Basic Information

Insect: Maniola jurtina
Gene Symbol: B0310.2
Assembly: GCA_905333055.1
Location: HG995236.1:1140958-1159989[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 1.4 67 4.6 1.5 1 23 382 404 382 404 0.97

2 11 0.041 1.9 9.5 0.8 1 23 411 434 411 434 0.93

3 11 0.44 20 6.2 0.3 1 23 438 460 438 460 0.92

4 11 0.0067 0.31 12.0 1.0 1 23 465 488 465 488 0.98

5 11 0.0045 0.21 12.5 0.7 1 23 492 515 492 515 0.96

6 11 9.7 4.5e+02 2.0 0.1 2 21 528 547 528 548 0.85

7 11 0.18 8.2 7.5 0.2 2 23 601 623 600 623 0.96

8 11 0.015 0.69 10.8 0.5 2 20 639 657 638 660 0.92

9 11 3.1e-05 0.0014 19.3 2.4 1 23 666 688 666 688 0.98

10 11 0.00038 0.017 15.9 2.8 1 23 695 717 695 717 0.98

11 11 0.00019 0.0088 16.8 3.0 1 23 723 746 723 746 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	1.4	67	4.6	1.5	1	23	382	404	382	404	0.97
2	11	0.041	1.9	9.5	0.8	1	23	411	434	411	434	0.93
3	11	0.44	20	6.2	0.3	1	23	438	460	438	460	0.92
4	11	0.0067	0.31	12.0	1.0	1	23	465	488	465	488	0.98
5	11	0.0045	0.21	12.5	0.7	1	23	492	515	492	515	0.96
6	11	9.7	4.5e+02	2.0	0.1	2	21	528	547	528	548	0.85
7	11	0.18	8.2	7.5	0.2	2	23	601	623	600	623	0.96
8	11	0.015	0.69	10.8	0.5	2	20	639	657	638	660	0.92
9	11	3.1e-05	0.0014	19.3	2.4	1	23	666	688	666	688	0.98
10	11	0.00038	0.017	15.9	2.8	1	23	695	717	695	717	0.98
11	11	0.00019	0.0088	16.8	3.0	1	23	723	746	723	746	0.93

Sequence Information

Coding Sequence: ATGAAAACTTCGCTTATAAAAATGAGGTGTTGTGTACGAAATTGTGGAAATGATACAAAAAAAACAACAAAGTGCCATGGAATCACGTTTCACATGTTTCCAAAAGAAACAAATCTCAGGAATTCCTGGATTGAAGCATTGGGTATTACAGAGTGGGAACCAAGAGATAGGAGCACAGTATGTTCAGAACATTTCCGACAAGATGCCTTCTATGAGACCAGACGAGGGTTGAGAAGGATTAAAAGTGGTTCTGTACCTATCCCCATACTTGAATCGGATGATTTGGACGCACCAGCTGCTTTAAGGGTGTGTCGAGTATGTCTGTCAATGAACGTGAAAATGTATCATATCACTGAAAAAAACCTTGGTGTTATGTATGAACAAATTGTTGGTATGTCTATACCGTCAAGTGATAGGCTACCACAAAAGCTATGTTGGGAGTGTGTGGCCAGACTGACTTCGGCAAGCAATTTTCAAAATAAGGCATTGAGATGTCAAAATATACTGGATAAATTAAATGTTGATAGATATGTTACAATAAGAGATATAAAATCCATAAGTCGGGCTCACAACCAACTGAAATCAAGTTTAGGACAAAAAGTATACGAAACCAACGAATATGACGTCGTTTATAACGAGAACGACAACGAAGTCGTTAAAGTGGAGGAGGTTAACGAGTTTAATGGAGTTAACGAATTTAACGAGAGTAACGATAACGCGAATAACGTTACCGGTGATTTCGATAACGACAACGATAACGAAAGTAACAGTGATTACAAATGCGAGGTAGAAATAAAAGATGAACAAACCAACAATCAAATATATTTCGAAGAGTATCCCGTTTTTGATGAAAGTGATAATATAAGTTTGAGCGAAATGTATAAGAAAAGTAAAGTTAAGAAGAAAAAAGAGAGAGTTAAGAAGGTTAGAGAAGGAACGCCAAAGATCAAGATTAAAAGGAAAAAGGAAGACAGTGATAACCCTTCAAGTACTATGGATAAATACAAAAAATCCGATGTCAAACGACGGAAAACCACCGACACTCTGGACGAATCCCTATTCACCATCACAACACTTACCTATGAAGAACAGATAGAAGAGATACAGACCCGGCAAAATGCGACGTCTTACAAAATTGCGCCTTTTAAATGCAACGCGTGTTACCGCGGCTTCCACGTCAGAGACCGATACGATGCGCACATTATACGACACAGCGATCAAAGCGGCGCCTACGAATGCTTCATATGCAAGACTCGACTGAAAACTGGTCGCGCTCTAAGAAAGCACCTCACCGCGCAGCATACGGAGAAGTTTAGCTGTAAAGGGTGTCCCTTTAGCACTAGGAACAGAGGTGTAGCGAGAGAGCACGAAAAATGGCACGCTGGCACGAAATATCAGTGTCCGCATTGTCCCAGCGAATTTGACAAGCTAACAACATATATGGGTCACATCAGAATCAAACATGTATCAGATTTCGTGTGTGAGCTGTGTGGATATACGTTCGTGAGCAAGAAAGGGATAGATGTACATAAGAAGAAGAAACACCGACTTGCCGACAAAAACGTAAGTTTAGATGGGCCGTACTGCGAGGTGTGCGAAGTAAAGTTCGTATCGGAAGAAGCCCATTCCAGGCATCTGAAGCTATCCTCTAGGCACAGTAGTGATAACGATCCTAATCGCATACGAAACGACTCGCAAAGTATGAACACGGAGAAAAATGGACGAGTTATGAGAAAAATAGAGAGACGGCCCACCATACATCCTCGAACCGGCATCGTTGGGAACGAAGGGTCTCCTGTAACTTGCGAACAGTGCGGGCTTCAACTGAGGGATCTCCGTTTGTATGCGCAGCACTTCCGGCGCGCGCACCCGGACAAGAATCGAACCAAGTACCCCGCCATGAAGACACCTTGTATGTGTGAGCAGTGCGGACGGATATTCCAGAGCATGGCCCTCCTCAAAGACCACATGTGGGTGCACACGGGCGAGAAGCGGTTCAAGTGCGACCGCTGCGACAAAAGCTTCACGCAGAAGACCAACCTCGTCTTCCACCTGCGAGTCCACAGCGCCACCAGGCCCACTTATGAATGCCCACTGTGTGGGAAGCACTTCGCCTTCTTCAACAACAGGAGACGACACATGTTTATCCACACGGGCCTGAAGCCGTTCAAATGTGACACTTGCGGCAAATGCTTCACGACCTCGGGCGAGCAGCGCGCGCACGTCGAACACGTGCACCTCAAGAAGCCGTGGCCCAAACGCGCGCGCGCCAAGCACTGCGAGGAGGACGCCTGGCAGAAGTGTGGCCTCAGACACGTGGAGGACTGA
Protein Sequence: MKTSLIKMRCCVRNCGNDTKKTTKCHGITFHMFPKETNLRNSWIEALGITEWEPRDRSTVCSEHFRQDAFYETRRGLRRIKSGSVPIPILESDDLDAPAALRVCRVCLSMNVKMYHITEKNLGVMYEQIVGMSIPSSDRLPQKLCWECVARLTSASNFQNKALRCQNILDKLNVDRYVTIRDIKSISRAHNQLKSSLGQKVYETNEYDVVYNENDNEVVKVEEVNEFNGVNEFNESNDNANNVTGDFDNDNDNESNSDYKCEVEIKDEQTNNQIYFEEYPVFDESDNISLSEMYKKSKVKKKKERVKKVREGTPKIKIKRKKEDSDNPSSTMDKYKKSDVKRRKTTDTLDESLFTITTLTYEEQIEEIQTRQNATSYKIAPFKCNACYRGFHVRDRYDAHIIRHSDQSGAYECFICKTRLKTGRALRKHLTAQHTEKFSCKGCPFSTRNRGVAREHEKWHAGTKYQCPHCPSEFDKLTTYMGHIRIKHVSDFVCELCGYTFVSKKGIDVHKKKKHRLADKNVSLDGPYCEVCEVKFVSEEAHSRHLKLSSRHSSDNDPNRIRNDSQSMNTEKNGRVMRKIERRPTIHPRTGIVGNEGSPVTCEQCGLQLRDLRLYAQHFRRAHPDKNRTKYPAMKTPCMCEQCGRIFQSMALLKDHMWVHTGEKRFKCDRCDKSFTQKTNLVFHLRVHSATRPTYECPLCGKHFAFFNNRRRHMFIHTGLKPFKCDTCGKCFTTSGEQRAHVEHVHLKKPWPKRARAKHCEEDAWQKCGLRHVED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00802332;
90% Identity: iTF_00953923;
80% Identity: iTF_00954539;