Basic Information

Gene Symbol
pnr
Assembly
GCA_030765055.1
Location
CM060959.1:95411893-95435715[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.4e-18 4.5e-14 54.1 3.2 1 34 132 164 132 166 0.97
2 2 3.6e-19 6.8e-15 56.7 6.2 1 35 186 219 186 220 0.98

Sequence Information

Coding Sequence
ATGTTCCAACCAAACGGGGCAACAGGAGGGTACACAGACCCGGGGACTAACACCGGCGGCTACCTGGGCGTGGGGACGCAACATCCTGTTTATGTGCCATCAAACCGTGCCATGATGCATCACCAGTACACGCCTTCGGGAGATACGGCGGGGACATCCAGCAACTCGCATCACTTCCATGGCGCTCCCGCGCAGACCCCAACGGCTACCTCTTGGCATCAAACGACGACACACGACTCGTACCATCACCCTCAAACGCCTCTCTCTAACCCGTTCTACGCTCAGAACATGATGATGACGGCGGCTTCCTGGAGGGCTTACGACGGCACCACCTTTCAACGGGCATCGCATTATGATAGCTCCATGGACTTTCAGTTCGGAGAAGGGCGAGAATGTGTTAACTGCGGCGCCATCTCCACCCCGCTGTGGCGTAGGGATGGAACTGGCCACTACCTCTGCAATGCCTGCGGTCTGTACCACAAGATGAATGGCATGAACAGGCCTCTGATCAAACCGTCCAAAAGACTGACGGCAACTAGACGTCTAGGGTTGTGCTGTACAAACTGTGGCACACGTACCACAACGTTATGGCGGAGAAACAACGAAGGCGAACCTGTGTGCAACGCTTGTGGACTttacttcaaacttcacggcGTGAATCGACCGCTCGCCATGCGCAAGGACGGCATTCAAACGCGCAAGCGCAAACCCAagaaacaacagcaacagcagcagcaacaacagtcCGCGAATGAAAAGGAACAACCCGATAGTACAGAATCGAAGCAGGCCACCATGCAACAGCTGGAAGGTAGCAGCAAAACGCCGACGTCATCATCGCTGTATTTGGGACACACTTCGCTACTTCCTGCCGTGGTCAAGACCGAGGTAGAAGCTCCCACTAGCTCGACGACCAGCACCGACGGTAGTCGTGGTTACTCCAACTTTGTGTCTAGTTCTggacaccatcatcaccaccaactCAACAATCACCAGATCTTCGGCTTCCCTCCACCTCCGCCGCCACCGCCTCCTGCAGCCGTGACACAGGGGACGGTAGCAGATGTGAGCAGCTACGTCATGGGACACCATCCTgcacatcatcaccatcaccatcatcaccatcatatgACAGCCGCCAAGCTGATGGCTACCACTTGA
Protein Sequence
MFQPNGATGGYTDPGTNTGGYLGVGTQHPVYVPSNRAMMHHQYTPSGDTAGTSSNSHHFHGAPAQTPTATSWHQTTTHDSYHHPQTPLSNPFYAQNMMMTAASWRAYDGTTFQRASHYDSSMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKQQQQQQQQQSANEKEQPDSTESKQATMQQLEGSSKTPTSSSLYLGHTSLLPAVVKTEVEAPTSSTTSTDGSRGYSNFVSSSGHHHHHQLNNHQIFGFPPPPPPPPPAAVTQGTVADVSSYVMGHHPAHHHHHHHHHHMTAAKLMATT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01411151; iTF_00996005;
90% Identity
iTF_01411151;
80% Identity
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