Basic Information

Insect: Mayetiola destructor
Gene Symbol: -
Assembly: None
Location: GL501433.1:636394-646519[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 6 5e+02 1.8 1.1 3 23 355 377 354 377 0.90

2 15 10 8.3e+02 1.1 0.8 2 23 456 476 455 476 0.80

3 15 3.8 3.2e+02 2.4 0.5 1 19 506 524 506 530 0.78

4 15 1.1 89 4.2 2.0 3 21 542 560 540 564 0.92

5 15 0.0071 0.59 11.0 0.5 2 21 586 605 585 606 0.94

6 15 0.017 1.4 9.8 0.5 1 23 624 649 624 649 0.97

7 15 0.71 60 4.7 2.2 1 20 654 673 653 678 0.87

8 15 0.0016 0.13 13.1 0.1 1 21 721 741 721 742 0.97

9 15 0.0097 0.81 10.6 1.3 2 23 865 885 864 885 0.94

10 15 0.00044 0.037 14.8 1.1 1 23 891 916 891 916 0.96

11 15 0.011 0.9 10.4 5.1 1 20 942 961 942 964 0.95

12 15 0.014 1.1 10.1 0.1 1 23 973 997 973 997 0.98

13 15 0.00039 0.033 15.0 0.7 1 23 1003 1028 1003 1028 0.95

14 15 0.41 35 5.5 8.7 2 23 1037 1058 1036 1058 0.96

15 15 0.00032 0.027 15.2 1.5 1 21 1064 1084 1064 1089 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	6	5e+02	1.8	1.1	3	23	355	377	354	377	0.90
2	15	10	8.3e+02	1.1	0.8	2	23	456	476	455	476	0.80
3	15	3.8	3.2e+02	2.4	0.5	1	19	506	524	506	530	0.78
4	15	1.1	89	4.2	2.0	3	21	542	560	540	564	0.92
5	15	0.0071	0.59	11.0	0.5	2	21	586	605	585	606	0.94
6	15	0.017	1.4	9.8	0.5	1	23	624	649	624	649	0.97
7	15	0.71	60	4.7	2.2	1	20	654	673	653	678	0.87
8	15	0.0016	0.13	13.1	0.1	1	21	721	741	721	742	0.97
9	15	0.0097	0.81	10.6	1.3	2	23	865	885	864	885	0.94
10	15	0.00044	0.037	14.8	1.1	1	23	891	916	891	916	0.96
11	15	0.011	0.9	10.4	5.1	1	20	942	961	942	964	0.95
12	15	0.014	1.1	10.1	0.1	1	23	973	997	973	997	0.98
13	15	0.00039	0.033	15.0	0.7	1	23	1003	1028	1003	1028	0.95
14	15	0.41	35	5.5	8.7	2	23	1037	1058	1036	1058	0.96
15	15	0.00032	0.027	15.2	1.5	1	21	1064	1084	1064	1089	0.93

Sequence Information

Coding Sequence: ATGCTCGAGGATTTGGAAGATGATACGCATTTATGTATTAAATGTAGTCAGACGATTGTTGGTTTGGAGCATTACGTACAACACCGAAAAAATAATTGCAATAAAAGTAGTGCGGTGTCAACGTCATTGAATCGTGAAATAATTGACACCAGACATCCATATCAGTCGTTTGGATTCAATGAACCATCATCGTCTGTTGTGAAACATGATAAGCAATATAATTTCAATTATGAAATTGAATCGGTTCACCATGAACACGATAATGTTGTATCAGATGCAAGACATATTTTGCCATCACCAATGCATACATCAGAGAAAGCTAGCGATTATAAAACTGATCCAAATAAATCATTAACGGAGAGCTATGATTATAATTATGGGCTCGGTGCAGATGTATTTTTTTCATTATTAAATTTGCAAAGTAGCTCAAAAACAAGGACACATACCATAACATCGAATGCTGCCGTTGACAATGCATCGACATCAATGATTAAAAGTGAAAGTGAAAGTGAAAAGATCATGCATTCAAAAGCAAATGACACAACTGACACAACTGATTTGTCACACAGCAGTGGACATATGGATGATTGGATTGGATCAGGTGCGGCAACATCAAGCGGCACTGATAAACTTATGAAAGCTGTTAACGAAATAAGTGGAACAAAAAAGCTAACATATGATTCACCACATTATTCATTTGAATATTCACATGGTTCACCGGACGTTTGTCCACGTGCTGAATTCGATGAAGATGAAATCGATGACGACAATTCTCATTGTGATCTCGTTGAAGAAGATGATGATATGATACCACCACCTACACATACTGGAGGAAAATGGCGACCATCTGAACGGAATCATCAATCGACTTCGCGATGGTATGAGCGCTGGGATAGTCATATACACATGGCCGGCTCAACGACTGGATCAAATGAAGAGTTGACTGATAATGTTGATGAATTCGATCCACCACCATCGTATACAAAAGGGAAATGGTATCCAGGGGCTAAAATCCTTAAATTGGAAAGACATGACTCGGACATGTTTTCGGAACAATTTTGGTGTCGATCATGTAACCGGAAATTATCGTCACGCATTGTATACGAAAGACATTTAAAATCGAAATTGCACACAAAACGATCGCAGCCAGAAAATGATTTAGAAATGGCTTCGCTACCGTTGCCATTGCAATTGCCACATATCGATGATGCGATCACAGGTGAACAGATGAAAATGCAAACCGCTGCTAGAGATACAAATCAAACACAAAGAAATAAAATAAAAGATGAAACAGCAACATATTATATAGATGAGCTTGGTTCGTATGTTATCAAAAAGAAACGAAAGCGACGTTTCAATTTTATTAAATGTAATGTGTGTAAAACCAGATTGCGAACATTTTTATATGGCAAACATCTTATTTCACATTATCATTATCGACGTATGTTCAAGAATCCAACGGAATCATATGCAATAATACTAAATAATATATATCGTATCGTACTACAATCACCATATCAATGTAATATCTGTAAATTTTATGCAAACACCGAAGAAATGTTTTTATATCATTGGGATTCAACGGATCATACATCAAATTGTAATGACCATGAAAGTTTCTGGTGCTCATTTTGTAAATTTGTTTGTCGAACGAATAACGAAATGCGTGTACATTTGATTGGAAGAACACATCAAGAAGTGATATTAGCAATCAATCGTTCCGTTCCAATAATTATACGGCCAAAAAGATTGATAAAATGTGAAAGTTGTCATCAGGAATTCTCATTCAATATCGAATTACGCAAACATGCGCGTATTTGTTCTGCATCAAGAGCATTAGGCACGGCCTCAGATCAATATCAGGGCAAGTATTATTGCAATGAGTCAATGTGCAATCAATACTTTGCATCATTGGTTGTATATCAAAGACACATGAATTCAATTCATGCAATAAAATGTTATTTCTGTGGACCATGTCACTTATCTTTCACTGATTCCGAAGAAGCTAAACGTCATCGCGTTTCTTCCGAACATAAAATCCATGCAGCGCGAATCCGAGACAAAAAATCACTTAAAAAGAAATGTATGGCTTGTGGGTTGATTCAAGATGATTTGCTTCTCTTGAAAGAGCACCTGAGAAAAATCCATCCAGACATTAATTATCCATGCTATTTATGCGGACAGAAGTTTATTTTACCTCAAGAATTGAGTCGACATATTCGAGATAAAGTATGCAAATACGAAAAACTACATACAAGTGTTGAAAGCTTGGAGCAGGAACAAAGTGGTGTATCATTACTAGAGCTACCAGTCATCACCGATATGGCTCATGATGTTGAAGTCCCTGATTTGATTGTTGGTTCTGAGCCTCATTCGAAAATTTTGCATACGCAGAGTGTTGAGACTTATGTGGAGAATGATTTTAAGTTACAAAAAGATTCGAGCCCCGTCAATGAAAATACACAGAGTTCCACAGATGAAATTTCTGTGCTTTGGGCCTGTAGACAATGTGATTTTCGTACACCGACAGAGGCCGAATGCATTTTTCATGAAATGTTGCACAAGTGGAATATTTGCAATAATGGTAAGATTCCGTGTCCAATTTGTGATAAATTATTTAGCAAATCATCATTACGATGCCACTTGAGATTACACACGAATGAACGGCTATTTAGTTGCACAACGACAACGTGTCCCTTAAAATTCATACGGAAGTCAAACATGAAAGAGCATATTCAAAGGATTCATATGAAGACTCCGACCGAGAAAAATTCAACAAAAAGACGACTGAAGCGAACTTCATCAATGCAACATAATGATCATTATGTTTGTGGAATATGCAAGAAAAAATTTCAGAAAAAGAATTTATTGGAACAGCATATGCACTGTCACAAGGAAGTCATTTCAGTCAAGGTCTTTAAATGTCCTGAAAGTGATTGTTTGTTCAGTGGTAGAAGTGCAGGTGAATTGCGTGTTCATCAAGCCACACATTCAACGGAAAAAAAATTCGCCTGTCCATTTGAGACATGCGACTACCGTACAAAGACGAATGCCCTACTCAAACGTCATATAAAGTCCCAACACCAGGATAACTCGATGAATATGCTACATTGCTCTCATTGCAACTTCAAAACTACGATCTCGAGTCACATGAAACGACACACTCGCATTCATGCAGGAGAACGTCCATATCAGTGTCCACACTGCACATATGCATCCAATAACTCGGAGAATCTACGAAAACATGTCATTAGTACTAAAAAGCATCCAGGACGATTTTTGTATGAATGCAAGCTTTGCTCAGAAACTGACGATAAACAACCATTCGCAACAAATATTTCAAAAGATTATAAATTTCATCTTCATAAAGTTCATAATCAGAAGAAATAA
Protein Sequence: MLEDLEDDTHLCIKCSQTIVGLEHYVQHRKNNCNKSSAVSTSLNREIIDTRHPYQSFGFNEPSSSVVKHDKQYNFNYEIESVHHEHDNVVSDARHILPSPMHTSEKASDYKTDPNKSLTESYDYNYGLGADVFFSLLNLQSSSKTRTHTITSNAAVDNASTSMIKSESESEKIMHSKANDTTDTTDLSHSSGHMDDWIGSGAATSSGTDKLMKAVNEISGTKKLTYDSPHYSFEYSHGSPDVCPRAEFDEDEIDDDNSHCDLVEEDDDMIPPPTHTGGKWRPSERNHQSTSRWYERWDSHIHMAGSTTGSNEELTDNVDEFDPPPSYTKGKWYPGAKILKLERHDSDMFSEQFWCRSCNRKLSSRIVYERHLKSKLHTKRSQPENDLEMASLPLPLQLPHIDDAITGEQMKMQTAARDTNQTQRNKIKDETATYYIDELGSYVIKKKRKRRFNFIKCNVCKTRLRTFLYGKHLISHYHYRRMFKNPTESYAIILNNIYRIVLQSPYQCNICKFYANTEEMFLYHWDSTDHTSNCNDHESFWCSFCKFVCRTNNEMRVHLIGRTHQEVILAINRSVPIIIRPKRLIKCESCHQEFSFNIELRKHARICSASRALGTASDQYQGKYYCNESMCNQYFASLVVYQRHMNSIHAIKCYFCGPCHLSFTDSEEAKRHRVSSEHKIHAARIRDKKSLKKKCMACGLIQDDLLLLKEHLRKIHPDINYPCYLCGQKFILPQELSRHIRDKVCKYEKLHTSVESLEQEQSGVSLLELPVITDMAHDVEVPDLIVGSEPHSKILHTQSVETYVENDFKLQKDSSPVNENTQSSTDEISVLWACRQCDFRTPTEAECIFHEMLHKWNICNNGKIPCPICDKLFSKSSLRCHLRLHTNERLFSCTTTTCPLKFIRKSNMKEHIQRIHMKTPTEKNSTKRRLKRTSSMQHNDHYVCGICKKKFQKKNLLEQHMHCHKEVISVKVFKCPESDCLFSGRSAGELRVHQATHSTEKKFACPFETCDYRTKTNALLKRHIKSQHQDNSMNMLHCSHCNFKTTISSHMKRHTRIHAGERPYQCPHCTYASNNSENLRKHVISTKKHPGRFLYECKLCSETDDKQPFATNISKDYKFHLHKVHNQKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -