Basic Information

Gene Symbol
ARID5B
Assembly
GCA_030765055.1
Location
CM060959.1:1866301-1872090[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.6e-21 1.1e-16 63.4 0.0 13 89 1 75 1 75 0.94
2 2 4.3 6.8e+04 -3.3 0.0 21 34 192 205 178 206 0.70

Sequence Information

Coding Sequence
ATGAAGCTGCGACAGACACCCATCGGCCGAGTTCCTCATCTGGGATTCAAAGAGAttgatctgtttgcATTCTTTACAAAAGTTCAGAAACTTGGAGGTTATAATGCAGTAACTGCAAATCGCATGTGGAAGCCAATATATGACGACTTGGGAGGTCACCAGGGGAGTACAAGTGCTGCCACCTGCACGCGGAGGCATTACGAGAGACTTTTGCTGCCATATGAGAAGAGTGTGATGAGCGATGAGTCAAAAGAACGAAGACGTAGTAAATCCCAAGAAGATTCTCCAACAAAACTAGAGGATATGGATGTGAAACCACCAGTGACAACAACGTGTAAGACACCTGAAGGGAAGACGTCATCATCTCTAAGGAGCGTTAGAACGAAAGCGGACAAGAGTCAGCAAGATGGGAATGCGACGCAGCAGCCAAAAGACAAAGAGAACATCCCGTTATTAAACAGGACGGAGCTGGAGGTGAAACAGGAGCCAGGGAGCAGTGAAAGCAGTGGTAGTGAACGACCCACACCTGAGTTAATAGACCTTGTATCAGAGCAGGACTTGTCAGCAACCAAAGCGCCAGTGCCGGCATTAAAGAAACGTAAGCTGGACATTCTTAAGGAAGGTGGTTTGGAAGTGACTGCCATTACACCGCCATCAACGTCAATTGGTTCCGTTACAATAACACCAGACAGACGACCTACGGTCATCCAACATGCTGCTCCTGCGATGGGGCAGGTGTCCATAACAGTGACTCCAGACCTAAGCCATATGCTTGGGTCGCCACCTGCAGATTTAACATCATCATCTTCCACACCCTCCCCAACCGCAGGATGTGAGTCCTCGAGGCAGGTCCAGCAGAATCCATATGTGCGATCTCAGACCCCAAGTTCAAACAGTAGCTCTGACGGATGGGCTCCTCCCCGTGTAACGCAGTCGCGATCAATATATGCGCATTCTGAGAAAACTGTGTATGGTAACCCAAAGGATGCTATTGAACCACCATCTAGTTTGTTGTACCGTAGGAAAACTTGCATGAAACCAATGGCAGTGGCAACAGTAACGGCAGCACCTCCTGGTGGCGAAGTTCTTGACCTACGGGTCAGTAATACACGGAAACCTGCCATTAGTATTAGCCGAGTGTCTGTAACACCATCTCCTCAGAACAATATAAGGAATACTGTTAGGCTGCCACAATCAAAAACCAATGGTGTCTCCCCATTTCCTCTTATTGATGGACGTGCGGTGGTGGGCTCCAATCTGGAGATAACAGTCGTGGATGTTCCCAAATCTTCATCAGCTCTACCTCAGAGACAGCTGCACCAACAGAGGGTTATGTCACAGCAGCGGAGGCCAATACATGTCAAACCTGCTTCAGTATCTGCTCGACTAATGCCTAACAATAAACATAGCAGTCTCGCAGTATCCCACATCGCACCCCACAGAAACAACAATGCTCAGCTGGTGATCCCCAACCCATATGGGTcaaccagtagcagcagcagcagcagcagctccaGATCACGCCAGCAAATGCCAGCTGCTGCACCGTCATCACAGCCTGCTACGCCAACTTCAAGTTCCATGCCATACCTACCATCAAACTCGTCTCTGTTCCCAAACTTTCTGTCGCAGTTAACGTCAACTTCCGGAGGGGGCAGTGCCTCCAAGAGCGCCTCACAATATCATCTTCCATTACTAGATCCTGTGTATTATTCCGCTTTGTATGGAAATCCTGGGCTGTACCCTCAATcagcagcagctgctgcagcATTTCTCTCGCCTCCAATGTTTGCGCCAACAGCAGAACAATTGCAGTTGTATAAAGAGTTAATGAACCATCATCATGGAAGTCCTCACTTTACGCCACCAGGAAGCAGTAGTGCCATTGGCAGTATCCTAGGGCTGCCCCGTGACGGTTCAACTTCAATAACTCCGGTTGGTCGCTCGTCCACCCCCACCTCAAAATGA
Protein Sequence
MKLRQTPIGRVPHLGFKEIDLFAFFTKVQKLGGYNAVTANRMWKPIYDDLGGHQGSTSAATCTRRHYERLLLPYEKSVMSDESKERRRSKSQEDSPTKLEDMDVKPPVTTTCKTPEGKTSSSLRSVRTKADKSQQDGNATQQPKDKENIPLLNRTELEVKQEPGSSESSGSERPTPELIDLVSEQDLSATKAPVPALKKRKLDILKEGGLEVTAITPPSTSIGSVTITPDRRPTVIQHAAPAMGQVSITVTPDLSHMLGSPPADLTSSSSTPSPTAGCESSRQVQQNPYVRSQTPSSNSSSDGWAPPRVTQSRSIYAHSEKTVYGNPKDAIEPPSSLLYRRKTCMKPMAVATVTAAPPGGEVLDLRVSNTRKPAISISRVSVTPSPQNNIRNTVRLPQSKTNGVSPFPLIDGRAVVGSNLEITVVDVPKSSSALPQRQLHQQRVMSQQRRPIHVKPASVSARLMPNNKHSSLAVSHIAPHRNNNAQLVIPNPYGSTSSSSSSSSSRSRQQMPAAAPSSQPATPTSSSMPYLPSNSSLFPNFLSQLTSTSGGGSASKSASQYHLPLLDPVYYSALYGNPGLYPQSAAAAAAFLSPPMFAPTAEQLQLYKELMNHHHGSPHFTPPGSSSAIGSILGLPRDGSTSITPVGRSSTPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-