Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_030765055.1
Location
CM060951.1:192459921-192489973[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 4.6 1.4e+04 -1.3 0.1 4 18 239 253 238 258 0.90
2 7 2.6 7.8e+03 -0.6 0.0 22 43 316 339 300 340 0.75
3 7 1.1e-11 3.3e-08 35.8 0.1 3 46 350 395 348 395 0.97
4 7 5.1e-09 1.5e-05 27.3 0.2 3 42 403 446 401 447 0.94
5 7 1.3e-06 0.0039 19.6 0.0 1 44 455 498 455 500 0.93
6 7 2e-08 5.9e-05 25.4 0.0 3 45 506 548 504 549 0.94
7 7 4.1 1.2e+04 -1.2 0.4 6 26 574 590 573 596 0.80

Sequence Information

Coding Sequence
ATGCCAGATGTATATGATATCATTGCTTATGCCGACGATTTAATGATAATGGTAGAAGTAAAGAACAGATTAGAATTAGTACAGAAATCAAAGTGGaTGGAGAAGCATCCATTTGATTTAGACAATGCTCATTTTGATGAGCTGTTCTACCATGCAGTGTATGGTAAACGTGAAATCATGCGCGATGATGATCCAGAGCAGATCATCTGTATGAATCGTAGTCTTCCACCAGACCAGCAGATACCAGTGGCAGAAGTGGAAGGAGATTACCCTGAGGTGTTAAAAGACACAAAAGATGAAAACCTACCATTTTACAGACATccatttattcttaatttaatatgcAATGATGTAAAAAGAGAATATAGTGCTCTTGATGTcgataaatatttagaaatagacAAGTACAGACCAACTCCAAGAATGTGCAGGTTTCTCTCACTGGTTATCACTAAAATATTGCTCAAGTTAGAGCAGGAGCTTACTACTACGCATAAAAATTCTTTGTCAGATATTTCTGTAAATCAGAGCAAAATACAGCAAATGAAATTGTTAAAAAGTCTTCCTAACAGAGGGAAAATGACATGGCAGAATATACATGGAATGCCATACTTTAAAGATGTGAAGTATTTTACTTGTCCACGAAATGAAGACGCACAGTTTAAAAAATTGAACAATGAGCTTCTGGTCAGCGAACTACAAGAAACCTATGGCTGGAAGCCTGCCGATCGTAACAAATTGGAAGAGGCAATCAAAAAAGAGGAAATTACAAAACGTTCAGAGAAACTTAAACTTGACTTAGTAAAATTGTCTAAATGTCTAGATGCAGCCAAAACTGAGCAGGAAAAAGCTGAGCTGGAAAATAAAATGAGTGCATTGCCTTCTTTAAAACAGATTGAGAGCATGTCTCTAGAAGAACTGTGTGATGATATTGAACGGGAATATGATTGGCTGAAAATAGCAGCTCAGGTCTTCCATGGTTTTAAACTTCCTGAGGATTGTAGAGCAGCTTGGCGAGTAAAATTTCATCCCAAAATAAACACAAGTGATTGGACGgatgatgaaaataaaagatTGAAGGCACTTGTTAAAGAATATAATTTCCAAAACTGGGAAGCAATAGCAGAAAACCTGGGAACAAACCGTACTCCTATATTAGTGATGCAACATTACCAACAACACCTTAATGAGGAAATGATAAACAAGACATGGACTGAAGAAGAAGATGAGTTACTGGTTCAACTCGTAGATAATTACAGTATTGGTTCTGACATCTATTGGAGTCAACTATCACAGTATCTTAAAGGACATACCATGCAACAAATGTATAAACGTTGGGCATGCATCAATCCAAATATATGTAGAGGACCCTTCCTAAAGGCTGAGGATATGCTTCTAGTAGCAGCTGTACGCAGCTTTGGGGACAATTACTATAAATTGTTGGACCTGTTTCCAAATCGGTCACGTGAATTGCTTTGCAGCAGATACAAAAAGCTTACAAAGCTATGCCCAAACACATGGAATGCtattgaaaataaaaagttagtCTCATTAGTTGAAAGATTTGGAGAAAAGTGGCCAGATATAAgtgaatattttaataatcaGACCCCAACATCCCTGAAGGAACAGTATGCCACACTCAAGGAAAGGCAGTTGCAGATTACTTACCCCTCAACAGAAACTGAAcatgaggaggaggaagaagaagtagcagaagaagaagaagaagactcatTTTGTGAAGAACATAAACTATGGAAAAAAGTTCAGCAAGTTTGTCCAGTTTTGAAAGAACATGGTAAGTTGGACATTAATGGTTTAAAAGAATTAAGGAAAATGCTGATTAATGATACAAAAATGCCATTCCAGAGTTTGCAAAGACTGACCCCCTTTGACAAGAAGTGTTATGAGTATTTCAAATGTGTGGCTGATCCAGATACTATGCTTATAATTAAACTTTATGAGAATAAGACGAGGTTGGATAATCCTAATGTACTTAAATACCAATTGCATCTTCTAAATGCCAAGCTTGAGATCCCCAATCAAGAGTTTCTTTCAAGTCATCCTCTACTTAAAAAACAAGACCAGCTTCATCTGAAACTGCTGTCTGAAGAATCATTCATGATTcccaaagaaagaaggaaggatgagatgtGCATACAGTACTCTTTGCCACCAAACTTAACTACACTAGGTGGATTTTATTCAATGATGCTACATCGACGGTATGTCTTAGATGTGCAAGAACAGGAAGAGAAGAAAGAGCAGAAAGTGTGTGTCCAGGCAGCAGATGCAGATAATTTGTTTCGAGAAAGGTTTCGCTTTTTGTTTTTGAGGGCAGCTCTTGCTACAACAGTTCCACCGGCAATACGGCAAGTTCCTCCTATTGAGGATTCCGTAGATTACTTCTCTGAGGTTACTGTACCTAAAAATCGGAAGAGGGAAGCAACAAGGGTAGAGTTACTGAACATTTTTGGACCAAAACTGAAACGAAAGATTATAAGCAGTAAAGTTAAGCAGGATTTGGTCAACAGCAGCAAGAAGGGTTCTGGTTCTGTATCAGATGATGCAGTAGCTAGCACTTCTGACAAAGTGGCAAGTAACATTGATGAGAAATGCTCGCATTTCACCAAAGAAGATTTTGTGGTGCTCATTGGCGGCAGTAACGATGTTGCAAACGGTGATGTGAGTGACTTAGTGGAAAATCATGGAACGTGTAATCCAGGACCTACACCATACAAACGTGATAGTCGTTAA
Protein Sequence
MPDVYDIIAYADDLMIMVEVKNRLELVQKSKWMEKHPFDLDNAHFDELFYHAVYGKREIMRDDDPEQIICMNRSLPPDQQIPVAEVEGDYPEVLKDTKDENLPFYRHPFILNLICNDVKREYSALDVDKYLEIDKYRPTPRMCRFLSLVITKILLKLEQELTTTHKNSLSDISVNQSKIQQMKLLKSLPNRGKMTWQNIHGMPYFKDVKYFTCPRNEDAQFKKLNNELLVSELQETYGWKPADRNKLEEAIKKEEITKRSEKLKLDLVKLSKCLDAAKTEQEKAELENKMSALPSLKQIESMSLEELCDDIEREYDWLKIAAQVFHGFKLPEDCRAAWRVKFHPKINTSDWTDDENKRLKALVKEYNFQNWEAIAENLGTNRTPILVMQHYQQHLNEEMINKTWTEEEDELLVQLVDNYSIGSDIYWSQLSQYLKGHTMQQMYKRWACINPNICRGPFLKAEDMLLVAAVRSFGDNYYKLLDLFPNRSRELLCSRYKKLTKLCPNTWNAIENKKLVSLVERFGEKWPDISEYFNNQTPTSLKEQYATLKERQLQITYPSTETEHEEEEEEVAEEEEEDSFCEEHKLWKKVQQVCPVLKEHGKLDINGLKELRKMLINDTKMPFQSLQRLTPFDKKCYEYFKCVADPDTMLIIKLYENKTRLDNPNVLKYQLHLLNAKLEIPNQEFLSSHPLLKKQDQLHLKLLSEESFMIPKERRKDEMCIQYSLPPNLTTLGGFYSMMLHRRYVLDVQEQEEKKEQKVCVQAADADNLFRERFRFLFLRAALATTVPPAIRQVPPIEDSVDYFSEVTVPKNRKREATRVELLNIFGPKLKRKIISSKVKQDLVNSSKKGSGSVSDDAVASTSDKVASNIDEKCSHFTKEDFVVLIGGSNDVANGDVSDLVENHGTCNPGPTPYKRDSR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-