Mbor006119.1
Basic Information
- Insect
- Marronus borbonicus
- Gene Symbol
- gata1-a
- Assembly
- GCA_902655005.1
- Location
- LR737380.1:14642431-14662264[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.8 8.8e+03 -3.5 0.1 7 14 248 255 248 258 0.82 2 3 1e-16 3.2e-13 49.1 3.4 1 35 304 337 304 338 0.97 3 3 2.5e-17 8e-14 51.0 8.4 1 34 360 392 360 394 0.97
Sequence Information
- Coding Sequence
- ATGCCCACGATGGAACAGAAAGACAACGTATCGCCTCTCGAGCAAAACGAAGTCAAGCAGGAAGAAACAATCATCGATAATTCGCAGGAGAATCACAATACCGGAGTAAGTGTAATTAGATCGCGGCAAATTATAACAACGGCTGGGACCATCGTCGAGGAGCCGAAAATCGAAGTGGTGTCGGAGGAAGTGGTCAAATCCTCGACGCCGGTGAACGGGAGTCCAGAAAGTAGCTTAAACGCCACATCCCAAGAAGAACAACAATATGAGGAACAGATTCAACGAGAAGACGAACAGACGTACGAACAATACGCAGAAGAGATCACAGGACAGGCGTACCAAAATGCTGAAGGCCAGGTGATCTTCACCACGGCATCTGTTGACTTGAATCAAGTTCCTCATATACAGATAACCGCACCCCAGTTTGAAAATCAGGAGGATATCAAGAGCGCTGAATATACCAATTTGGAAAGCGTTCCCTCTTCTCAGTTTAATCATCAGGTACCGGCTGATGCGACgcaatatttacaacaaacgCAATATCAACAGCAGTTCTCCACATATACGAAAGGTAGTCGGAGTATAGGAGAAAGTCCGCCAAACGAAGTTTTATACAACGATCCGACGTTAGCTTCCACCAGAATGTACCAATCTGTATCGGGAAGTTATGAACTAACGAATTCGCAATCTCCTAACAATCAAGTGACAGTCGTAGGTCCCGATACCTATTACGCAATACCGACAAATTCGGCGCAATGGAACCAATCGAATGCGAATTGTCAATACTTCCCCGCGACAAATACCTTAAACATCCAGGCTGACAGCACCCTTAGCTTCCCGTACCCAGGAACGAGTTGGCAGGAAGACGGCTACGAGACGACGACGATGTCAGAGGTAGATATCAAAGAATGTGTAAATTGTGCAGCCAGTGTCACTCCATTATGGAGAAGGGACGGCACGGGACATTACCTCTGTAACGCTTGCGgtttgtacaataaaattaatggcaCTAACAGACCACCGATTCGGGCCAACAAGAAACCTCCAACAACTGGAAACCGACGAAGTGGAGTGCAGTGTGCTAACTGCAATACCAACACTACGACATTATGGCGTCGAAATAACCAAGGAGAACCAGTGTGCAATGCTTGTGGGCTCTATTACAAGCTACACAATATGAATCGCCCTCTTAGCATGAAAAAAGAAGGCATTCAAACGAGGAAACGTAAGCCAAAGGGCAAACCATACTCAACCATTCCTAATGGTCATGCGATGCCCCAGCGAAATAATGCAATGTTTATGTCGCACCCAGCGGACTTGAATGATCAATACCAGTTACCCAACCAGTACATCGTCACTACTCAACCGGCACAATTAAGACTGCCCAGTGCTTCCATGATTAATCGCCAGACAATTAACAAtGTACCTGCATTAGAATCGGTCATCGCGCGAAGCGTTGATGAACAAGCTAGCGTTATTACATCGACTTCTGCAGCTACTCGTCAAGGATTTCCCCAACCGGCTGAAAAGAATCAAGGACACGAACAAGGAGACTGTTAA
- Protein Sequence
- MPTMEQKDNVSPLEQNEVKQEETIIDNSQENHNTGVSVIRSRQIITTAGTIVEEPKIEVVSEEVVKSSTPVNGSPESSLNATSQEEQQYEEQIQREDEQTYEQYAEEITGQAYQNAEGQVIFTTASVDLNQVPHIQITAPQFENQEDIKSAEYTNLESVPSSQFNHQVPADATQYLQQTQYQQQFSTYTKGSRSIGESPPNEVLYNDPTLASTRMYQSVSGSYELTNSQSPNNQVTVVGPDTYYAIPTNSAQWNQSNANCQYFPATNTLNIQADSTLSFPYPGTSWQEDGYETTTMSEVDIKECVNCAASVTPLWRRDGTGHYLCNACGLYNKINGTNRPPIRANKKPPTTGNRRSGVQCANCNTNTTTLWRRNNQGEPVCNACGLYYKLHNMNRPLSMKKEGIQTRKRKPKGKPYSTIPNGHAMPQRNNAMFMSHPADLNDQYQLPNQYIVTTQPAQLRLPSASMINRQTINNVPALESVIARSVDEQASVITSTSAATRQGFPQPAEKNQGHEQGDC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01121245;
- 90% Identity
- iTF_01121245;
- 80% Identity
- -