTTCATGAACGTAATTGTAAGATGCGAATACGGTATCAATGCCATTTATGTGGTTATTCATATTTGCGTATGACGTTATCTTGCCTGAAGATGCATATGAGAAAGCACACCGGTGATAAGCCATTCAAATGCAACAGCTGTTCAAAGTTCTTCCCACGCGAAGAAGCTCTCAATCAACACTTGCAACGTGCTCACTACACTTTCCAATGTCGTCGATGTCATCGCCGATGTATCGACGCAAAAGCCCTGGAAACTCATGAAATGTATTGCAGACGACGACGCTATGAATGTTATATGTGTGGCTTCAGTCGATTTGGAATTAGTTTTTCCAAGTTTCGGCGACATGTGGTTATCAAACACACAGGAGAGTCTGGTATTAAATGCCTGAGCATTGATTGTCCAAAACGATTCGCTTCGAAAGACGTATTTGGAGCTCATATTAAACGCAATCATCCGGAACTATTGAAATATCTGTGCCTCATTTGCAACAAATCTTTCAAAATCACGGCCGCAAAGAAACTGCATCAGAATGATTGCGCACGGAAGCGCATTGAATGTTATTTGTGTTATCAAACTACCTCAAATATGAAAAAATTACGAATCCATATGGTTCATTCGCATACAGGAGAGAAAAAATATCATTGCGCTAAATGCTTGAAATCTTTTCAAATGGAAGCTAATCTAAAAATTCATATGAAATTTCACACCATCAATAAAAAGGACTTACCCGCATGCAATTATTGTCACAAGTATTTTATCGACAACAAATATAAGAAAAAGCATGAATTTCAATGTAAAAAGATATATGAATGTTATTTATGCAAGAAAACATTTCCGAATTTCACTCAGCTTTATGAAAAACATTTTCGACTTCATCTCGGCGAACGTCCATATCAATGTAAATATTGTCATAAGACAATAGCCAGCATACGATGCTACAAGTTGCATGTCATCAATTTTCATCTAGCTTCATTCAAATTCAAATGCAACGAATGTAATAATATTATTGTGACTAGAAAAGACTTTCGATTGCATCAGCAAAATTGCATGAAACCGATCCGTCAATCGGCAAACGTTTTTTATTTTTCCTGCTCATTGTGCGGCATCGGATTGAAGCGATTGCCCCAATTGAGAGATCATATCATTTTTAACAAATGCAAAAAACATCCACAATTACTATCAGCGAATATGGTTCCATCCCAGACCCGAAAGCGAAAAAATCAGTCCAAGTGA
- Protein Sequence
- MNKSQAKRRKLNYGDYIAPIKIEPPGDDVMIKMEPFDTYEHEDICSMPETNDNSQMDDEEMGLISELEFIKSEIDVDESMLADFRSEILQESKRHETIGQPVFSTIDYDPNLRLRGRKDKPSKNIIDGTFMRKKKGIIVCPFCDFKTTTRNRSYFLKDHMRIHTGETPFKCDYCNFSSRLSQTLRFHVKNVHHVTALRCELCRIIIFDQEKFDAHKFECVKVRSFECHLCKITYKRVQKHKIREHMRRAHTGEQVFQCTVKNCPDKFVTRARLSHHLQRVHPNTMALICSVCDLRFNDEEKLALHERNCKMRIRYQCHLCGYSYLRMTLSCLKMHMRKHTGDKPFKCNSCSKFFPREEALNQHLQRAHYTFQCRRCHRRCIDAKALETHEMYCRRRRYECYMCGFSRFGISFSKFRRHVVIKHTGESGIKCLSIDCPKRFASKDVFGAHIKRNHPELLKYLCLICNKSFKITAAKKLHQNDCARKRIECYLCYQTTSNMKKLRIHMVHSHTGEKKYHCAKCLKSFQMEANLKIHMKFHTINKKDLPACNYCHKYFIDNKYKKKHEFQCKKIYECYLCKKTFPNFTQLYEKHFRLHLGERPYQCKYCHKTIASIRCYKLHVINFHLASFKFKCNECNNIIVTRKDFRLHQQNCMKPIRQSANVFYFSCSLCGIGLKRLPQLRDHIIFNKCKKHPQLLSANMVPSQTRKRKNQSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -