Basic Information

Gene Symbol
Kdm5a
Assembly
GCA_030765055.1
Location
CM060947.1:30150394-30154953[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.1e-24 3.4e-20 74.6 0.1 2 89 81 164 80 164 0.95

Sequence Information

Coding Sequence
ATGGGAAATGACTTCCGATTTATTGTACCAAAGAATGTGCCAGTGTTTGAGCCAACAATGGAGGAATTTGAAGATCCACTAGCATACATCAAGTCAATTCGGCCATTGGCTGAGCAAACAGGAATTTGCAAAATCAAACCACCACAAAACTGGCAGCCACCTTTCACAGTTGATATCGACAATTTTAAGTTTACTCcaagaaaacagcgattaaacgAACTTGAAGCAAATACGAGAATAAAGCTAAACTTTCTGGATCAGATAGCGAAGTATTGGGACTTGCAAGGTTCCGCACTAAAGATTCCACAAGTACAAAACAAGCCATTGGATCTTTATACACTTTATAAACTGGTAAAGGAATTAGGGGGAACGGAAATAGTAACCAAAGAGAAAAAGTGGACATTAATTGCTCAAAAAATTGGTCTCACTCCTGATAAAGATCTCGAAAATGTGTTAAAAGGTCATTTTGAAAAGATTTTGATGCCTTATGATGTATTCCAGCAAAATAATTGTACAGGTAAAATTAAGATGCACGTGGAGAAGGAAGAAAATGATGGAAGATATAACCAAAATTACAAACCACATGGTATTGTTTCAAGACAGGCAATTAAGCCACCACAAGAGAAATACTGTAGAAGATCACAGCTTGAGGTTAGGACATCGGCCCATGGTGAAGAGAAACCCAAAGTATGCAGAAGTAAGGAGTTACAGCGTCTGCAGTTTTATGGTGCTGGCCCCAAGATGGCAGGTTATCAGTATCTCAATGAGGaggatatgaaaaataaaaccagaggaaagaaAGTCAACTATCAGTTTGATCCTCTGGCTAAATTTACTTGTCAGATGTGTGGTGGAGATGATATGGAAAAACGCATGCTGCCATGTGATACAtgtgatcattattatcatatgtTCTGCCTTTTGCCTCCCATGCAGGAACTTCCTAAGGATTACTGGAGTTGTCCTAAGTGTGTTGCTAAGGAAGTAAGCAAGCCAATGGAAGCCTTTGGTTTTGAGCAGGCAGAAAGAGATTACACCTTACAAGAGTTTGGCCAGAAGGCTGACAAATTTAAACAGAACTATTTTGGTGTTCGAGGATGCCTTGTCCCGTTGGATGtagtggaaaaggaattttggcGCATCCTCTCTTCAATTGATGAAGATGTTACAGTTGAATATGGCGCAGATCTACACACAATGGATCATGGATCTGGGTTTCCCACTAAGTTCACACCAAATATGCACCCAGTAGATGAAGTTTATGCACATTCAGGCTGGAACTTGAACAACATTCCAGTTCTTGAAGATTCAGTGCTGGGTCACATCAGTGCAGATATATCAGGTATGAAAGTTCCTTGGATGTATGTGGGAATGTGTTTTGCAGCATTTTGCTGGCATAATGAAGATCACTGGAGCTACTCAATCAATTACTTACACTGGGGTGAACCTAAAACGTGGTACGGAGTGCCAGGAAGCCAGGCAGAGAAGTTTGAAGCAGCAATGAAGAAGGTGGCGCCTGAATTATTTGACTCGCAGCCAGATCTGTTACACCAGCTTGTGACTATTATGAATCCAAACACATTGATGGAAGAAGGAGTGCCAATTTTCAGAACTGATCAACAGGCAGGAGAATTTGTGCTGACATTTCCAAGAGCATATCATGCTGGTTTCAATCAAGGTTTTAATTTTGCAGAAGCTGTTAATTTTGCTCCAGCTGATTGGTTGCCTATAGGCAGAGAGTGTATTGAACATTATTCTGCACTGCAGCGTTTCTGTGTATTTTCTCATGATGAACTTGTGTGTATTATGGCTCAAAAACCTGAAAAGTTGAATAAGACAATGGCTACAGCCACATACAAGGACGTGTTACAGATGTTTAAAAAGGAGCAAAAAATGAGAAAGTCTGTGTTGGAATGGGGAGTTAAAAAGGCTGAACTTGAACTTTTTGAACAGTTTCCAGATGATGCACGTCAGTGTGAAGTTTGTAAAACTACTTGCTTTCTCTCAGCAGTCACTTGTGAGTGTGCAGATGAAAAGTTAGTTTGTCTGAGGCATTTCACATTACTTTGTGACTGCCATCCTGACAACCATATCCTCAAGTATAGGTACACAATGTACGAACTTGCAGAGTTAGTTCggaaattgaagaaaaaagtgGATGCTTTTGATGCTTGGCTTGCAGATGTGAGGGCTGCACTAGATCCAGAATCAGGAAAGAAAAAGGAACTTGAAGAATTAAAACAGCTGCTGCAGGAAGCAGAAGAAAAAAAGTTTCCTCATTCTGAATTGCTTGAAAAAATGGCTGAAATTGTGGAACATGGTGAAAAATGTGCAAAAGTAGCAGAAGTCCTCCGGAAAAGACGATCCAAGTGTGGAAAAGCTACAAACATCAATGATTTTACAGTTGCAGAGAAACAAGCTCTTACTTTGGAGGACCTGATCCTATTTAGTTCCGAAATAGAACTTTCTCCTTGCCACATAAAAGAGTGTGATGATATAGGAAAACTGGTATGTGATGTGAAGATTTTCCAGAATGAAGCCTCTGAACTTCTACGGGAAAACACCAAAGAAGCAAGTGTAATAGAAGAACTGGTTGAAAAAGGCATTTCTTTAGATGTGAAGATTCCAGAACTCTGCAATTTGATGGATATGTTGAATAAAGTGAAGTTTTTGGACACTGTCAGAGCACTGCAAGAAAACATTAAACAGTTATCTATAGAAGAAATGCAGCAACAGTTGAAAATAGCCTCTTCACTAACATCTGATGAGGTAGTTACTGAGGCAGTGCCAGAGCTTCAAAATTTTCTTCAGCAAGCAGAAGCTTGGCAAGCAAAGGCCAAAGCTTATATTGAAGCAAACCCAAAAATGGAAATGTCTAACATAGAAGCATTGTTGATGGAAGTAGAGAATATGCCAGCTGTTCTACCACTTAAAGTGTACTTACAAGAGATAGCAGAAAAGGTAAATGAGTGGCTTCTTCAAGCAAAAGTACTGAAAGCAAAGCAGTACCTTCCCATAGACATACTAGAAAAATGTGTCAAGCAAGGCCAAAGCATTCCTGTACAGTTAGAGCTGCTAGCAGGGTTTGAGTTAAAGTTAAGAAATGCTGAAAACTGGAAAGTTAGGGCAACCCGTGTTTTCCTCAAGAGAAAATCTCAGTATTCTCTGACAGAGGTGTTGTTACCTAATTGTAAGCAACAGGATGCTCCCATTACTAGTGCAATAAAATGCATGGAAAATGACCAAAAGTTAATGGCAGCTGCTTACAGAGAAGCAGTAGAATTTGAGAAAGACACAACACGTCGCATTCAGTCAAGCAATTTAAAGAAGAGTGTTAGCATCTGTGATGTAACGAAGTATTGTATATGTGCTGGAACTGCATCTGAAAATATGTTGCAGTGTGAAGTGTGTAAAGATTTGTTCCATTTTACATGCTTACCCATCTCCAAGAAAACTGATTCAATCAATTCAGCCAAAGATCAAATATTTTTCTGCCCTACGTGCTTACGAACAAGGCGTCCACCACTCATGGTTATTCTTTCCTTATTGGTATCTCTATACAAGCTTGATGTTCGCATGCCAGAAGGAGAAGCACTACTACTTCTTGCTGAAAGGGCTTTGAAATGGGTGAATCAGGCAAGACAAGCTCTTTCTAGGGAAGAAATCAAATCCTTTATCGAAAAACTGTCACCATCTTTGCAGGAATGTATAAAGGCAGATTTAGCTAAGTGTGGTAAAGTTGCCAAAATTGCACATGGTCTTCTGCGAATAAATGGTGCAGAAAGCCAAAGTATGATTGGAAAAAATTCTAACCTAGAAATTGCACCAAacttagaagaaaataataattgtgATGATGTCAGATTTTTGCTGTCTACAAATTCAGAAGATACAGCTTTCTTAACTAAAGAAGTGCAGACTGAGTTAGAAGAGCTGTTCCTGAGTGGCTGTTTAATTGAGGCTTCACTCTCTGAATTACAGTGTATATGgagaattttgaaaataacaaAGCCTAAACATGTGATGCCTAAAATTGCTGATACAGTGAATAATGAAAAAGTAGCTGCAAAACGAAAACCAGAAAATGAAGAAGAATCACAACCTATTGGTAAAAGACTGCGGCAAAACAGAGAAAAGCAGACCAGAAAGATTCGTAATGCTGTTCAAAACAGTGATGGTGTAGCTGCTAATGAAGTCAAGCTCATTGAACCACTGGAAGCGagtaatgaagaagaagaagagtgtgGAGCACCAAAGTGCCTGAAGCCTACAGGAGAACAATTGGATTGGGTACAGTGTGATGGTATCTGTGAGAAGTGGTTTCATTTGAACTGCCTAGGACTATCAATGGATGATATCAGCAAGGAAAAAGAATATATATGCTGTCAGTGCAAGAGTGTGAAGGCATCCAGGcaagctgctgctgctgctgctgctgctacagtGGCTCCTGTTGAACCAGAAATAATTATAGTAAGTATCAGCAAATGGTTTACCAAACATAGTAGCAAGGTAAGTATCAAACCCTTCATACCAAAACCTGCCCTGAAATTCTTTTGA
Protein Sequence
MGNDFRFIVPKNVPVFEPTMEEFEDPLAYIKSIRPLAEQTGICKIKPPQNWQPPFTVDIDNFKFTPRKQRLNELEANTRIKLNFLDQIAKYWDLQGSALKIPQVQNKPLDLYTLYKLVKELGGTEIVTKEKKWTLIAQKIGLTPDKDLENVLKGHFEKILMPYDVFQQNNCTGKIKMHVEKEENDGRYNQNYKPHGIVSRQAIKPPQEKYCRRSQLEVRTSAHGEEKPKVCRSKELQRLQFYGAGPKMAGYQYLNEEDMKNKTRGKKVNYQFDPLAKFTCQMCGGDDMEKRMLPCDTCDHYYHMFCLLPPMQELPKDYWSCPKCVAKEVSKPMEAFGFEQAERDYTLQEFGQKADKFKQNYFGVRGCLVPLDVVEKEFWRILSSIDEDVTVEYGADLHTMDHGSGFPTKFTPNMHPVDEVYAHSGWNLNNIPVLEDSVLGHISADISGMKVPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAEKFEAAMKKVAPELFDSQPDLLHQLVTIMNPNTLMEEGVPIFRTDQQAGEFVLTFPRAYHAGFNQGFNFAEAVNFAPADWLPIGRECIEHYSALQRFCVFSHDELVCIMAQKPEKLNKTMATATYKDVLQMFKKEQKMRKSVLEWGVKKAELELFEQFPDDARQCEVCKTTCFLSAVTCECADEKLVCLRHFTLLCDCHPDNHILKYRYTMYELAELVRKLKKKVDAFDAWLADVRAALDPESGKKKELEELKQLLQEAEEKKFPHSELLEKMAEIVEHGEKCAKVAEVLRKRRSKCGKATNINDFTVAEKQALTLEDLILFSSEIELSPCHIKECDDIGKLVCDVKIFQNEASELLRENTKEASVIEELVEKGISLDVKIPELCNLMDMLNKVKFLDTVRALQENIKQLSIEEMQQQLKIASSLTSDEVVTEAVPELQNFLQQAEAWQAKAKAYIEANPKMEMSNIEALLMEVENMPAVLPLKVYLQEIAEKVNEWLLQAKVLKAKQYLPIDILEKCVKQGQSIPVQLELLAGFELKLRNAENWKVRATRVFLKRKSQYSLTEVLLPNCKQQDAPITSAIKCMENDQKLMAAAYREAVEFEKDTTRRIQSSNLKKSVSICDVTKYCICAGTASENMLQCEVCKDLFHFTCLPISKKTDSINSAKDQIFFCPTCLRTRRPPLMVILSLLVSLYKLDVRMPEGEALLLLAERALKWVNQARQALSREEIKSFIEKLSPSLQECIKADLAKCGKVAKIAHGLLRINGAESQSMIGKNSNLEIAPNLEENNNCDDVRFLLSTNSEDTAFLTKEVQTELEELFLSGCLIEASLSELQCIWRILKITKPKHVMPKIADTVNNEKVAAKRKPENEEESQPIGKRLRQNREKQTRKIRNAVQNSDGVAANEVKLIEPLEASNEEEEECGAPKCLKPTGEQLDWVQCDGICEKWFHLNCLGLSMDDISKEKEYICCQCKSVKASRQAAAAAAAATVAPVEPEIIIVSISKWFTKHSSKVSIKPFIPKPALKFF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-