Basic Information

Gene Symbol
Arid2
Assembly
None
Location
GL501481.1:176842-185386[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.5e-23 5e-20 72.0 0.0 2 89 56 141 55 141 0.95
2 3 3.1 1e+04 -2.7 0.0 15 46 1294 1324 1286 1328 0.74
3 3 1.4 4.4e+03 -1.5 0.4 8 27 1415 1434 1413 1437 0.85

Sequence Information

Coding Sequence
ATGACGACGACCGATTCGCTATCTGGCATTCCGTCGGCTAGTTCAATAAACGAAGATTCGGCAAGTAATGCTTCGAAAACCGGCTCAATAAAAAAACAACATCATATACAGCATTTTCAAGCACAAACGACACCAAATCGAGCAAATTATGTTGACGAAAGAGATAAAGCCAGTTTTTACAAGGATTTATATCACTTCCATGAAATTAAAGGAACTCCCATTCCTCGACCGCCCCGTGTAAATGGTCGTGATATTGATCTACATAAGTTTTATTCACTAGTTTGCAGTAAAGGTGGTTGGGCCAAGATAAATTATCGGAATGAATGGGAGGATCTGGTACCTGAATTTGATTTGCCGAGCAAATGTGTTAATGCATCTGTGGCGCTGAAACAAATATATATGCGATTTTTGGACAGATATGAAAAAATTCATTTTCTCGGTGAAGACAATGATCGCATAGCCGAAGAAAACGACGATGATACTCGTCATAAAAAATGGAATAATAAGCATTTCAATGAAATTCCATTGAAATACAACTACCAGCAACATAATGTGGCAGATAGCATGCGTGCCACACTCAAGCTGTCAACAAACCTGTACAAATCATCGGAATATGAGCGATTGCTCATGTCCTTAATGTCTCCATTGCCAAATGAACAAGATTTCGCTATTAATGTTTGCACTTTGATGTCTAATGAAAGTAGGCATACGTTAAAAATTGAAAGATGTCCAAAATTGATAGATGCATTATTAGCGCATTCTGGTGTTTATTCACATCATTCAATGCGTGAGCTTTTTTTCGAGTATTATTCAAATGTTCGAAAACACTCATTGCAAACATTTTGGAAAGATTGTTTACACGCAAAAGCAGACATACTTGAATTATCATATGAAGATTTTTTCGGCACTGACATACCCGGCAGACCTCCAGTTCGACTTAGAAACGATTACAATGAAATATTTGAAGATGGCCTAAATGTTAGATCTAACGAAATCAATGAAGATTCATCGATCGATTTTCTCAATTTAAAACGTGGATTGGGAACACATGATTATATAGGCCAACGTGTGCATCAAATTACGACCATTTGTCGAAATCTTTCATTCTTTGAAGAAAATATACCGATTCTTGTAAAAAATCGAACGTTCATACGATTTTTGGTTATGTGCGCTAATATTCAATGGGGAAACCTTCATCAAATGGGACTTGATACTTTAGGAAATATTGCGATTGAATTAGAATTATGCGAACCAAATCAAGATAGTTTGACGAAATGTCTACTAATTACTATTACTGAAGGATTAGAGAGTTTGGATCGTGGTGTCATCATAAGTTGTTTGGAAATATTGTACAAATTGTGTCAGAATGGCAACAATGAAGATCATTTGCACAAATTTTTGGAAAAGCGCGCTTATCATCAGATTTGCATGTATCTGTCATTGAATGACATTATGTTATTATTGTATACATTAGAATGTTTATTTGCCTTATCATCGATGGGTGAGAAAGCATGCTTTGCTATAGCACAAGTGAATGGTGTTATTGATACATTGGTCTCGTTAGTATCGGTTGAGGCTCAAAGCTATGGTCCAGATGGCTGCATTTTGATGCGTGTTGTTGAAACAATACCAACACATTTGGGAGCGCAACATCAGAATTTTCATCCACAAACGAATACATTAACTCAACTTCAAACACAACCAGTAATACAACAGTCAACTTTACCACCTGTAGTTGTACCAGATGTTATTGCAAATCCAACAATAGATTCGCAATCAATATCACAATTGAATTCACCATTAGTATCTTCGCCCAACGTCATTCAGTCAGCTCCAACCGCATTGATTCAGTCACCGAAGCCACTGATCCAACCCAAAATCGAAAATGATATCAAGCCAAATATTATTATCAATACATCATCATCTACAAACCCAACAACGATTTCTTCAAGTCCGATCGTGACAAATGTTCAGCCGATAACAACATCTGTATCATTATTCAATAGTTCAAATGTTGTTTTTTCTGAGCAGCAGACGACAACAATCCACACATCTTCAGGCCATAATCAAAATTCGAATAAATTGGCTCAAGATCAAGAGAATGAGCAATTTGCATTGGCTTGGTTGCGTGCAACATTCGAACCAGTTAGCACGCTCACGTCAAGAATAGAGCAACAGGATTTATATAAAATGTATCTAACAGCATGCTCAAAGATTGGTCGAACTGGCGTTGTATCACAGTATCATTTTCCCCGATGTGTTCGAAATGTTTTCAACGCTTCAGTCGGTCCAAATCTAATAAAAATAAAACAAAATTCTATGGAAATATCGTCGTATTTTTATGAAGGCATTCGGATCAGGGCTCAACCTCTAGCAGTTGTACATAAAGGCACGATTTTGCAGGCAGCCGTAACAACAACAATTAAAACACCGGATGGAAACAATGGAAAAAAGGAATCAATCACAAGAAATACAATAATTGTTCCGGTTGATACGAAGAAAAATAATGGAAGCCAATCGACGCTACAACAAGCTGCGCCAATTCTGCAACATGTTCTGACTGGCAATCAAACGGGAGAAAATATCCATATAATTCCTAATAGAACTAACATTCAAACTTCAACAATGAATTCATCACATGTACAACAAACTGTTCAAAACACATGCATCTATTCGTCTTCCATCAAACGGCCGATGAACCCATTGTCAAATCCATCGACTTCTGTTTCAACAACGATTCCCTCAAGTGTATCATCTCCATCGAATACATCATCATCATTAATAAAAGCAATTCTTGCAAACAAGGTAACTGCTGATGGGCAACCAATAACAACGAATATAATTGCATCTGTAAACTCAAGTATTACTACTGCTACTAGCAATATGAATGTGCATCAGGTTGCACAAAGACAGCACCTTCAGAAACAGCGAGAGGCTCAACTTGCGGCCGCATCAGCAGTGAATAGTTCTATGAGTGTTTCCAATGTAGGGCGCAGTATAGACTCCAAAACCGCAATAGCTATAAAAAATGCTTTACAACCGAATGTCAAAGTGCCAATCACAGGAAATGCAATGATTTCATCGTCATTAATCGAAAAGAAAGCCGAGTCAATGCTCGAAACATTCAAACTAAACTGGGACACAGTTCCACCATTGGCTCCACTTAGCAGCGGTAGCAATATCATTCGTCAAGCAAACAATTTAGCATCAGCAAGTCCAACAAAAACCGATGATGATTCCAATTCAACCAGCCAATCGATATATCAAGATGAATCGGAATTTGCTGGATTTGAATTGTTACCGGTCTTATTAGATCGAAAATTGTCTGATCCACCATTTCATATTTCAGGCGATTTGAACAATAAGCGTAAAATCGATATCAGCATAATGAATCAAAATAACGACGAACCATTAACAAAACGATTGAATCAAATGGATTACACCGATGAAACTGCTGTCAATAATGATAAAGCAAAAACCTCTTCAAGTGCAGCAAATTTGTATGCAAAATTGGCAGCCTCATTACTTGAAGATGAAGATATGGAAACATTAACAACACAATCATCAACTGTTACTGGTTCTATGTCAGAACCACCAAAACCAGTTATTACTGTACCTGTTCAGCGGCAAATTATCGTTTCTCCAAATAATCCACCGCAAATGATAATTTCACCTACACAATCAAATTCTCAGATCGGCCAGGCGACAGCCACAATCAAAACTGAAGGTGGATTTCAGACAGTGCCTGTTATACTACAGCATAGCAGTTCAAATCAAATTGGCAATATCCAAATTCAAAAACAAATTTCCGGCTTGGGACAACAAATTATTCAGCCTGTTATTCAGCAACCACAAACTCAGTATATGCTTGCTACCAATCAACAAGGACAAACATATTTAGTAGCTCAACCACAATCGTCACAAGTTAATCAAATTTTATTGACTCAAACTTCGCAGCAACAAGGTGGTGCTCCAACGAAAACGATTATCATTTTGCAACAGCAAAATCCAGGAACAACAAACACAGCAGGTACACCACAAAAGGTAATCATGACTACACAACAAGGTCAACAAATGATAGTAACACAAGTACCGCGGCCCATACCACATCATGTAATCGTTAGTCAACAATCAATCGCAACATCAACGAATGTTATCCAATCAAATCCTCAAATTTCATCAAATACAATCATCAGCCATGTTAACACTGGAACCGTTAACTCAATTTCTCAATCACAAATTCAAATGCAACAAATGCATCAACAACAACAAATCCCAGTGCGATCCCAGCCACAAATACACCAGTCATCAAGTTCATCGATAGCAACAACAACACCAACTGCAAGCGTTATTACTAGTAATGATAAGAAAAAAGTGTTCATCACTGGTAGCGGAAACATTGAAGTTACACAAGTTTCACAGCCAATTTCGCAAGCTCAGAATATTATACCACCAAATATTAGTCAACAAGTGACACAACAAATAACAGTTACAACCCAATCCATGCCTAAGCCGATGACAACGAATATGCAACAACCTTCGATTTCTCAGCCAATGAAATCTAATAAACCAACAATGCCCGTATCAGCACCATCACCTGTATCTACAGTAGCCAATGTAATCAAACCCGAGGATGATCCCGAATTCAATTGGCTATATGTTTGTGATTGGCGTGGCTGTCAAAGAAGAAAGTTTCGTTCGGCAAATGAAGTGTACTTACATGCCTGCGCTGAACATTGTCCAGATAATATCGATCCAAATGCAGACATATATTGTCAATGGGGTCCTGGTCCAAACTTATGCGACAATCTACCACGAAAACGTTTTTCATTGATGACACATATTAATGATCGTCATATAACCCTCGATTCTTTTAAGGCAGCTGTACAGCGACGTATTGCCGCTGGTCTACAAACTTCAGTCACACAAGCAGTAACCATAATTAAGAAGCCTATAGCCACTACAGCTGATGCAATTGGTGCCGCATCACCGACGTTATCAACGTCATCAACCAGCTCAACAGCGGGTAGTAGTGCGGCAATTCAAGCAATTAAACGCCATACAATGGATTTGGTGGGCCAAAAAGAGCTAAAGGATGAGAACGAGGGACCAGTTACGAAAAGTATTCGGCTTACAGCCTCTTTGATATTACGGAACCTTGTCAATTATACGTCATCAGCGAAACGATGCTTACGATTCTATGAGCCACATTTGTCTGGTATCGCATTAAGTAATGTTGAATCGAGTAGAACCATTGCACAGGTTCTTTATGAAATGAACGAAACTCGGCCGTATTGA
Protein Sequence
MTTTDSLSGIPSASSINEDSASNASKTGSIKKQHHIQHFQAQTTPNRANYVDERDKASFYKDLYHFHEIKGTPIPRPPRVNGRDIDLHKFYSLVCSKGGWAKINYRNEWEDLVPEFDLPSKCVNASVALKQIYMRFLDRYEKIHFLGEDNDRIAEENDDDTRHKKWNNKHFNEIPLKYNYQQHNVADSMRATLKLSTNLYKSSEYERLLMSLMSPLPNEQDFAINVCTLMSNESRHTLKIERCPKLIDALLAHSGVYSHHSMRELFFEYYSNVRKHSLQTFWKDCLHAKADILELSYEDFFGTDIPGRPPVRLRNDYNEIFEDGLNVRSNEINEDSSIDFLNLKRGLGTHDYIGQRVHQITTICRNLSFFEENIPILVKNRTFIRFLVMCANIQWGNLHQMGLDTLGNIAIELELCEPNQDSLTKCLLITITEGLESLDRGVIISCLEILYKLCQNGNNEDHLHKFLEKRAYHQICMYLSLNDIMLLLYTLECLFALSSMGEKACFAIAQVNGVIDTLVSLVSVEAQSYGPDGCILMRVVETIPTHLGAQHQNFHPQTNTLTQLQTQPVIQQSTLPPVVVPDVIANPTIDSQSISQLNSPLVSSPNVIQSAPTALIQSPKPLIQPKIENDIKPNIIINTSSSTNPTTISSSPIVTNVQPITTSVSLFNSSNVVFSEQQTTTIHTSSGHNQNSNKLAQDQENEQFALAWLRATFEPVSTLTSRIEQQDLYKMYLTACSKIGRTGVVSQYHFPRCVRNVFNASVGPNLIKIKQNSMEISSYFYEGIRIRAQPLAVVHKGTILQAAVTTTIKTPDGNNGKKESITRNTIIVPVDTKKNNGSQSTLQQAAPILQHVLTGNQTGENIHIIPNRTNIQTSTMNSSHVQQTVQNTCIYSSSIKRPMNPLSNPSTSVSTTIPSSVSSPSNTSSSLIKAILANKVTADGQPITTNIIASVNSSITTATSNMNVHQVAQRQHLQKQREAQLAAASAVNSSMSVSNVGRSIDSKTAIAIKNALQPNVKVPITGNAMISSSLIEKKAESMLETFKLNWDTVPPLAPLSSGSNIIRQANNLASASPTKTDDDSNSTSQSIYQDESEFAGFELLPVLLDRKLSDPPFHISGDLNNKRKIDISIMNQNNDEPLTKRLNQMDYTDETAVNNDKAKTSSSAANLYAKLAASLLEDEDMETLTTQSSTVTGSMSEPPKPVITVPVQRQIIVSPNNPPQMIISPTQSNSQIGQATATIKTEGGFQTVPVILQHSSSNQIGNIQIQKQISGLGQQIIQPVIQQPQTQYMLATNQQGQTYLVAQPQSSQVNQILLTQTSQQQGGAPTKTIIILQQQNPGTTNTAGTPQKVIMTTQQGQQMIVTQVPRPIPHHVIVSQQSIATSTNVIQSNPQISSNTIISHVNTGTVNSISQSQIQMQQMHQQQQIPVRSQPQIHQSSSSSIATTTPTASVITSNDKKKVFITGSGNIEVTQVSQPISQAQNIIPPNISQQVTQQITVTTQSMPKPMTTNMQQPSISQPMKSNKPTMPVSAPSPVSTVANVIKPEDDPEFNWLYVCDWRGCQRRKFRSANEVYLHACAEHCPDNIDPNADIYCQWGPGPNLCDNLPRKRFSLMTHINDRHITLDSFKAAVQRRIAAGLQTSVTQAVTIIKKPIATTADAIGAASPTLSTSSTSSTAGSSAAIQAIKRHTMDLVGQKELKDENEGPVTKSIRLTASLILRNLVNYTSSAKRCLRFYEPHLSGIALSNVESSRTIAQVLYEMNETRPY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-