Mrel082569.1
Basic Information
- Insect
- Mantis religiosa
- Gene Symbol
- -
- Assembly
- GCA_030765055.1
- Location
- JAUKNK010000101.1:2278128-2325253[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 3.4e-05 0.015 18.0 3.3 1 23 195 217 195 217 0.98 2 17 0.22 98 6.0 0.5 1 19 221 239 221 241 0.95 3 17 1.3e-06 0.00057 22.5 1.9 2 23 256 277 256 277 0.97 4 17 0.007 3.1 10.7 2.0 2 22 282 302 281 302 0.94 5 17 8.5e-06 0.0038 19.9 1.1 1 23 310 332 310 332 0.98 6 17 0.81 3.6e+02 4.2 0.1 1 20 336 355 336 357 0.88 7 17 0.068 30 7.6 1.1 2 23 371 392 371 392 0.95 8 17 0.07 31 7.6 1.9 1 19 396 414 396 417 0.82 9 17 0.0013 0.59 13.0 0.5 2 23 422 443 421 443 0.90 10 17 3.2 1.4e+03 2.4 6.2 1 21 448 468 448 469 0.92 11 17 0.0033 1.5 11.8 0.4 2 23 505 526 504 526 0.96 12 17 0.0012 0.51 13.2 3.0 1 23 531 553 531 553 0.97 13 17 0.00094 0.42 13.5 1.7 2 21 559 578 558 580 0.94 14 17 6.2e-06 0.0028 20.3 0.1 1 23 586 608 586 608 0.96 15 17 1.3e-05 0.0059 19.3 2.4 2 23 617 638 616 638 0.95 16 17 4.6e-05 0.021 17.6 2.6 1 23 644 667 644 667 0.97 17 17 0.0013 0.59 13.0 3.0 1 23 672 695 672 695 0.96
Sequence Information
- Coding Sequence
- ATGACAAGTATAGTAATAGCAAATCTAACACCACAGTTCTCTCAAAATGGGGCACAAACTATATTTGTTACCAACACAAATGAAGTGTTTCCAGATGCTCTGTCAGCCGATGGTGAGGTTAATGACAGCCAGAACGAGGCTCTGAATGTCCTTCTGGAACAACTTCAATCTGAGAGTACATTCACCACAGGCAGCTGTGCGTCAAAAGATAACGAGAATCATAGCAGTGATATCCTCACTACCTCATCAAACTTTCACTCTGCTGTTATAGAGAATTGTCAGGATATTGGAAATGACTTATTAACAAAAATACAGTTACAAACAGATGAAGTTCTACATTCAGATAGGGACAAACAAGGTGATAACAGCGAGTTTCTGAACACATTTCAGTCATGTAGTGATGAAGTTGTGTCAAAGAGTAACGAGAAAAGTAACTGTACCAAAGAAAATGGCATCGACACGCAGAATACCTCTCTTCTAAACCTCATATCCTGCCCAGACTTTGGAGAGGAATCTAAAGCATCTGACACAGGTTTTAttactgctgctgatgatgacaAATCGTCAGATATTGGACCTCCATATAACTGCGACATCTGCAATAAGGAATTCCATAAGGCAGATTACCTTTACCGTCATCTGCGCAAGCATACAGGAGAGTTCACTTGTGTCTCTTGTCTGGCTGTTTTTGCACGCAAGGAGAGTCTAGTGAACCATTCCTGCTTCATCGATAATAACAGCCAATCGGAAAACAAGTCATCACGCACTTGCCCCTACTGCCAGAAGGTTTTCCGTATGAAGAAACTGCTCAAAAGGCATATGGCAAAACATACAGGTGAATGGAAGTGCAACAACTGTCAGCGGATATACTCGTCCAGAACAACACTAGCCTCACACAGATGCACCAGCAAGAAGACTACACAGATGTATCGTTGTCAAGTGTGTGGCCGAGAATTCCTGCGGCAAAGTTACCTCAACAAGCACATGTTACTGCATAGGGAACTACATCCTTGTGGAACCTGTGGCAAAAAACTGCCAGCTGGAGAGACTCTTACAGTGCATCAGGATTACTGTTCACAGGAGAAGCTACTGGAGACAGCGAGAGAGGCCACATGTCCCAACTGTAGTACAACATTTGTACATGTGCTGACATACCGACAACATGTTCTCGAGCATACACACCCATTCCTGTGCCAACAGTGTGGTCGAAGGTTCTCCACCAACGAAACCAAAGTACTACACAGCTGCACCAATACAATGCTCCAATGTGATTTGTGTCTCAAGAGCTTCTcgcacatgtctgaacttataCAACACAATGCAGCACATGGTGTCCCCCAGTTCCACTGTTACGAGTGTGGCAACAGCTTTCATCACAGTGAAAGATATATGAATCATGTGTGTAGCACAGAAGATGAGGGTGGTACTAAAAGActacacaaaaagaaaaagaagaagactagTCAGACGACGGAGACAGAAGGGGAGACAAGCAATAAATCTGGAGGACTTGTATGTGATGTGTGTGGGGATGTGTACAAGACAATACACAGTCTTAAAGCTCACAGACAGCTGCACGGCGAGCGCAGGTTTGAGTGCGAAGTCTGTGGCAAGAGGTTTCACAGGAAAGACATACTTCAGGAACACCACACTGTGCACCAGGCACCACAGATCCCATGTCCCgtttgtaacaaaaaactcaAGACCAAGAAGTCTCTGGATGTTCACATGCGATGTCACACTGGGGAGAAGCCCTACAGCTGTGGAGAGTGTGGCAAGGAGTTCTTCCAGAAGGGCAACCTGTTGAAGCATGCAGCAGTACATAACCCCCTCGCCAGAAGATTACTGATGTGTGACCACTGTAACAAAAACTTTACGTCACGTGACTATCTGTCGCAGCACATGTTGGAGCATACACAAGGTCGGATACATCAGTGTGAGCTGTGTGACAAAGGCTTTGTGAAGGAACACATGCTGAAGGCCCATATTAGGCAGTACCATGGTGGACTGACATTTGTCTGTCCATATTGCCACATGTCAGTAAGGTACCGACAGTCTATGCGAAGGCATCTAGAGAAGCGACATTCTGACATGCAACATGAGTGGGATGTGCATGGGTTTCTGGATAAACTAGAGGCAGGTGGCAACACTGAGGTGTCCACATCACTTGTGGCGACATCGCAACAAACCAGTCCAGTTATTAGTAACATGGACATTCTGCAGACTGACACACAAGGGGAAGGTGGAGAGATATTGCTGACAGTGTCGAGGATTCCTTTGGTTGAGGGACAAGAGTCAGAGGAGCAGACAGATATAGGCAGTCAGATGGAACTACAAGTAGAAACAGAAGTACAGGCGGATGAGGTTCCTGTTGGCAATACTTTCATCTTCAATGGGGCTGTTACACAGGAAGATATTGGTAATAGCGAAGGCAACATATTACTCTATGTGCTGGATACAGGAGATGTTGCTATAGACCCAGGTTATTGTGCTGGAGTTGACTGA
- Protein Sequence
- MTSIVIANLTPQFSQNGAQTIFVTNTNEVFPDALSADGEVNDSQNEALNVLLEQLQSESTFTTGSCASKDNENHSSDILTTSSNFHSAVIENCQDIGNDLLTKIQLQTDEVLHSDRDKQGDNSEFLNTFQSCSDEVVSKSNEKSNCTKENGIDTQNTSLLNLISCPDFGEESKASDTGFITAADDDKSSDIGPPYNCDICNKEFHKADYLYRHLRKHTGEFTCVSCLAVFARKESLVNHSCFIDNNSQSENKSSRTCPYCQKVFRMKKLLKRHMAKHTGEWKCNNCQRIYSSRTTLASHRCTSKKTTQMYRCQVCGREFLRQSYLNKHMLLHRELHPCGTCGKKLPAGETLTVHQDYCSQEKLLETAREATCPNCSTTFVHVLTYRQHVLEHTHPFLCQQCGRRFSTNETKVLHSCTNTMLQCDLCLKSFSHMSELIQHNAAHGVPQFHCYECGNSFHHSERYMNHVCSTEDEGGTKRLHKKKKKKTSQTTETEGETSNKSGGLVCDVCGDVYKTIHSLKAHRQLHGERRFECEVCGKRFHRKDILQEHHTVHQAPQIPCPVCNKKLKTKKSLDVHMRCHTGEKPYSCGECGKEFFQKGNLLKHAAVHNPLARRLLMCDHCNKNFTSRDYLSQHMLEHTQGRIHQCELCDKGFVKEHMLKAHIRQYHGGLTFVCPYCHMSVRYRQSMRRHLEKRHSDMQHEWDVHGFLDKLEAGGNTEVSTSLVATSQQTSPVISNMDILQTDTQGEGGEILLTVSRIPLVEGQESEEQTDIGSQMELQVETEVQADEVPVGNTFIFNGAVTQEDIGNSEGNILLYVLDTGDVAIDPGYCAGVD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -