Mdes022054.1
Basic Information
- Insect
- Mayetiola destructor
- Gene Symbol
- retn_1
- Assembly
- None
- Location
- GL501518.1:1512014-1525970[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-21 3.7e-18 66.0 0.0 13 89 1 75 1 75 0.96 2 2 0.61 2e+03 -0.4 0.0 39 52 136 149 134 179 0.65
Sequence Information
- Coding Sequence
- ATGCAAAAGCGAGGCACGCCAATCAATCGATTACCGATAATGGCCAAATCAGTTTTGGATTTGTATGAATTGTATAATTTGGTGATAGCCCGCGGTGGCTTGGTTGATGTCATCAATAAGAAATTATGGCAAGAAATTATAAAAGGCTTACATTTACCGTCGAGCATTACAAGCGCAGCATTTACACTCCGAACACAATACATGAAATATTTATATCCATATGAATGCGAAAAGAAAAGCTTAAGCACTCCAACTGAATTACAAGCTGCGATCGATGGGAATCGTAGAGAAGGGCGCCGCTCCAGCTATGGGCAATTTGATTCGCAAATGCAAGGCCAACTGCAGCAATTGCAAGTCCAACGTTCACCAATATCGAGTGGCCTACAACAAATATCACCATTATCATTGGTCCATCAACATGGTGGATCACAAAATGCGCACCATAATTTGTTGGCCAATTCACAAATTGGCTCAGTTGGCAATTTGATGACACATGAGTTAGAACAACGTATGTTCAATTATTTTAAAATGATACAACAAACTAAAGATGCTCAACGCCCACAAAGTCCTGATTGCATTCGTCCCGATACAGTAAAAATGAATCCAATTGAACAAATGAATGCATTAGAAATGTCACGGGTTGCATTTTGGTCAATGTATAACAACAACACAAGCCCACCAATCTCAAATAACACAACTAGCCCACCAACAATTGAACCTCAACGTGAGGCATTGAATTTAACCGATTCACCAGTACGCCCAATCAAACGTGAACGTGATCCTGTTAATGAATTTGGATACACATTGCCAACATCAAAAAAACCCACACATCAATCACGAAATCATTACAATCATGAGCATCGTCGCCATTCGTTGTCATCGCCATCGTCAGTTGGACGTCATCATTCAGTTGAACGTGAAACAAATCATCATGATCATCGCAATGGTTTATTGGACTATCATGATAATCCAAACAAATCAATTTCACCAGCATCACATCATCGTAATGGTACAAATAATGGTAGTCACAATGGTAGCAGAGATCTCTTAAATGCATGCAGCCCAATTGCAATGCTATCGGGCATGCAATTCAAATTGTTCAGCAGAGGTTCAGAAAATGGTGAACCACAATTGGGCGTTTCAATGGAATTAAATGGTGTGCAATATGAAGGTGTTTTATTTGCAAATCGTGTAAATACAACACAATCGATAAGTCCGTCAACGTCATCACCACCGTGTACGCCGAACAAAGTGCCAGTTACACCAAGCGGTAGCAATGCAAGTCAAATGGTCGAAGATCGTAATCGGGTTGTTAATACTGTTTCGCGTCCATTGGTCTCATCTTAG
- Protein Sequence
- MQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKSLSTPTELQAAIDGNRREGRRSSYGQFDSQMQGQLQQLQVQRSPISSGLQQISPLSLVHQHGGSQNAHHNLLANSQIGSVGNLMTHELEQRMFNYFKMIQQTKDAQRPQSPDCIRPDTVKMNPIEQMNALEMSRVAFWSMYNNNTSPPISNNTTSPPTIEPQREALNLTDSPVRPIKRERDPVNEFGYTLPTSKKPTHQSRNHYNHEHRRHSLSSPSSVGRHHSVERETNHHDHRNGLLDYHDNPNKSISPASHHRNGTNNGSHNGSRDLLNACSPIAMLSGMQFKLFSRGSENGEPQLGVSMELNGVQYEGVLFANRVNTTQSISPSTSSPPCTPNKVPVTPSGSNASQMVEDRNRVVNTVSRPLVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -