Mrel051171.1
Basic Information
- Insect
- Mantis religiosa
- Gene Symbol
- -
- Assembly
- GCA_030765055.1
- Location
- CM060954.1:62594188-62610991[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 2.4 1.1e+03 2.7 0.2 6 22 287 303 284 306 0.85 2 12 0.32 1.4e+02 5.5 2.0 3 22 471 490 469 493 0.90 3 12 0.037 17 8.4 2.2 3 19 516 532 513 534 0.93 4 12 0.16 73 6.4 0.2 1 23 554 579 554 579 0.81 5 12 0.57 2.5e+02 4.7 0.2 1 22 585 606 585 609 0.89 6 12 0.062 28 7.7 0.9 2 23 625 647 625 647 0.96 7 12 0.00012 0.052 16.3 0.0 2 21 653 672 652 673 0.95 8 12 4.4 2e+03 1.9 0.2 1 17 687 703 687 709 0.81 9 12 0.017 7.8 9.5 0.4 1 23 732 753 732 753 0.97 10 12 7.4e-05 0.033 16.9 4.3 2 23 760 782 759 782 0.95 11 12 0.34 1.5e+02 5.4 1.1 1 23 789 811 789 811 0.96 12 12 5.1 2.3e+03 1.7 0.2 1 12 819 830 819 831 0.84
Sequence Information
- Coding Sequence
- ATGTTGGTGTTAGGTCTGGACAACTACGTGAAGCATCGCAAAGCTGGTTGTGTCAGGAGCGTGGTGGAATCCAAGTCCCATCACGATTCATCAGCCACTGCGACACAGAATGATAAATCCGACACATCATCTACAGAACCCGGACTCCGTGCCGATGATTTCTTCTCCTCGCTTGAGTTACAAAGTAGTTCAAAAAAAGCGGTGACATCCCCTGGATCCTCCCGGAGTCCAGGGATGGTCACACGTCGCAAAGCCTCTGTACTAGCCGGAAGTGCCAACAAACCTGACAGCGGCAATGAGCTTCAAGAGTGCACTGATTCAGCCCCACAGCTGATTGAGGAAAGCATTGTTGTCAAACATGTAGACGAAGAAGAAGATTTTGTATGTGAGGATGAATCAGAATATGAGTACGAGGATGAAGATGGCGATGAGATGTATCCGCCAAGGTCTCACACTGGGGGCAAGTGGAAACCTGGCTCTGGGTTCCTAAATAGAGCACTCTCGCCGTCCTGGCCACGAACAAGTACAACGGCTGCCACGACGCCATCTTCGGTACATCAAGGAGAATCGTGGAGCTTGCTGCTAGAGGACGGGGGCGGTAGGGATGCACCGCCACCTCCAAGTTTTACTGGGGGCAAGTGGAAACCAACAGGGATGCCTAATCATGATTTGCCTACATCTGTTGGAGATCAAGATTCTAGAGTGGCCTCAGCGGACGAGGACGAAGAGCATCAGGAGACCGTGAGACCAGGTATGCATCCACCTCCTCCTGGACACACCAGTGGTAAGTGGGTACCCGCTAGAGGTGGTGGGAGTCTCCGCAAGTCAGGAAGCACAGTCCAGTATTGGTGTGGTCCCTGCAACCGCAGCCTCAGTTCAAGGGTACTGTATGATCGTCACATCCTTTCTGAACTCCACTTCAAGAGAACCTTGCAGGAACGTGAACTGGAGGACCAAGAGCAAGACCAAGGCCAGGCTGTAAAGCGCCGTAACATACGCCGTACAGAAGCTTACGTCAACAGTGAGCTGTGGTCCCGCAGCAAAAGAAGTCGTTTGAGGCGTCTGCAAGGCAAGTTTTCAGAAGATGAAGGCGATGATAATGATGGTTCAGAGTCACGACAGAAGAAACTGATGCATCGCAATGCAGTAAGATGTGAGGTATGCCGTACTCGAGTGTGGCGACACCTGCTGGGTAAGCATTTGGTGTCGCATTATCATCGTCGTAAGGCCCGTCAGTCGGACTGTGACACAACCGAACTTGTCCTCCAGAACATACACAGCATAGTGAGACAGGCTCCCTTACAGTGCGGTCCCTGCAAGTTTTATTGCAACACTCAAGAACATTTTCGGCAACATTGGGAGTCCACAGAACACGCTTCAGTTGATCTGCAGGTATCTGGAAGCTATTGGTGTTCCTTGTGTAAGCATGAGTGTAACACATCGGTGGAGATGCAGACTCACATGGAAAGTGCCATGCATCAGGAACTGGTGTCAATTATAAATGGTTCCGTCCCACTAGTCATCAGGAAGAGGACTTTCATATGCTGCAGTGAATGTGGTGCACGTTTTGTGTACAATCTGCAGTTACGGCGTCATTGCCTTCAGACAGGACATCGTCTGGATGAGAAGAGCACAGCTTCTGATGCGCATCAGTCAAGATTTCCTTGCTCGGAATGCAGTGGCATGTTCGTGTCATCCTCCAAGTTCGGTCTGCAGCGCCACATTATGCTGACTCACCGGGATGGAGGTGCTTATTACTGCAGCAGTTGCTCGCTTAGATTTGGATCAGCTGAAGAAGCAGTGGCTCATCGACAAAGTCAACAGCACAGATACTCCGTGATGACGGCCAAACGACCAGAAGATGTAACCAGAACCTGCCAACACTGTGGTGGCGTCTTCCTCAACGTGCCCAGCCTCAAGCAACATCTTCGCCAACAACACGCGGACTATCTCTCCAAGTGTCCTAACTGTGGGAAAGCGTTTGCACTTCCTCAGGAATTGTCGCGTCATGTCAGAGAAAGAGCTTGTGTGTTTGATGAGATCAAAACGGAGGGGAATCACCGTTGTGGACAATGTCCTTACATCACAGATTCCCGAGCAGAGCTTCTCTTTCACGAGGCGCTACATGGCGAACCGGTCCCTGATTCGGAGATACttaacgatgatgacgacgacgaggaAGCAGTCCCGAGATACAGATGTCCTCTGTGCCCCAGGGCTCTCAAGAAGTACTCTCTACGTCCCCACCTAAGGATGCACACCTTCGAACCAATATGCGAATGCAACGTATGTCTCAGGACTTTCGTACATCGTTCGTCTCTTGTCAAGCATATGCGTCAGATGCATTCTGAGGATGTGGAGAAGTTCAAGTGTACCAGCTGCCCTTTCAGCACACTAAGGAAAGATTCTATGGAACGTCATAACCTTATTCACAACAATCAGCGCCCCAAAACGTACCTCTGTGCCGTCTGTGGAGCTAGCTTCTTCAACAAGTGA
- Protein Sequence
- MLVLGLDNYVKHRKAGCVRSVVESKSHHDSSATATQNDKSDTSSTEPGLRADDFFSSLELQSSSKKAVTSPGSSRSPGMVTRRKASVLAGSANKPDSGNELQECTDSAPQLIEESIVVKHVDEEEDFVCEDESEYEYEDEDGDEMYPPRSHTGGKWKPGSGFLNRALSPSWPRTSTTAATTPSSVHQGESWSLLLEDGGGRDAPPPPSFTGGKWKPTGMPNHDLPTSVGDQDSRVASADEDEEHQETVRPGMHPPPPGHTSGKWVPARGGGSLRKSGSTVQYWCGPCNRSLSSRVLYDRHILSELHFKRTLQERELEDQEQDQGQAVKRRNIRRTEAYVNSELWSRSKRSRLRRLQGKFSEDEGDDNDGSESRQKKLMHRNAVRCEVCRTRVWRHLLGKHLVSHYHRRKARQSDCDTTELVLQNIHSIVRQAPLQCGPCKFYCNTQEHFRQHWESTEHASVDLQVSGSYWCSLCKHECNTSVEMQTHMESAMHQELVSIINGSVPLVIRKRTFICCSECGARFVYNLQLRRHCLQTGHRLDEKSTASDAHQSRFPCSECSGMFVSSSKFGLQRHIMLTHRDGGAYYCSSCSLRFGSAEEAVAHRQSQQHRYSVMTAKRPEDVTRTCQHCGGVFLNVPSLKQHLRQQHADYLSKCPNCGKAFALPQELSRHVRERACVFDEIKTEGNHRCGQCPYITDSRAELLFHEALHGEPVPDSEILNDDDDDEEAVPRYRCPLCPRALKKYSLRPHLRMHTFEPICECNVCLRTFVHRSSLVKHMRQMHSEDVEKFKCTSCPFSTLRKDSMERHNLIHNNQRPKTYLCAVCGASFFNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01411089;
- 90% Identity
- -
- 80% Identity
- -