Mrel004826.1
Basic Information
- Insect
- Mantis religiosa
- Gene Symbol
- -
- Assembly
- GCA_030765055.1
- Location
- CM060947.1:207265632-207321522[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 7.7e-06 0.0034 20.0 0.4 1 23 88 110 88 110 0.95 2 14 0.00018 0.078 15.8 1.6 3 23 118 138 117 138 0.99 3 14 5.7e-05 0.025 17.3 0.1 1 23 273 295 273 295 0.98 4 14 0.012 5.6 9.9 0.1 1 23 301 324 301 324 0.95 5 14 5.1e-05 0.023 17.4 4.8 1 23 349 371 349 371 0.98 6 14 1.1e-05 0.0051 19.5 0.1 2 23 386 407 385 407 0.97 7 14 0.062 28 7.7 0.8 1 23 413 436 413 436 0.96 8 14 0.0025 1.1 12.1 1.7 3 20 445 462 444 465 0.93 9 14 0.0001 0.047 16.5 3.5 1 23 471 493 471 493 0.97 10 14 0.0055 2.5 11.0 0.1 2 23 499 520 498 520 0.96 11 14 2e-05 0.0087 18.8 0.5 1 23 529 551 529 551 0.98 12 14 0.0027 1.2 12.0 0.2 3 23 559 579 557 579 0.97 13 14 8.7e-05 0.039 16.7 0.3 1 23 585 607 585 608 0.95 14 14 0.00015 0.069 15.9 0.3 1 23 623 645 623 645 0.97
Sequence Information
- Coding Sequence
- ATGGCCACCATCTGTACACTAGGGCCTACTGTGCTGCTACATCCTCCATATCCACCCGATTTGCCTCCTAGTGACTATGCCCTATTTGACTCAATGAAAGTAGTCATACAGGGTAAGAAGTTCACCATTAATGACAAACTTCATGTAGTTGTCTGTGACCCAACCTTGGATATCAAGGTGACATGTAATCCAGTAGTGGAATCTGACGATGTTGAAATACCTTTACCACAAGATCAGGATGAGTATACAACAATGCGCCCATACCCTTGTGACTTTTGTCCAAGGCGCTTCCGAAAAAAAGCCAACCTTATGAACCATATGGTAGCCCATCAAACTGATCGCCCACATGGCTGCAATCTCTGTGGAGTTCGTTATCGTAGGAAATGTGATCTGGTTAATCACATGAAAATCCATGCATATGTACCAGGGCGTATAATtagcgatgatgacgatgatgatgatgaagttaCCAATGCCAATGAGAATGCTGCCATTAACAATCCACCCAAAGCTAGAAGGAAGAAATCTCAGTCGGCTGCTTCAAAGAAACGCAGGAATCATTCCTCTGCACCAACTTCTGGATATGGAGATTATTTTGAAGACAATAGCTACAATTTAAAGGATAAACGCAGCAATTATAGCAATGTGTCTAGAAAAAAGCCTGGAACAAGTGGTGCAGGCAGTTACAGCTATGTAGAGGAAGATGTGAAGTTACTCTCACAACCACCACCAGTACATTTTACGCCTATGAGTGGCATAATGGAAGCTCAAGAACCATCAGTTCCACGATGGCCTGTCGTTGATGAAACACGGCCATATGTTTGCCAACATTGTGGTGTGGGATTTGCTCGGGAAAAGGCACTAGCTTCACATGCACGCATTCATGCTGGAGATAGTCCCTTTGAATGTGATACATGTGGTGAAATGTTCTGGGATTTAGGTTTGCTGAAGGAACACTCCAAGATAAAGCATGCTGGCAGAGACTTGGATGATCATCAGGGTGATAATTCTGGAACCTATACTGGTGATGATCGTTTTGGAGAATTTCACTGTGAAACCTGTGGTGTTGGCTTCCATAGGCAGGATTTACTGAAACGTCACCGCAGGACTCATGTGAAAGTGGAATCACCTAATTCTGGTGGGGAGTCTTCATGGACTTGCCGGACTTGTGACCAGAGCTTTCCTGATCAGTCTGACCTACTAGCACACTTGGAGACACATTCACGATACCAACCCCACCGTTGCATGATGTGTGGGGAATGCTTTCTTGATGCAGAAGCTGTTGCCATCCATGTACGCAAAAGGCATGCTCGATCCATCCCACCAAATGCTTGCACCCTTTGTGGTAAAATCTGTAAAGACCGACGCTCCCTACAGAAGCATACCTGGGTTCATTCAGCTGAACGCAGCTTTTCATGTGTTAAATGTGGGAAACGTTTCCATAGCCGTGCCAGATTGAAACGTCACATGGTATCACATCGTGATAAGGCTGTATCATGTGAAGAGTGTGGACTAGAATTCCCAGATGGACGGGCTCTTATAAATCACAGACACAGTCATAATAAGGAACCATCTGCTCGACAGTTTTCCTGCCAAGAATGTGGAAAGACATTTGGATCCCGAAGCAGTCAGCAGATACATGCTCGCATACATACCGGGGAGCGTCCATATGGCTGTCGTTTCTGCTGGAAGGCATTTGCTGATGGGGGAACTCTGCGAAAACATGAGCGTATACATACAGGAGAGAAGCCTTATGCCTGTGCTGTATGTCCTCGTGCATTCAATCAAAGGGTGGTGCTGCGAGAGCATATTCGATCACATCATTCTGGACCAGAGCCACGCTCTTCAAGCAGTCATTCTGCTGTTTATGTCTGCAAAGTGTGTGCAGCTGCATTTAGCACTTCAGAGCAGTTGTGTGCTCACTTGATCCAGCACAGTGATGAAAATACAGCCAAACACAGAATGCCAAGGCTTGGTCCTCGTAAGTACAAACGGCGTCGCAAACTGAATTCCCACGAGCTCAACATGTTGTCTGGATCTGCAAGAGGTGGTGAAGAATCATCAGCTGATGAGGAATCGGATGATGGATCTTCTTCTGCCTACAAGcggaagattatcaagaagaagtACAAACAAAAAGGCAAGTCAAATCCTGATGAAAATTATGAAACAGTAGTGAAAACTTTTGAATCTGTTATTGAGAACTTGAATTCGATTGTCAGCCATTCAAAAACGGAACAGCCGGAGAAGGAGAGGACTGAAAAGAAGAAGCACAAAATCAAGCGCAGAGCAACAACTGGAGAGGGAAAACGACCAAGAACCACAGCAATAAGCAACAACAATGGTGCCACAGTACGTCCTGTGGTGGCTCGCAGAATGGATTTGTCTTCTGGCGGTTTTGTGAAGAGCAATCGACCAGCAGGTGAAGGACGCATTCGTCCTAGAACAAAAAATGTTACGGTGAGCACATTGGCTGCCCTTAAGGCTGTATCTTCACCTCTTCCAATTGGTAGTAGTGGGAGGGCTGGGCCAAGAACGAAAAACGTGAATTATCATAATGTGAAGCAATCTAAAATTAGTCCTGCCATCTTCCCAAAAAAGgagctgctGGTGAAGTACCCTCCACGCTGTAATGTGAGATGTACCAGATGCTACAGGCAATTGTCTTGTATTGATACCTTGATCGTCTTTGAAACACTGCAGGATTTGTTCTTTGCATTCTGGTGTCCGAGCAACTCTTGGTCTTCTCGATCAATAGTCTGTGGTGCCACAGTTCCTGTCCCAGGTGACGATAAACAGCATCATAGGTTGGATGACTACATCTAA
- Protein Sequence
- MATICTLGPTVLLHPPYPPDLPPSDYALFDSMKVVIQGKKFTINDKLHVVVCDPTLDIKVTCNPVVESDDVEIPLPQDQDEYTTMRPYPCDFCPRRFRKKANLMNHMVAHQTDRPHGCNLCGVRYRRKCDLVNHMKIHAYVPGRIISDDDDDDDEVTNANENAAINNPPKARRKKSQSAASKKRRNHSSAPTSGYGDYFEDNSYNLKDKRSNYSNVSRKKPGTSGAGSYSYVEEDVKLLSQPPPVHFTPMSGIMEAQEPSVPRWPVVDETRPYVCQHCGVGFAREKALASHARIHAGDSPFECDTCGEMFWDLGLLKEHSKIKHAGRDLDDHQGDNSGTYTGDDRFGEFHCETCGVGFHRQDLLKRHRRTHVKVESPNSGGESSWTCRTCDQSFPDQSDLLAHLETHSRYQPHRCMMCGECFLDAEAVAIHVRKRHARSIPPNACTLCGKICKDRRSLQKHTWVHSAERSFSCVKCGKRFHSRARLKRHMVSHRDKAVSCEECGLEFPDGRALINHRHSHNKEPSARQFSCQECGKTFGSRSSQQIHARIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGPEPRSSSSHSAVYVCKVCAAAFSTSEQLCAHLIQHSDENTAKHRMPRLGPRKYKRRRKLNSHELNMLSGSARGGEESSADEESDDGSSSAYKRKIIKKKYKQKGKSNPDENYETVVKTFESVIENLNSIVSHSKTEQPEKERTEKKKHKIKRRATTGEGKRPRTTAISNNNGATVRPVVARRMDLSSGGFVKSNRPAGEGRIRPRTKNVTVSTLAALKAVSSPLPIGSSGRAGPRTKNVNYHNVKQSKISPAIFPKKELLVKYPPRCNVRCTRCYRQLSCIDTLIVFETLQDLFFAFWCPSNSWSSRSIVCGATVPVPGDDKQHHRLDDYI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00995559;
- 90% Identity
- iTF_00995559;
- 80% Identity
- -