Basic Information

Insect: Maniola jurtina
Gene Symbol: -
Assembly: GCA_905333055.1
Location: HG995216.1:11308165-11311124[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 3.8e-05 0.0018 19.0 4.9 1 23 186 208 186 208 0.97

2 10 0.00027 0.013 16.3 0.9 1 23 214 237 214 237 0.96

3 10 0.00079 0.036 14.9 0.1 1 23 244 266 244 266 0.98

4 10 3.1 1.5e+02 3.5 0.8 1 23 273 295 273 295 0.94

5 10 0.04 1.8 9.5 4.2 1 23 329 352 329 352 0.95

6 10 0.26 12 7.0 1.9 2 23 358 377 357 377 0.93

7 10 1.1e-07 5.3e-06 27.0 2.4 1 23 383 405 383 405 0.98

8 10 5.9e-06 0.00027 21.6 1.1 1 23 411 433 411 433 0.98

9 10 1.4e-05 0.00066 20.4 0.6 1 23 439 462 439 462 0.98

10 10 0.0018 0.085 13.7 2.2 1 21 468 488 468 489 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	3.8e-05	0.0018	19.0	4.9	1	23	186	208	186	208	0.97
2	10	0.00027	0.013	16.3	0.9	1	23	214	237	214	237	0.96
3	10	0.00079	0.036	14.9	0.1	1	23	244	266	244	266	0.98
4	10	3.1	1.5e+02	3.5	0.8	1	23	273	295	273	295	0.94
5	10	0.04	1.8	9.5	4.2	1	23	329	352	329	352	0.95
6	10	0.26	12	7.0	1.9	2	23	358	377	357	377	0.93
7	10	1.1e-07	5.3e-06	27.0	2.4	1	23	383	405	383	405	0.98
8	10	5.9e-06	0.00027	21.6	1.1	1	23	411	433	411	433	0.98
9	10	1.4e-05	0.00066	20.4	0.6	1	23	439	462	439	462	0.98
10	10	0.0018	0.085	13.7	2.2	1	21	468	488	468	489	0.94

Sequence Information

Coding Sequence: ATGGCTAATGTAAAGATTAGAGTTAACTCATCCAAAACTGTGTCGAAAACAGTAAAAGGGAGTGGTAAAATTGGTAAACACAAATCGTTATCAGGTTTTAACAATGTGAAGACTCGTTCTGTAATGAAAACTACTAACACTTCACTATCAAATGAAAAACTTAAATCTTCTCTCAACCAGCTCGTGAAAGATAAGGTGAAAGACACAGTGCTTGTAACAGATTCCAAACTCAAAAAGAAGATTCATATAGTGAAGGATAGATTTTTGAATGAAAACGGACATATTAAACGGAAGAACAAGGATAATTTAAGATTATGCAATGACATTTTGAAAAATGAATTATTAATATGCGACAATAAGGAAAAACCTACAAACACATCTCAAAAAAATCATTTAAATAACAATAGCATTATAGTCAGTGACCAAAATTCAAACTGTGAAAAGATTTCAAAAAACTTTTCAAAAGAAAAAGAGTGTAAAACAAAAAAATATTTGAATAAAGGTCCTCGTTTGCGGAAATATCCACAAAACAAACGCAAACCAAAGAAAGGTGTTTTTCAATGTGATTATTGCCATAAACAATTTGATACCAAGTCATCTATAAGGAGACATATGTATTTGCATCTGGATGTAAAGAAGTTTCCATGCGGCAACTGCAAAAAAGTTTTCCGCAAACAGTTATACCTGTCAGCTCATATTACAAGGCAACACCCAGATTGGGACCAACATTACATGTGCAATTTATGTGACAAACCTTTCCTGTTGAGAGAAAACTTGATGGTCCATATGGCTTCCCACACTAACACAGAAACAATGTTCAAATGCATTTATTGTAAAGAGAAATTCTTGGAGCAAATTGATTTAATACAACATGAAAAACAACATCTGGTCAGCGGCCTGTACGACTGCATTATATGTGAGCAAAGCTTCGACTGCAGAAATAAATTATCAATGCATTTCAAAACTCATCTACGAGTTAAAGATTTTATTTGTCAACACTGTGGTAAGGAGTTTTTACGGATGAATTCGATGAGACGTCATGTACAAATATGTCATGCTGGTATTAGAATACAGTGTGCAATATGTAAAAAGTACCTTAAGGGACATTTATCTGAACATATGCGGACACATGAGAAGCGACGTCCACATAAATGTCCAGACTGTGGACAGTCCTTTACACAATCAACTCAGTTGACTGTCCATCGACGTTCTCACACAGGAGCCCGGCCATATCCTTGCAGAATATGTAACAGACCGTTCACTCACTCAAATGCTCTCATGTTGCATATCCGACGTCACACCGGTGAAAAGCCATTCGAATGTGCAATGTGCCCCATGTCATTTTCACAATTGCCACACATGAAAGCTCACATGAGAAAAATTCACGGTAAAGAGAACCCTTATAGGTGTAAAAAGTGTCAACAGTTTTTCAAATTGAAGGTCCATCTCGAAAATCATGCAAAGGTCTGTAAGGTGGGAGAAAAAGAACTTTCGTTCGAAGAGAAGATAGAGGCTTCGATCAAGGTGGAAGAGGAAGAAGTTGTTGAGTCGGTCATGAGTTTGTCACGCATGAGATTCTTACTGGCTCTCCTACTCACAATGATTGCTACCAAAGAGAAACTGCAATATTTAGCGAACATCTTCGCCATTCTATAA
Protein Sequence: MANVKIRVNSSKTVSKTVKGSGKIGKHKSLSGFNNVKTRSVMKTTNTSLSNEKLKSSLNQLVKDKVKDTVLVTDSKLKKKIHIVKDRFLNENGHIKRKNKDNLRLCNDILKNELLICDNKEKPTNTSQKNHLNNNSIIVSDQNSNCEKISKNFSKEKECKTKKYLNKGPRLRKYPQNKRKPKKGVFQCDYCHKQFDTKSSIRRHMYLHLDVKKFPCGNCKKVFRKQLYLSAHITRQHPDWDQHYMCNLCDKPFLLRENLMVHMASHTNTETMFKCIYCKEKFLEQIDLIQHEKQHLVSGLYDCIICEQSFDCRNKLSMHFKTHLRVKDFICQHCGKEFLRMNSMRRHVQICHAGIRIQCAICKKYLKGHLSEHMRTHEKRRPHKCPDCGQSFTQSTQLTVHRRSHTGARPYPCRICNRPFTHSNALMLHIRRHTGEKPFECAMCPMSFSQLPHMKAHMRKIHGKENPYRCKKCQQFFKLKVHLENHAKVCKVGEKELSFEEKIEASIKVEEEEVVESVMSLSRMRFLLALLLTMIATKEKLQYLANIFAIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00802204;
90% Identity: -
80% Identity: -