Basic Information

Insect: Maniola jurtina
Gene Symbol: -
Assembly: GCA_905333055.1
Location: HG995220.1:12602824-12604385[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.008 0.37 11.7 0.3 1 23 64 86 64 86 0.97

2 8 0.0031 0.14 13.0 2.4 1 23 112 134 112 134 0.98

3 8 5.3e-05 0.0024 18.6 0.3 1 23 142 164 142 164 0.98

4 8 1.4e-05 0.00064 20.4 0.3 3 23 172 192 170 192 0.96

5 8 7.7e-06 0.00036 21.2 4.5 1 23 198 220 198 220 0.99

6 8 0.4 19 6.4 6.6 1 23 226 248 226 248 0.98

7 8 0.36 17 6.5 1.0 2 23 258 279 257 279 0.94

8 8 2e-05 0.00091 19.9 3.0 1 23 291 314 291 314 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.008	0.37	11.7	0.3	1	23	64	86	64	86	0.97
2	8	0.0031	0.14	13.0	2.4	1	23	112	134	112	134	0.98
3	8	5.3e-05	0.0024	18.6	0.3	1	23	142	164	142	164	0.98
4	8	1.4e-05	0.00064	20.4	0.3	3	23	172	192	170	192	0.96
5	8	7.7e-06	0.00036	21.2	4.5	1	23	198	220	198	220	0.99
6	8	0.4	19	6.4	6.6	1	23	226	248	226	248	0.98
7	8	0.36	17	6.5	1.0	2	23	258	279	257	279	0.94
8	8	2e-05	0.00091	19.9	3.0	1	23	291	314	291	314	0.97

Sequence Information

Coding Sequence: ATGGAGACAAAGTCTGGCGTAGGAATTACTGACCACTGGATGAAAAGTATGATGGAGCCGGCCGGCAGCGACAAACAAGTACAGAACGACAACAGATCCTCAGTGAAACGCGAGAAGATGGCAGAAGCTTACAACGGACAAGACAATATGACTTACGAGATGCAAGTTAAGCAGCCGAGCGAGGGAAGGTACCGCTGTGACGTTTGCGACCTGGCGTTCGAAGGTATGGAGTATTTGATGTTACACAAGAAGTTCCACGGGAACGACAAGGACGGCCCGGTGATGGAGCCCGAGCCTCCGACGGCGAAAGAGGGTCCGAAGAAACGCAGGAAGTTCAAATGCGACCAGTGCGACGTCAAGGTCAACTCGCAGTACCATCTCGATATCCACCGCAGCAAGCACGAAGGTAACACTTCCAAAAAGTACATTTGCCAAGTCTGCGATCGCAGCTTCGTCGCCGCACAGTTCCTAAAAAGCCATATGCAGTCTCATTCTGCTACCAGTACCATAAACTGTGAGATTTGTAACAAGAATTTCACGGGCCAAGCGTACTTGAAACTCCACATGCAGCTACATAATGATATAAAGAAGTTCAAATGTTCTAAATGCGACGAAATGTTTCCAACGAAGAACTGTTTGAAGATTCACATGAAGAAACATACGAAAGTTAAAAATTTCAAATGTGATTGCTGTCACAAGTTGTTTGTGTCGAAAATAACAATGGAGAAGCATCGTCAGAGTCACGAAGGGCAGCCGATGGATTGTCACGTTAAATGTACTCAATGTGATAGAACGATGCACTCATCGTTGGTTCGAACTCACATTGCTCGGGCGCATCCTTCAACGATTGATGATGATGTTAAGAGACCTCACAAATGTATGACATGTGGAAAGAGTTTTATCGTTAAAATCAATCTCAACTTGCACATCCGAGTGTGCCACCCGGACCTGGCAGAGCCAGAAGACGAAGATGAGGATGTAATGACAGACAATTCTTAG
Protein Sequence: METKSGVGITDHWMKSMMEPAGSDKQVQNDNRSSVKREKMAEAYNGQDNMTYEMQVKQPSEGRYRCDVCDLAFEGMEYLMLHKKFHGNDKDGPVMEPEPPTAKEGPKKRRKFKCDQCDVKVNSQYHLDIHRSKHEGNTSKKYICQVCDRSFVAAQFLKSHMQSHSATSTINCEICNKNFTGQAYLKLHMQLHNDIKKFKCSKCDEMFPTKNCLKIHMKKHTKVKNFKCDCCHKLFVSKITMEKHRQSHEGQPMDCHVKCTQCDRTMHSSLVRTHIARAHPSTIDDDVKRPHKCMTCGKSFIVKINLNLHIRVCHPDLAEPEDEDEDVMTDNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00779714;
90% Identity: iTF_00960417;
80% Identity: -