Basic Information

Insect: Marronus borbonicus
Gene Symbol: THAP1
Assembly: GCA_902655005.1
Location: LR737382.1:26540622-26542880[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.5 41 5.0 1.1 2 19 209 226 209 230 0.90

2 16 3 2.5e+02 2.5 1.1 1 23 236 258 236 258 0.92

3 16 0.0059 0.49 11.0 1.5 2 23 266 289 265 289 0.90

4 16 6.8e-06 0.00056 20.3 1.5 1 23 293 315 293 315 0.98

5 16 2e-05 0.0016 18.8 2.2 1 23 320 342 320 342 0.98

6 16 0.22 18 6.1 1.9 1 23 351 373 351 373 0.96

7 16 0.08 6.6 7.5 1.4 1 23 377 399 377 399 0.97

8 16 0.023 1.9 9.2 2.7 1 23 405 427 405 427 0.98

9 16 0.00019 0.015 15.8 4.6 1 23 433 455 433 455 0.98

10 16 0.00012 0.0098 16.4 2.5 1 23 460 482 460 482 0.98

11 16 0.0044 0.36 11.4 3.5 1 21 488 508 488 512 0.92

12 16 0.00028 0.023 15.2 3.8 1 23 516 538 516 538 0.97

13 16 0.29 24 5.7 1.3 1 23 544 567 544 567 0.92

14 16 0.36 29 5.4 0.7 2 23 574 595 573 595 0.94

15 16 1.1e-05 0.00094 19.6 0.6 1 23 601 623 601 623 0.98

16 16 1.2e-05 0.00099 19.5 3.7 1 23 629 651 629 651 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.5	41	5.0	1.1	2	19	209	226	209	230	0.90
2	16	3	2.5e+02	2.5	1.1	1	23	236	258	236	258	0.92
3	16	0.0059	0.49	11.0	1.5	2	23	266	289	265	289	0.90
4	16	6.8e-06	0.00056	20.3	1.5	1	23	293	315	293	315	0.98
5	16	2e-05	0.0016	18.8	2.2	1	23	320	342	320	342	0.98
6	16	0.22	18	6.1	1.9	1	23	351	373	351	373	0.96
7	16	0.08	6.6	7.5	1.4	1	23	377	399	377	399	0.97
8	16	0.023	1.9	9.2	2.7	1	23	405	427	405	427	0.98
9	16	0.00019	0.015	15.8	4.6	1	23	433	455	433	455	0.98
10	16	0.00012	0.0098	16.4	2.5	1	23	460	482	460	482	0.98
11	16	0.0044	0.36	11.4	3.5	1	21	488	508	488	512	0.92
12	16	0.00028	0.023	15.2	3.8	1	23	516	538	516	538	0.97
13	16	0.29	24	5.7	1.3	1	23	544	567	544	567	0.92
14	16	0.36	29	5.4	0.7	2	23	574	595	573	595	0.94
15	16	1.1e-05	0.00094	19.6	0.6	1	23	601	623	601	623	0.98
16	16	1.2e-05	0.00099	19.5	3.7	1	23	629	651	629	651	0.98

Sequence Information

Coding Sequence: ATGGTCAGAACTTGTTGTGCTGATGGTTGTCGCAACAAATGGATCACCGGCGGGCCAATACATTTTCACAGATTTCCATTTAACCAACCTGAATTGGTCGAATTATGGGTGGAAGCACTACACTTAGGAGACTTTCGACCAACTCGCAATTCAATGGTGTGCAGTGAACATTTCGCTGAAGATAGTTACGTGGAATCTAAAGATGATGGGTTAAAAAAGTTCTTGAAGAAGGATGCCGTACCATCGAAGGCTATAATTTCATCTTATAAAGCAAATGAAGCGATATCAAACATCGATATGCATTGCAAGCAAGAAGTAGATCCATCGCTTGCTATTACGCAGtcCGATCACATAGAAACCCACctcatcaaaattaaagaagaaatcataGATGACGATAGCGATATAATGGAACTGCAAATTGATccattatatgtaaaaatagaaaaggaaaaagagcAACAAGATGAAGAAACCTTCGAATTCATCGCTTTAGACACAATGGCGGATACATCGACATCTTCCAAGCCGACGTCTCGAAGACAACGAGAAAAAACCCCTACACGATCtatagaaaaatttgaagaaatcacTGTAAAAGAAGAGATTGATTTCACTTCAGCGTATTGTGAAATgtgcaatataaaatttgacGATGTGAAACAATTCGAAGAACATTGCATTTTGCACAATAAGCGGAGCACGTATTTTTGTTCGGTGTGTTTGgatatatttaaaacgaaaaaaggtATTTTGAGGCATTTCGGGAAACACcgtgaaattcaaattttaagtaaatgtaaTCTATGTAATTATACGTTTGGTTCGAAAGAAGATCTAGATATGCATAGCAAAACTTTCAAgcatattaaacaattttcatgtGATGAATGTGGGAagcaattctttttaaaaagcaatttaacgATTCATAAACGTCTACACACGAACGAGATTTTCGAATGTGATATTTGCcaacaaaaatttactaggcgtctatttttacaaaatcacaTGATGAAacatgataataaaaaaaataaaaagacttACAAGTGCTCAAAGTGCGAATTTTTCACCGAAAATCGAACAGAAATGACTGAACATAATGCCAAGCATGACCCAGTGTTTAAATGCCGTAAATGTGATTTTCAAGCGAAGACTTACGCCGAAGTTAGAAAACATCGTGATATCCACTTAGCGGATGTAACATTTAAATGCGAATTATGTCCGTATGAAACTCACAAGAAGTATCGGTTAACAGAACACCAAGCTACGCACTACGATGTGAAACCCCACGAATGTCATATATGTAAGATAAGATTAAGTACACGGAATAGTTTAACTAGACATATAAAATCACATACCGAAGGAAATTTTCAATGTGATTTATGTAAAAAGtcttttaatttgctaaaatatctCAAGGATCATGTGAAACGTCATGTGAATAAGGACCTGTTCGAGTGCGAGATGTGCGATTTCAAATGCTACAAGAAATACGATCTAAATAAACACCAAATTGAACAGAATCACAAGAAGATGCATAAATGTGAGATATGTGATAAGGAGTTTACAGCGAAACACTCATACAAACTCCATTTAAGCGTACATGCAGGAAATGAGAGATTCGAATGCATCGTATGTAGAGAAAAGTTCGTTTTGACTCGGCATTTATTAcagcatataaaattatcacaCCCTGAAGCTGATCCTCTCAAATGCGATGTATGTGATTACACAACTTTTATTCCAACTACGTTCGACAAACATAAAATTAGGCACAAGGAACTGAAACCGTACGTGTGTAATATTTGTAAAGTCGGTTTTAATTATAATCAAAGTTTGAAGAAACATATGGCTTCACATCTCGGCTTAACACCTTACGAATGCACTTTGTGTGATAAGAAATATAGTAAGCACGATACGTTGAAACAGCATATGTTGAGTCATTCTCGTAATGCAGCTGCCGAGAAGTCTGGCTGA
Protein Sequence: MVRTCCADGCRNKWITGGPIHFHRFPFNQPELVELWVEALHLGDFRPTRNSMVCSEHFAEDSYVESKDDGLKKFLKKDAVPSKAIISSYKANEAISNIDMHCKQEVDPSLAITQSDHIETHLIKIKEEIIDDDSDIMELQIDPLYVKIEKEKEQQDEETFEFIALDTMADTSTSSKPTSRRQREKTPTRSIEKFEEITVKEEIDFTSAYCEMCNIKFDDVKQFEEHCILHNKRSTYFCSVCLDIFKTKKGILRHFGKHREIQILSKCNLCNYTFGSKEDLDMHSKTFKHIKQFSCDECGKQFFLKSNLTIHKRLHTNEIFECDICQQKFTRRLFLQNHMMKHDNKKNKKTYKCSKCEFFTENRTEMTEHNAKHDPVFKCRKCDFQAKTYAEVRKHRDIHLADVTFKCELCPYETHKKYRLTEHQATHYDVKPHECHICKIRLSTRNSLTRHIKSHTEGNFQCDLCKKSFNLLKYLKDHVKRHVNKDLFECEMCDFKCYKKYDLNKHQIEQNHKKMHKCEICDKEFTAKHSYKLHLSVHAGNERFECIVCREKFVLTRHLLQHIKLSHPEADPLKCDVCDYTTFIPTTFDKHKIRHKELKPYVCNICKVGFNYNQSLKKHMASHLGLTPYECTLCDKKYSKHDTLKQHMLSHSRNAAAEKSG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01121084;
90% Identity: iTF_01121084;
80% Identity: -