Mrel060519.1
Basic Information
- Insect
- Mantis religiosa
- Gene Symbol
- -
- Assembly
- GCA_030765055.1
- Location
- CM060956.1:132643642-132646522[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-12 1.1e-09 40.2 0.1 1 40 10 49 10 54 0.89 2 2 6.8 6.4e+03 -0.7 0.1 14 23 131 140 127 142 0.75
Sequence Information
- Coding Sequence
- ATGGTAGATTCTGATCGAGGTAGATGGAGTGAAGAATCCTTGACTATGGCCATAGTAGCCGTTCAGGACAAGAAAATGGGTGTAAATGAAGCTAGCAGACAATATGGAATACCGTCAAGTACTCTTCGTAGAAGAATTGCGAAAAATTCTACGAAGAAGCTTCGACTTGGACCTTACGGTATTCTAGGATATGAGAATGAATTTCGCCTTGTTAATCACATTAAGAGGTTTGAAAGTTGTGGTTTTGCACCCACCAGCAAGGATGTCAGCATCCTAGCATATTCTTTTAGTGAGAAGTTAGGCCTACatggaaaattcagaaaaggatTGGCAGGCTATGACTGGTTCAGAGCGTGTATGCTGCGACATCCCAATCTTAGTATCAGGCAGTCAGATGGACTATCCATTGCACGAGCCCAAGGGCTTAGTAGGGATGTTGTGCATCAGTATTTTAACCTGCTGAAGAGCACCATGTTGGAATACGACTTGGTTAACAAGCCTGGCCATATATTTAATGTAGATGAGTCAGGTCTTCAGGTGATCCACAAGGTGGGCAAAGTGGTTGCCACAAAGGGCTCCAAAGAGGTGTGTCGATTAACAAGTGGAGAGAAACGTGAAACAATAACAGTGATTGCCTGCTGCAATGCGGAGGGAAATTTTCTGCCACCCATGTGCAACTTCAAAGGAGTAAATAAAAAGTCTGAATTTGAAGATGGAATGCCAGCAGGAGCTGCCGACATTCCGCAGGAACAGGCTCCTCCCCCTTCAAGCCCCGCCCCTTCGCTACAATATGTGAGGGGGAGAAGGAAGGCAGCTGACAAACTATTTTACCGCATTTTCCTTCCGTCTAGCAAATTGTTGAGAGTGAGGTGTTCCAAACAACTTGATTACTGGGCTGGGTCGCAACTTCCAATTACGTTACACAGCCCCTTCCTTCAGATTGCAACTCTCCCTCCCTTCCACCCTTCTCCAGGTCGAGATTGA
- Protein Sequence
- MVDSDRGRWSEESLTMAIVAVQDKKMGVNEASRQYGIPSSTLRRRIAKNSTKKLRLGPYGILGYENEFRLVNHIKRFESCGFAPTSKDVSILAYSFSEKLGLHGKFRKGLAGYDWFRACMLRHPNLSIRQSDGLSIARAQGLSRDVVHQYFNLLKSTMLEYDLVNKPGHIFNVDESGLQVIHKVGKVVATKGSKEVCRLTSGEKRETITVIACCNAEGNFLPPMCNFKGVNKKSEFEDGMPAGAADIPQEQAPPPSSPAPSLQYVRGRRKAADKLFYRIFLPSSKLLRVRCSKQLDYWAGSQLPITLHSPFLQIATLPPFHPSPGRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -