Basic Information

Insect: Maniola jurtina
Gene Symbol: -
Assembly: GCA_905333055.1
Location: HG995236.1:3659369-3681890[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 5.6 2.6e+02 2.7 1.0 1 23 280 302 280 302 0.80

2 9 4.9e-06 0.00023 21.8 0.8 1 23 509 531 509 531 0.98

3 9 5.4e-05 0.0025 18.5 3.0 1 23 537 559 537 559 0.99

4 9 1.5e-06 6.8e-05 23.5 2.0 1 23 565 587 565 587 0.98

5 9 0.00095 0.044 14.6 1.9 1 23 593 615 593 615 0.98

6 9 0.0001 0.0047 17.7 3.4 1 23 621 643 621 643 0.99

7 9 0.00011 0.0049 17.6 2.6 1 23 649 671 649 671 0.98

8 9 9.2e-05 0.0042 17.8 6.1 1 23 677 699 677 699 0.99

9 9 0.0058 0.27 12.2 0.7 1 23 705 727 705 727 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	5.6	2.6e+02	2.7	1.0	1	23	280	302	280	302	0.80
2	9	4.9e-06	0.00023	21.8	0.8	1	23	509	531	509	531	0.98
3	9	5.4e-05	0.0025	18.5	3.0	1	23	537	559	537	559	0.99
4	9	1.5e-06	6.8e-05	23.5	2.0	1	23	565	587	565	587	0.98
5	9	0.00095	0.044	14.6	1.9	1	23	593	615	593	615	0.98
6	9	0.0001	0.0047	17.7	3.4	1	23	621	643	621	643	0.99
7	9	0.00011	0.0049	17.6	2.6	1	23	649	671	649	671	0.98
8	9	9.2e-05	0.0042	17.8	6.1	1	23	677	699	677	699	0.99
9	9	0.0058	0.27	12.2	0.7	1	23	705	727	705	727	0.98

Sequence Information

Coding Sequence: ATGCGGTGTTGCGTGGCTTTCTGCAAAAATACTTCCGACGATGTGTCCCCATCAGAGAGGAAGGGGATTAGCTTTCACGGTTTCCCCAGTGATATGCGCCTCCGCGCTGCTTGGCTCAGAGCCCTCGGCAAACAAGATAGTCATCTACCAGACTCTGCTGTGGTCTGCTCCCAGCATTTTCTAGCTGATGACATTTACGAAACAGAAAGTGGCTTAAAGCAGATTGTTACTGGTGCTATTCCTTCAAACGTGCAGGTTTGCATGATATGCCTAGACACTGACAGCAAGATGTTCCTAATGAGTAAACAAAAATTAGGCGAAGCATATAAAAACTTAACCGGACAGCCTTTGTGCGACCAAGGAAACCTAAGACAAACAGTTTGTGTACAATGTGCTCAGAGATTGATAAACTTTAATCAATTTAGAGACAAAAGCTTGAGAGCCCGCGCGCTGATGATGGACTTAGTTGAAAAACATAAATTAATTACAAGACAACATGTAAAAATGATAAACCGTACAAAATACCATCTAAAGAGTAATTTTGTGGTGACAATGCTAGGACCCGATCCCTGTGACTTGTACATACCAGAAGAACCCTCAGAAGACAAACAGACAGAATCAGAGGCAACTGAACACAGAGTTGTAGTTAAAAATGAAAATTATGACTCTAAGTCAGTTGATGAAGAAATGGTGGCAAATGAAGATAACAATAGTGTAGACAATGTTAATGATGAATCTTTTGCAAATAAGGAGGAATATTTCATTGATGATAGTGAAATGTTGGAATCAGAACTAACAGCTGAAACACAGGATCCTTTGAAGTGTGAAAGTGCTCCCTTCCAATGTACTCTTTGTTCTGAGGAGTTTGTCTGTGAACTTGCGTACATGCAACATGTGAGCATGCATATCCAGAAGGGTGATGGTGACTGTGGAATGTCCCAAGAATGCAAGCCTCATACGGCTGTGAGCTCTAGCTCCTCAGACTCTTCACTCCTCACAGAGAATAGGCAGGCCGTTCAGAAGCTGAACGATGGCCCTCTTCGTTCCACAGACTCGGCTCTAACCTCGGATGCTCTTTTATCCGCGGGCATTGCGACGAGTATCGAAAACCAAGCGCAATTAGAAGACGCCGGTACAGTCCAGAAAAGTAAACAAGTTTTGAAACCAAGCAATAGTGAATTGACAAAAAAACAATTCCACAACCAATGTGCGGATACCAGTAGTAAGACAAACATTAATAAATTAACAAATTGTGTAGTCAAATTATACGATGTCTTCAAAACACATAACAAGGATGTACTAATACGAGACAAAATGCTGGTGACAAACCAAACAACTGCTAAAGATTTCAACTGTCAGCTAGTTAGTCAGAACGAAGACATGAGAGATGCGATAGAAGATATTGCTCCTTTCACTAATAAAGTGGAAGTTAATAAGCTTAATGTTTCAAAAACTTTACAAAGTGAAACTGAATGTTCCAAAAGTGACAATTGTAAAAATAATTTACTGAGTGAGAAAAAATCGTTTACTTGTGACTTATGTGGGAGTATGTTCAAAAGAAAAGATAACTTAGTTACACACCTTAAGATACACACTGACATTATGCCATTCACTTGCAAGTTATGTCAATATAAAGCTAATCGTAAAAGTAATGTCAACCGACACATGCGAACTCACACTGGTGAAAAACCGTTTTCTTGTGAGTTGTGCAAATATAAATTTTCACGAAAAGGTAATTTAGTGAGCCACATGAGATCTCACACTGGTGAAAAATCTTTTTCTTGTGAGTTATGCGAGTACAAAACGGGTAGTAAGCATTATTTAGCAATTCACATGAGAACTCACACTGGTAAAAAACCCTATTCTTGCAAGTTTTGCAAATTTAAATCTTCAAGAAATAGTGATTTAGTTACTCACATGAGAACCCACACTGGTGAAAAACCCTTTTCTTGCAAGTTTTGCAAATATAAATCTTCAAGAAATGGTGATTTAGTTACTCACATGAGAACCCACACTGGTGAAAAACCATATTCTTGCAAGTTTTGCAAATATAAATCTTCACAAAAGAGTCATTTAGTTAATCACATGAGAACGCACACTGGTGAAAAACCTTTTTCTTGTGAGTTATGCGAGTATAAAGCTGCTCATAAACGAAGTTTAGTGATACACATGCGGGCTCACCAGCGAAAAACTCTTTTCTTGTACGGTATGCGGACCGTGCTGAGGCGACTGGACGACCGCGGGGAGGTGAGCGGGGAAGTGGGAGAGGCGCCGCATTCCAGCGAGGTGCAAACTTAG
Protein Sequence: MRCCVAFCKNTSDDVSPSERKGISFHGFPSDMRLRAAWLRALGKQDSHLPDSAVVCSQHFLADDIYETESGLKQIVTGAIPSNVQVCMICLDTDSKMFLMSKQKLGEAYKNLTGQPLCDQGNLRQTVCVQCAQRLINFNQFRDKSLRARALMMDLVEKHKLITRQHVKMINRTKYHLKSNFVVTMLGPDPCDLYIPEEPSEDKQTESEATEHRVVVKNENYDSKSVDEEMVANEDNNSVDNVNDESFANKEEYFIDDSEMLESELTAETQDPLKCESAPFQCTLCSEEFVCELAYMQHVSMHIQKGDGDCGMSQECKPHTAVSSSSSDSSLLTENRQAVQKLNDGPLRSTDSALTSDALLSAGIATSIENQAQLEDAGTVQKSKQVLKPSNSELTKKQFHNQCADTSSKTNINKLTNCVVKLYDVFKTHNKDVLIRDKMLVTNQTTAKDFNCQLVSQNEDMRDAIEDIAPFTNKVEVNKLNVSKTLQSETECSKSDNCKNNLLSEKKSFTCDLCGSMFKRKDNLVTHLKIHTDIMPFTCKLCQYKANRKSNVNRHMRTHTGEKPFSCELCKYKFSRKGNLVSHMRSHTGEKSFSCELCEYKTGSKHYLAIHMRTHTGKKPYSCKFCKFKSSRNSDLVTHMRTHTGEKPFSCKFCKYKSSRNGDLVTHMRTHTGEKPYSCKFCKYKSSQKSHLVNHMRTHTGEKPFSCELCEYKAAHKRSLVIHMRAHQRKTLFLYGMRTVLRRLDDRGEVSGEVGEAPHSSEVQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00954606;
90% Identity: iTF_00954606;
80% Identity: iTF_00954606;