Basic Information

Insect: Mayetiola destructor
Gene Symbol: L
Assembly: None
Location: AEGA01019985.1:3169-5575[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.022 1.8 9.5 0.2 2 23 31 52 30 52 0.96

2 14 0.00026 0.022 15.5 1.2 1 23 61 83 61 83 0.97

3 14 0.00042 0.035 14.9 1.8 1 23 91 115 91 115 0.90

4 14 2 1.7e+02 3.3 0.0 2 23 121 143 120 143 0.89

5 14 0.071 5.9 7.9 0.4 1 23 150 173 150 173 0.97

6 14 9 7.5e+02 1.2 1.4 2 13 183 194 182 204 0.68

7 14 0.00047 0.039 14.7 1.3 1 23 208 230 208 231 0.96

8 14 9 7.5e+02 1.2 0.1 3 23 368 390 367 390 0.76

9 14 0.00032 0.027 15.2 1.3 2 23 399 421 398 421 0.96

10 14 1.6 1.3e+02 3.6 0.1 1 23 426 448 426 448 0.93

11 14 0.49 41 5.2 0.2 2 23 456 477 455 477 0.96

12 14 0.00075 0.063 14.1 0.1 2 23 578 599 577 599 0.95

13 14 0.027 2.3 9.2 3.4 1 23 609 631 609 631 0.98

14 14 0.52 44 5.1 0.5 1 23 638 660 638 660 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.022	1.8	9.5	0.2	2	23	31	52	30	52	0.96
2	14	0.00026	0.022	15.5	1.2	1	23	61	83	61	83	0.97
3	14	0.00042	0.035	14.9	1.8	1	23	91	115	91	115	0.90
4	14	2	1.7e+02	3.3	0.0	2	23	121	143	120	143	0.89
5	14	0.071	5.9	7.9	0.4	1	23	150	173	150	173	0.97
6	14	9	7.5e+02	1.2	1.4	2	13	183	194	182	204	0.68
7	14	0.00047	0.039	14.7	1.3	1	23	208	230	208	231	0.96
8	14	9	7.5e+02	1.2	0.1	3	23	368	390	367	390	0.76
9	14	0.00032	0.027	15.2	1.3	2	23	399	421	398	421	0.96
10	14	1.6	1.3e+02	3.6	0.1	1	23	426	448	426	448	0.93
11	14	0.49	41	5.2	0.2	2	23	456	477	455	477	0.96
12	14	0.00075	0.063	14.1	0.1	2	23	578	599	577	599	0.95
13	14	0.027	2.3	9.2	3.4	1	23	609	631	609	631	0.98
14	14	0.52	44	5.1	0.5	1	23	638	660	638	660	0.94

Sequence Information

Coding Sequence: GAATCCTATTCATCGATGATACGCCGTTTTGAAAAACAATCCAAAGCTACCAAAGATCATTCGATCGCAAGAGAAAATGCCGATTTATTGCGCTGCAATCAATGCAATTTGGTATCGCCGAATTTTGAAGCTTTTCGTGAACATCTTCGCGGTCATTTGGCACGAGGTGAATCAAAAAATTTTGTTTGTTTCCATTGTGGTACACCGTTTAACAATCAAAACGAATATGAATTACATGTTTCATCACATTTTTTGATCACATCCACCGAACATGCATGCAATTTTGGATGCAACAAACAATTCGAAAATTCAGATTCACTTCAAAAGCATTTATTTGAAATGCATGCACAAAATGTTTGGAAATGTGGAATATGTTATGAATTATTCGAATCAAAAGTAGGCATTCAAATTCATTTTGCCGTTGCTCATGCAAATAAAGAGAAAACATTTCGATGTTCGGCGTGTATTGAAGCTTTTGAAACGGAAACCGATTTTAAAAACCATGTACGAAGTCAACATGCTTTAATGTTCTCATTACCAAATTTACAATGCCCACTTTGCCGAACCGTATGCTCGTCTGACCTAGAAATGCATTTTCATTTGGCAACACATCCACGACAATATCGTTGTACTTTGTGCCCTGATTCATTCAATGTTGAATTTTTGTTGGAACGGCATATGCAAATGCATCATTCGTCAACCGAAAAAGAAACAATACCGATTCCATTCAAAATTGATAATTTGAATAATAATATTTTCGATTATAATTATTCGAATGCGAAAAAATTATATCCATTTGCAGCATCGGCTACAAATAAAATGTTCGATCCGTTGAACATTCAAGCAACAAGTTCGATGAAATTGCCACCGCCGTCTTTGTATGAATTGTATGACAATTTGGGCAAATCATTTTACGGTGAAATTGCAGCCAATAAACATTTTATGAATTTTTATAAAACCGATTATGCATCAAAGATGAATATGAGATCGAATCCATTGGTTTTACTTCCAACACATTCATCAGAACTGCATCAGATGTCGGCCATTGAGCAGAGAGAATATTTTGATAAGAAAACGCCAACCATTGAGCAAACAGTTCCATGTGGGATCTGTGAACGAAGCGATTTTCAAAGTGAAGCAGAGATGCAAACTCATCAGAAAATCGCCCATAATATCAAAACAGGGGTCAGTTTACGATGCGCCTATTGTAATGATAATTTTCGATCGAGGCATGATTTGGAGAATCACATGAAAGTGGCTCACACGGGTGGCAAACACAAATGTTTGATTTGTGACGATATCTTCCCATCGCCGAACATTTTGGCCGAACACAAACTGAGCCATTCCCGTATCGGTGTTCGTGGCAAATGTGCATATTGTTCAGCCAATTTGACGGACATCCAAAGTTTCAAATTGCATATGACTGAGCATGGAAATGTGGATTTACCGGTTCAATGTATTTGCTGTCGACAAACATTGAATTCAAATTATGAAATTGAATTACACGCCAAATTTCACATCAAAAGCGTTGAAACCATTGAGAAAAAAACCTGCGAGCTATGTTTGGCACCATTATCATCTGCTACCGGAATGAAAGTATGCAAGAAATGTTATGAAAAGCACAGCAATCAATCGGGTAAATTCATTGCTCATGGACCGGGATTATATACAAAACGAATAACACCTGAACACGACCATAATCAAGTCAAACCGGACCCAATAAATGAACAATATTGCAATTTGTGCAAGAAAATATTCGCAACGGTTGCCGAACTGGAGAACCATTTAATCGAACATTCGTTTCAAGGTTGCGAAGAACGTGGCTATAAATGTTACATTTGTTCATCTATTTTTACACTTACAAGTGGTTTGCATCATCATATGCTAGAGCACGGTTCCAGTTATCGTCCATATGATTGTAGCTTCTGTCCGAATAAATATTTTTTCCGTGCTGAATTGGACAATCATTTGATTGACCATGAAAATGAAGACAATGGGTTGGAACCAAAAAGCGGTTCATCAAATTTAGCAATCAAATCGGAAATAAATGCGGAACAAAATTACCAGAAACCCGATGAAGATGATGAATATATTGAAGTAGAACAAATGGAGTTCCAAGAACAAAATATTGATAAGAATCAAAGTGAACGAATTGATGAACATGATGGAACCGAAACGCATTAA
Protein Sequence: ESYSSMIRRFEKQSKATKDHSIARENADLLRCNQCNLVSPNFEAFREHLRGHLARGESKNFVCFHCGTPFNNQNEYELHVSSHFLITSTEHACNFGCNKQFENSDSLQKHLFEMHAQNVWKCGICYELFESKVGIQIHFAVAHANKEKTFRCSACIEAFETETDFKNHVRSQHALMFSLPNLQCPLCRTVCSSDLEMHFHLATHPRQYRCTLCPDSFNVEFLLERHMQMHHSSTEKETIPIPFKIDNLNNNIFDYNYSNAKKLYPFAASATNKMFDPLNIQATSSMKLPPPSLYELYDNLGKSFYGEIAANKHFMNFYKTDYASKMNMRSNPLVLLPTHSSELHQMSAIEQREYFDKKTPTIEQTVPCGICERSDFQSEAEMQTHQKIAHNIKTGVSLRCAYCNDNFRSRHDLENHMKVAHTGGKHKCLICDDIFPSPNILAEHKLSHSRIGVRGKCAYCSANLTDIQSFKLHMTEHGNVDLPVQCICCRQTLNSNYEIELHAKFHIKSVETIEKKTCELCLAPLSSATGMKVCKKCYEKHSNQSGKFIAHGPGLYTKRITPEHDHNQVKPDPINEQYCNLCKKIFATVAELENHLIEHSFQGCEERGYKCYICSSIFTLTSGLHHHMLEHGSSYRPYDCSFCPNKYFFRAELDNHLIDHENEDNGLEPKSGSSNLAIKSEINAEQNYQKPDEDDEYIEVEQMEFQEQNIDKNQSERIDEHDGTETH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -