Basic Information

Gene Symbol
Csrnp2
Assembly
GCA_030765055.1
Location
CM060949.1:240954731-240957071[-]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.1e-25 3.4e-20 75.3 0.1 175 218 43 86 35 86 0.95
2 2 0.33 1.6e+04 -2.1 0.3 58 85 326 353 301 386 0.53

Sequence Information

Coding Sequence
ATGTCGACAATGATATGCGGCACATTGACTACCTCGAAGCCCCGAGTGACGGCGATCATTAGTAGCAGGATTCCATTTGGTGCTGATGAGAGGATGCACCAAGTTGTGACATCATTTGTAGCTCCAGTGGATCGTCTAAATTTTCCATGTGGATGTTCACGAGATGGCTGTGCCAATTCCAGTGGCCGCATAGAGTTTAATCCAGTACGTGTACGAACGCATTTCATTCACACCTTGATGAGGCTTGAGCTAGAGAAGAAGCAGAAGCTGGAGGAAGGTGATGAGGAAGTTAAACAACAGAATGTGCACCACTGGGGATCTGCAGCACAGGACGAAGATCGCTTGTCTCAGTCTAATGCAAAGGATACAATGCCATCGCCAAAATTCAATGGCAGCTTGCTACGCGATGTTAGTTTGGGCTCAGGAGTGGAAGTGGAGTCTTGTGTTCATGCAGGATCTTTCACAAATTTACATTATGGTGCATCAGGTGAAGGGCCAGGTGGTGGTGAAGCTGGTGATGCAGGAAGGATGCCTCCTTCCACAAGCACATCCTCTTCAGGATTTGTCGGTGATTTACCTGCAAGAGAAGATTCTCTGGATTTGTATGCATTCAGAGATGAGTGCTACTCTGAGGAGAACAGCAGCGAATTGTCTACTGAGCATACTGGGGACGGAGACAGGAACAATGCTCGTTTCAACGTTCATCATAAACAGGAGTTTGGTGCTGCACCAGACTTCCATTTCAACCAATCAAGTGGAAGACCATTCACTACTTCTGCAGGTATAATGTTTTCTGATTCTGGTTCCTCGACATATCCTCAGCAAAGTTCTTCTGGGACAGCATTTACTGAGGAAACAGCCTCCAAGTACCAGTACTCGACAACATTCTCTAACTTCTCTGGCACACACCAGAGTTCAGAAAGCTTTAATCATTATGGTACAATGTACGAGTTTGGTGGAGCAAAGGTACCAACCTCAACAGAAAGGGAGAACAACCAAGCTGCAGACTTCCAGCAACACcagcaccaacaccaccatcacctcAGTGGAACCAGTAACGGTTCCTATGAAGGGTTTTCTATGTTGGGAGCAAATAACGAATCTAATTCTGGCAGCTTGGTGCACAACAATCATTACACAAACCTCCACACAGTGCAGTGCCCCATGAGCAGCAAGCTAGAACCATTTTCTGAACTACTGCAGGGTCGCTACTCGTCGTACATGGCGACAGCCAGGACAGGGTCCTTTGTAGACCCTCCTGTCACATTCACGAGCAACAGTGGTGAAGTCCCAAGGTCAGAGAATGATGAAGCGGAGAAAAACCAACATACTAGCGAGGCTTCAGGTACTGGAGACGAATGTGATGAGAACTTTGGtgaaattataaagaaaacaatGGTGGAAACCGTCTCTGCCTAA
Protein Sequence
MSTMICGTLTTSKPRVTAIISSRIPFGADERMHQVVTSFVAPVDRLNFPCGCSRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKQKLEEGDEEVKQQNVHHWGSAAQDEDRLSQSNAKDTMPSPKFNGSLLRDVSLGSGVEVESCVHAGSFTNLHYGASGEGPGGGEAGDAGRMPPSTSTSSSGFVGDLPAREDSLDLYAFRDECYSEENSSELSTEHTGDGDRNNARFNVHHKQEFGAAPDFHFNQSSGRPFTTSAGIMFSDSGSSTYPQQSSSGTAFTEETASKYQYSTTFSNFSGTHQSSESFNHYGTMYEFGGAKVPTSTERENNQAADFQQHQHQHHHHLSGTSNGSYEGFSMLGANNESNSGSLVHNNHYTNLHTVQCPMSSKLEPFSELLQGRYSSYMATARTGSFVDPPVTFTSNSGEVPRSENDEAEKNQHTSEASGTGDECDENFGEIIKKTMVETVSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-