Mrel053963.1
Basic Information
- Insect
- Mantis religiosa
- Gene Symbol
- -
- Assembly
- GCA_030765055.1
- Location
- CM060955.1:12541833-12542462[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-13 1e-10 43.5 0.0 2 41 19 58 18 62 0.94 2 2 9.3 8.7e+03 -1.1 0.0 16 23 135 142 132 144 0.80
Sequence Information
- Coding Sequence
- ATGCCAAggaaataccaaagaaagatTGGTGTTTTACGTCGAGGACAATGGGAGGAGGACACTTTGCGTGAAGCAGTTAACAGAATTATGAAGGGAGACATTGGCATCAGAGAAGCTTCCAGATACTATGGGATCCCTGAAAGCACTATACGAAGAAGAAAATCTACGAAAAACTTAAGCAAGTCTTCCCTCGGTCCAGAAGGAGTGTTCGGAAAGGAAAATGAGAAGCGATTAGTGAAGCACATAAAAAGACTTGCTTCTTTAGGATTTGCACCAGGCCGAAAATCAGTGCGACGCATGTCTTTCCAGTTTGCTCAGTCGCTGGGGTTGAAGCATTCGTTCAATATGACAAAGGAGAAAGCAGGTTATGACTGGATGttgtcatttttggaaagaaatccTGAACTTAGTTTAAGGCAAGCACAAGGACTTTCTGTAAACAGAGGCCAGGGCTTAGGTAGgcaagaagtaaatatattttttaacttgCTTGAGAAGATCTTAACAGAACACCAGCTGTTCAACAAGCCTGGTAACATATTTAACATGGATGAATCAGGAATTCAAATTATAAATAAGCCAGGGAAGGTTCTGACAGAAAAAGGTGCCAAGATAATTTTTGTGCCCTGA
- Protein Sequence
- MPRKYQRKIGVLRRGQWEEDTLREAVNRIMKGDIGIREASRYYGIPESTIRRRKSTKNLSKSSLGPEGVFGKENEKRLVKHIKRLASLGFAPGRKSVRRMSFQFAQSLGLKHSFNMTKEKAGYDWMLSFLERNPELSLRQAQGLSVNRGQGLGRQEVNIFFNLLEKILTEHQLFNKPGNIFNMDESGIQIINKPGKVLTEKGAKIIFVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -