Mdes010694.1
Basic Information
- Insect
- Mayetiola destructor
- Gene Symbol
- -
- Assembly
- None
- Location
- GL501511.1:1424-10965[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 33 0.0006 0.051 14.4 0.6 1 23 209 232 209 232 0.96 2 33 3e-05 0.0025 18.5 0.3 1 23 238 261 238 261 0.94 3 33 0.0098 0.82 10.6 0.9 2 23 269 291 269 291 0.92 4 33 0.069 5.8 7.9 0.1 3 23 472 495 471 495 0.90 5 33 1.6 1.4e+02 3.6 4.1 1 23 528 553 528 553 0.92 6 33 0.0077 0.65 10.9 0.7 1 23 560 582 560 582 0.95 7 33 0.75 63 4.6 4.2 1 23 588 612 588 613 0.93 8 33 0.00083 0.07 13.9 0.3 1 23 622 646 622 646 0.97 9 33 0.0023 0.19 12.6 2.9 1 23 657 679 657 679 0.98 10 33 0.2 16 6.5 0.4 1 23 684 707 684 707 0.93 11 33 0.14 11 7.0 0.1 2 16 713 727 712 729 0.82 12 33 0.92 77 4.4 0.8 3 23 911 932 909 932 0.91 13 33 1.3 1e+02 3.9 2.9 1 23 965 987 965 987 0.95 14 33 0.00044 0.037 14.8 1.1 1 23 995 1018 995 1018 0.95 15 33 0.74 62 4.7 4.9 1 23 1024 1047 1024 1047 0.95 16 33 3.7 3.1e+02 2.5 0.4 6 23 1076 1094 1071 1094 0.93 17 33 0.053 4.4 8.3 4.9 1 23 1127 1149 1127 1149 0.98 18 33 0.13 11 7.0 3.8 1 23 1168 1191 1168 1191 0.94 19 33 0.38 32 5.6 0.4 2 23 1211 1233 1210 1233 0.94 20 33 9.5e-05 0.0079 16.9 0.2 1 23 1266 1289 1266 1289 0.98 21 33 6.5e-05 0.0054 17.4 1.7 1 21 1294 1314 1294 1317 0.94 22 33 0.55 46 5.1 3.8 1 23 1324 1347 1324 1347 0.95 23 33 0.011 0.88 10.5 0.9 1 23 1437 1459 1437 1459 0.99 24 33 2.7 2.2e+02 2.9 1.1 1 23 1467 1490 1467 1490 0.97 25 33 0.074 6.2 7.8 0.1 2 23 1526 1550 1525 1550 0.91 26 33 0.057 4.8 8.2 1.4 1 23 1583 1608 1583 1608 0.93 27 33 0.02 1.7 9.6 0.3 2 23 1616 1637 1615 1637 0.93 28 33 0.00052 0.044 14.6 3.5 1 23 1643 1667 1643 1668 0.95 29 33 0.00083 0.07 13.9 0.3 1 23 1677 1701 1677 1701 0.97 30 33 0.00037 0.031 15.1 1.5 1 23 1712 1734 1712 1734 0.99 31 33 0.00099 0.083 13.7 0.1 1 23 1739 1762 1739 1762 0.97 32 33 0.00014 0.012 16.3 0.8 2 23 1768 1789 1767 1789 0.95 33 33 1.4 1.1e+02 3.8 3.4 2 23 1796 1818 1795 1818 0.93
Sequence Information
- Coding Sequence
- ATGGAAACAACAACGGGTGAAATCTGTTGTCGTTTGTGTTTTTGCTCGAATGGCAATTTCTTAAATATTTTCAATGATGTACCGTCTGTATTTGATATTGCCGAACTTTTAAAGAAATACTTTCAAGATGAAGTCCACCTTTCGGATCCACTGCCAAATATTATTTGTAGCGACTGTTGGCATAAAACTGAATCATTTCATGAATTTCATGAAAAAGTTTTGAGCGAACGTGATAAGTATTTGAGTTCACATCTATATGAAATGGTCATCAAAATGGAACCGGGATCAATGTTGGTTGCGGAGGCTTCCGATGGACAATATGATGACTTCGATGTGAATATGTGTGTTGAGACAATAACAGTCAAATCAATGTCCGTTGATGATCAGGATGAAGCATACGATGGGAATACAAGAATTGCTGATAATAAATCAATTATAGATGTAAAAACTAATCAAAATGACCTATATTTTTGGTCCGAGAAAGAAGAAATCAAGGAAGAAAATGTTCAAAATCATTGTAGCCTTCGACTCAAGAGCAAGAATCATATAAAATTGCATTTAAAACCAGACATATTCGAAAAAAATATACTATCCCATGCCCGAACCGTTAATCCAAGTCGTTCGTACATCTGCGATATTTGCCAGAGAAGTTACAAGGAAATGAGAAATTTACAATCTCATATATATCGAATACATCAGACATGTGCTTCATTCATTTGCGATATTTGTCAGAAGAGTTTCAAAACAAAGGTGGAAATGAAAAGCCACATATTGGCTGTACATGTTCATGCTAAAACGAATGAGCGGTGTGGTCTCTGCGAAGAAAAATTTAAAACTTTCAAGCAACTAAATACACATTTGGAAGCCAATCATCCTGAGGACTTGAATAGCATTGAAAGTGACGTGAAGAATATTTCCGTTTTGGACCGGAATAATGAACGACTGAAAGAAGCGCTGCAAACATTTGTCGATCAAACGTGTGACATTTGCCATGTGAAATTGGATTCATTGGCTGTAGCAAGAATTCATTATATAGTCGAACACAAAAAACAACTAGGTTATTTCAAATGTTGCAAATCTAAGCATTACTGCGAGACAAATCTTATCGATCATCTCAACTGGCACGTGAACCCAAAAATATTCACATGCCGCTTATGTCGAAACAAAATGTTTGGAAGTCGAAGAATATTGATGGCTCATGCAAATGAGCACAAAGCATTACAATGCAAAAAATTCACTTGTCGCACATGTTCAGATATTTTTCCAAGAATTGAAGACTATAGATTTCATATGGAAACCAAGCATGGTGTCACAATACCCAAGCAAAAGTGCTTCCGACATGAATCGGCCTCGAATTCCTTGGCTGATCCGGTAGATGATGAAATTCGGAATTCATTATTTTTCGATATGATATGTGATGTGGATGGTTGTACAACGGTGTTTACATCGCTATCAAATGCACGAACACATTACTTAAATGTACACACCATTCCCAATGGTTACATTAAATGCTGTGACATGAAACTTAAAACTCAAGTCGATGTCAAGGATCATATTGCCTGGCACAAAGATCCGGAGTGTTTCAAATGCACAGACTGCACACGCCATCATACTTATAAAAGTAGTCGAGCACTTTCAAGACATGCGATGGAGCTACATTCAAAAATATCATTAGTTCATAAATGTATCATATGTCAAAAAAGGTTTAAGGAAAAGGCAGAATTGGATGCACATATATTGTTGCATCAGAACAAACCGAAATTTCATTGCCCGGAACCGAATTGCGACAAAAGTTTCTTCAAAGAAGGCTATTTGAAATTCCACCGTGAGCGTCATCACCATCCGACAACTAAAAAGAAAAATTACATCTGTGAAGTGTGTGGAGCAGAAAAGTTTAAAACTTTCGTTCAACTTAAAAGACATTTGAACACCGTACATAAGCAAGGACCACAAAGGCCTAAGCAAAAACATCAATGTGACATTTGTTTAAAATTTTATTCATCTCAGGGGAGTTTGTATACGCACAAATTAACTCATAATTCTGAAATCCATAAATGTACCTTATGTGAAAAGGTTTCACCGAATGCGGCCGCATTAGTGTGTCATATGAATGCGGTACATGTTGAAAAAAAGTTAAAGTGTACACTTTGTGATAAGACATTCAAGTTGGCACCAGCGCTGAAGGTCTACCTATCAGATCCACTGCCAAATATTATTTGTAGCGATTGTTGGCGTAAAACGGAATCATTTCATGAATTTCATGAGAAAGTGTTGAGCGAACGTGAAAAGTATTTGAATTCACATTTTGATCATGTTGGGGTCAAAATGGAACCGGAATCATTTTTGGTTGCGGAAGTTACGGAAGATCAATTTGATGAGTTCGATGTAAATATTTGTATTGAACCAATAACATTGAAACAAATTCATGTTGATAATAATCAGGATAAAGTACATGACGAATATGAACCATCAGGTTTAGGTTATTCATTAAAAGAAGTTGACTTGTCACTTGCCATAGATGATGATGGATCCAAATTGAATGATTGCATTGTAAAAACGGAATCAAATTTTTGGCTAGGAGAAGATGAAGACTTTGAAGACAACAAAGACGACTATGGCGACAGTAGTGACGAACATTTCGATCCGGAAACTTCTTCACTACCCAAAAATATAAGGCAATTGAGCACGGTCCAAATTCAGGCAGTAGTCATCAAATACTTCGACATGAACTGTGAAAAATGTGAGACTAAATTTTCGGGATTTTATGAGGCGAAAAGCCATTATCAATTTGCTCATAACATTGCAAGAGGATATGTTAAATGTTGTGATTTGAAGATCAGAGAGCATAACGATTATCAAAGTCATGTACTGTGGCACTTGAATCCAAATGTATTTGATTGCTTGATTTGTGATTCATCATTTAAAATTGCGAAAAGCTATCATGCCCATACACACTTACATAAAAATAGTGCATTGAAAAGATTTATCTGCGACATATGCGATGCTAAATTCTCTTTCAAGCAAAAACTTGAACATCATATTATGCAAGTTCATGCGGCGAGGAAAAAGTATTTTTGTAGAGATTGTAAAAACTATTTTCGTACGAAGAACCAATTCGTTGTGCACAATCGGCACGTGCACTCAGGCCTCGATGCACAGATAACACCCGAACGTATCGAAGAGTTTATACACACCAAATTTGATATGGATTGCGAACTGAAGCCATGTGAAAAGGTCTTTGAATCCTTACACGATGCAAAACAACATTATTTAAATGTTCATAATATTTCGAATGGATGGATTAAATGCTGCAATAGCAAATTCTCATTCAATAAGGGAATGATTGAGCATATTAAATGGCATATTAATCCATCGTTATTTCAATGTGTAGAGTGTGGACAATTGTGTAAATGTCGCAACAATCTAAAAAAGCATATGATGGTACACAGAGAAAAAAGACATAACCGTCAAAAACATGTTGAATATGAAGATGAAAACTTATTTGAATGCGTATACTGTCATAAAACTTTTCTGAAAAAGTCCAAAATGAATGAACACGTGAAATTTATTCATGAACAAGATATTCAAAAAATAAAAGAAGCTGATATGTGGTCCCGCTTTTTCGATATGACCTGCGACAAATGCAAAAATGTTTTTGAATCACTTGAAGAAGCTCGTACTCATTACGATCGACTGCATGATGATCAAAATGGTTACATCAAATGCTGTAATCTCCAATTTAATGACATATGTTTGGCCAAGGATCACCTGAAATGGCATTTGAGTCCACATATGTTCAAATGCGATCAATGTGGTGAAAGACTGCCAACGGAAAAAGGTTTACAATCACACATTCGAACTGTTCATTCAAGTCGTTCATTTATCTGCGATTATTGTGGTAAAAGCTTCAGTTTGAAGGCGAAATTGGTAAAACATATGTTGTGTGTACATGTTCATATTAAAATGAAACATCAATGTGGTCTTTGTGAGAGAAAGTTTCAGACTTTTAAAAGGCTGCACACACATTTGGAGATAGCACACCCTGATGACTTAAACAGCATAGTACTTGACAGCAAAAATATTCCTCTTATGGATTTTAATAACGAGCGAATGAAAGCGACGATGCAAGAACTTGTCGATCGAACATGTGACATTTGTCATTTAAAATTGGACACTCTGGCCATAGCGAAACGACATTATTTAACCGAACATAAACAACCAAACGGATACGTTAAATGTTGTGAATTTAAGCTTAAATGGGAGTCGGCTTTAATCAATCATCTAAATTGGCATATTAATCCAAACATATTCAAATGTCGTTTGTGTTTGAGAATTTTCGATAGTCGTACAGCAATTAAGGCTCACATAAAAAAACATGAAGCACTTCAAAGTAAACGATACACTTGTGACACATGTTCAGATATTTTTCCAAGAATTACGGATTGTAGATCGCATATGGAAACAGTGCATGGTATCACGATACCTAAGCGAAGGTCCGTTCGACGTGACTTGCCCTCGAACTCATTGGCTGATCCAGTAGATGAGAAAAATTTGGATTTTTTAGCTCTCGATATGACATGTGATGTGGATGGTTGTACAACGGTGTTTACATCGCTATCAAATGCACGGATGCATTACTTAAATGTACATACTATTCCCAATGGTTACATTAAATGCTGTGATATAAAACTTAGAACTCAAGTCGATGTCAAGGATCATATTACCTGGCACAAAGATCCAGAATGTTTTAAATGCAAAGACTGTACACGCAATCGTACTTATAAAAGTAGTCGAGCACTCTCAAGACATGCGATGGAGATGCATTCGGAAGAATCTTTACTTTCAAAATGTATCATATGCAAAAGAAGATTCAAAGAGAATGCCGAATTGGATGCACATATGTTGTTGCATCAAAAACAACCGAAATTTTCTTGCCCCGAGTCGAAATGCAACAAAAGTTTCTACAAAGAAAGCTATTTGAAAATCCATCGTGAGCGTCATCACCATCCGAACGCTGAAAAGAAAAATTACATCTGTGAAGTGTGTGGAGCAGAAAAGTTTAAAACTTTCGTTCAACTTAAAAGACATTTGAACACCGTACACAAGCAAGGACCACAAAGGCCTAAACAAAAATATCAATGTGACATTTGTTTGAAATTTTATTCATCTCAGGGAAGTTTGTATACGCACAAATTAACTCACAATTCTGAATTGCACAAATGCACCCTTTGTGAAAAGGTTTCCCCGAATGCGGCCGCATTAGTGTCTCACATGAATGTGGTACATGTCGAGAAAAAGCTAAATTGTACCATTTGTGATAAAAAGTTCAAATTGGCCTCATCTTTGAAGGACCACTTCGCCACGCATCTAAATAATAAACAGTGGAAATGTGATTATTGTGACTTGAAATTTTATTGCCGACCGAACATGTATAAACATCGCAAGCAAATCCATCGAATAGAATGGGAAGCAGACAAAGCTAAGAAAGAGTCTGAAAGAAATAAATTGTGA
- Protein Sequence
- METTTGEICCRLCFCSNGNFLNIFNDVPSVFDIAELLKKYFQDEVHLSDPLPNIICSDCWHKTESFHEFHEKVLSERDKYLSSHLYEMVIKMEPGSMLVAEASDGQYDDFDVNMCVETITVKSMSVDDQDEAYDGNTRIADNKSIIDVKTNQNDLYFWSEKEEIKEENVQNHCSLRLKSKNHIKLHLKPDIFEKNILSHARTVNPSRSYICDICQRSYKEMRNLQSHIYRIHQTCASFICDICQKSFKTKVEMKSHILAVHVHAKTNERCGLCEEKFKTFKQLNTHLEANHPEDLNSIESDVKNISVLDRNNERLKEALQTFVDQTCDICHVKLDSLAVARIHYIVEHKKQLGYFKCCKSKHYCETNLIDHLNWHVNPKIFTCRLCRNKMFGSRRILMAHANEHKALQCKKFTCRTCSDIFPRIEDYRFHMETKHGVTIPKQKCFRHESASNSLADPVDDEIRNSLFFDMICDVDGCTTVFTSLSNARTHYLNVHTIPNGYIKCCDMKLKTQVDVKDHIAWHKDPECFKCTDCTRHHTYKSSRALSRHAMELHSKISLVHKCIICQKRFKEKAELDAHILLHQNKPKFHCPEPNCDKSFFKEGYLKFHRERHHHPTTKKKNYICEVCGAEKFKTFVQLKRHLNTVHKQGPQRPKQKHQCDICLKFYSSQGSLYTHKLTHNSEIHKCTLCEKVSPNAAALVCHMNAVHVEKKLKCTLCDKTFKLAPALKVYLSDPLPNIICSDCWRKTESFHEFHEKVLSEREKYLNSHFDHVGVKMEPESFLVAEVTEDQFDEFDVNICIEPITLKQIHVDNNQDKVHDEYEPSGLGYSLKEVDLSLAIDDDGSKLNDCIVKTESNFWLGEDEDFEDNKDDYGDSSDEHFDPETSSLPKNIRQLSTVQIQAVVIKYFDMNCEKCETKFSGFYEAKSHYQFAHNIARGYVKCCDLKIREHNDYQSHVLWHLNPNVFDCLICDSSFKIAKSYHAHTHLHKNSALKRFICDICDAKFSFKQKLEHHIMQVHAARKKYFCRDCKNYFRTKNQFVVHNRHVHSGLDAQITPERIEEFIHTKFDMDCELKPCEKVFESLHDAKQHYLNVHNISNGWIKCCNSKFSFNKGMIEHIKWHINPSLFQCVECGQLCKCRNNLKKHMMVHREKRHNRQKHVEYEDENLFECVYCHKTFLKKSKMNEHVKFIHEQDIQKIKEADMWSRFFDMTCDKCKNVFESLEEARTHYDRLHDDQNGYIKCCNLQFNDICLAKDHLKWHLSPHMFKCDQCGERLPTEKGLQSHIRTVHSSRSFICDYCGKSFSLKAKLVKHMLCVHVHIKMKHQCGLCERKFQTFKRLHTHLEIAHPDDLNSIVLDSKNIPLMDFNNERMKATMQELVDRTCDICHLKLDTLAIAKRHYLTEHKQPNGYVKCCEFKLKWESALINHLNWHINPNIFKCRLCLRIFDSRTAIKAHIKKHEALQSKRYTCDTCSDIFPRITDCRSHMETVHGITIPKRRSVRRDLPSNSLADPVDEKNLDFLALDMTCDVDGCTTVFTSLSNARMHYLNVHTIPNGYIKCCDIKLRTQVDVKDHITWHKDPECFKCKDCTRNRTYKSSRALSRHAMEMHSEESLLSKCIICKRRFKENAELDAHMLLHQKQPKFSCPESKCNKSFYKESYLKIHRERHHHPNAEKKNYICEVCGAEKFKTFVQLKRHLNTVHKQGPQRPKQKYQCDICLKFYSSQGSLYTHKLTHNSELHKCTLCEKVSPNAAALVSHMNVVHVEKKLNCTICDKKFKLASSLKDHFATHLNNKQWKCDYCDLKFYCRPNMYKHRKQIHRIEWEADKAKKESERNKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -