Basic Information

Insect: Maniola jurtina
Gene Symbol: -
Assembly: GCA_905333055.1
Location: HG995236.1:1257591-1275705[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.013 0.61 11.0 8.3 1 23 149 172 149 172 0.98

2 10 0.00012 0.0054 17.5 4.4 1 23 195 217 195 217 0.99

3 10 0.018 0.81 10.6 6.2 1 23 223 245 223 245 0.98

4 10 1.7e-05 0.0008 20.1 2.5 1 23 541 563 541 563 0.97

5 10 0.0033 0.15 12.9 0.7 1 23 569 591 569 591 0.91

6 10 0.00059 0.027 15.3 7.6 1 21 597 617 597 619 0.95

7 10 7.9e-06 0.00036 21.2 1.1 1 23 625 647 625 647 0.98

8 10 1.2e-05 0.00055 20.6 3.7 1 23 653 675 653 675 0.99

9 10 7.9e-05 0.0036 18.0 2.3 1 23 681 703 681 703 0.98

10 10 0.0035 0.16 12.8 8.6 3 23 711 731 709 732 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.013	0.61	11.0	8.3	1	23	149	172	149	172	0.98
2	10	0.00012	0.0054	17.5	4.4	1	23	195	217	195	217	0.99
3	10	0.018	0.81	10.6	6.2	1	23	223	245	223	245	0.98
4	10	1.7e-05	0.0008	20.1	2.5	1	23	541	563	541	563	0.97
5	10	0.0033	0.15	12.9	0.7	1	23	569	591	569	591	0.91
6	10	0.00059	0.027	15.3	7.6	1	21	597	617	597	619	0.95
7	10	7.9e-06	0.00036	21.2	1.1	1	23	625	647	625	647	0.98
8	10	1.2e-05	0.00055	20.6	3.7	1	23	653	675	653	675	0.99
9	10	7.9e-05	0.0036	18.0	2.3	1	23	681	703	681	703	0.98
10	10	0.0035	0.16	12.8	8.6	3	23	711	731	709	732	0.94

Sequence Information

Coding Sequence: ATGGAGCAACAAGCCACTGCATCTATGTGTGACACAGGCTTTCTCATAGAACTTAAGGAGGAAATGTTAGATGACCCAGAGTGGCCCGAGGTCTCTCTTGTCTATGACAAGAACTTTATTGTACCCAAAGACGAATTATCCAACACACATCAGCACTTAGTCACTGCAGATTCCGACCAACCAATGATCAACATAGTAAAACCAATTAAAACAGAAAGGATATTAAGTAAAGATATCACTGAGTTGCAAAAATTATTTAAGTCATCTGAAGATACAAAAACGACATTTTGTAACACGGATGCCTTAACATTATGTTATATGAGGACACATGTTAAATGGGAACCTTCTCAAGCTGAGGAAAGTTTGGACAACCACCGACCAGTCGATGACAAAAAAACCGAACACGAGTCACAAGAATTTGAAGATTTGCTTCTTGAAAAAAGATTTGAATGCTGCCATTGTGAATACACTACTAACTATAAAGTTCATTTGATAAAACATTTACGTACAAAACACAGCAGTACAAAGCCAAAAAAAACTCCATTACTGTTGCACATGAGGACTCACACTGGTGAACAATCTTATTCCTGTAAATATTGTGATTATAAATGTTCAAATTCAGGTCGCCTAAAATTACACATGATGACTCACACTGGAGAGAAACCCTACCATTGTAAGCATTGTGACTATAAATGTCTTAGAAGTGGTGGCCTAACAGTTCACATGAGGATTCACACTGGAGAAAAACCTTACCATTGTGAGGAGGAAATAATAGAGGATCTATTAGAACCTAACATGGAAATAGAAATTACAGAAGCTGTCATAGTACCTAAGGAGGAAAAAGTAGAAGACCTTTTAGTACCTAAAGAGGAAATAACAGATAACCTCCTAGTACCTAAGAAAGAAGTTATAAAAGATCCTGGAGTACCTAAGGAAGAAAAAATAGACAATTTGTTAGTGCCTAACATGGAAATGGAAATAATAGGAAACCTAGTACTTAAAAAAGAAATCATAGAAGATCTTATAGTACCTAAAGAGGAAATAACAGAAAACCTCCTAGTACCTAAGAAAGAAGTTATAAAAGATCCTGGAGTACCTAAGGAGGCAAAAATAAACAACTTGTTAGTGCCTGACATGGAAATGGAAACAATAGGAAACCTAGTACCTAAAAAAGAAGTCATAGAAGATCTTATAGTACCTAAGGAGGAAATAGAAGACCTCATAGTGCCTAAAGAGGAAATAACAGAAGACCTAGAGGTAAACTTTGAAAAGGACTGTGATTATAGTAATGACTTCATTATACCAGAGCAAAAACCTTCCACCTCAATTCAACACTTGGAAGATTTGAACGAACAGAAAGAAATCAATAATTCAGTACTAATTAAAACAGAATCACCCTTTAATAATATTGTTCTATTACAAAGACAATTAGGAGTATCTGATGATGGGCACGACATAGACAAAAATATGTCTACCGGACATATTGTCACAGAGCCTAAAAATGAATCGAAGGATAAAGAAAGTGTTTCTGCAGACTGTTCTTCACATGACTCAACATCGCTGAAAGAATGTTTGCGGACCCAATGCGGTAGATACGTTAAGAAAAAGAAAAAGGAACCGCACATTTGCGAAATTTGCGACAAAGACTGTAAATACAAATACGCTTTGGTCGCCCACATGCGGACACACACTGGAGAGAAACCGTTCGCCTGTGACCAGTGCGACGCTAAATTCGCCAAAAAGTATTATCTAACTACCCACAAAGTCGCGCACACTGGTGAAAAACCGTTTTCCTGCCACATATGCCATGTCAAATTCTCAAGGAAAAGCAATCTGTCAACACACATAAAGTGTCACACAGATGAAAAGACGTACATTTGTTATCTGTGCGAGGCTACGTTTAAACAGAGGAATAGTTTGACTCGGCATATGAGAATTCACACTGGTGAAAAACTCTACTCTTGCAGTCTATGTCCGTCTAAATTCACACACAACAGTACGCTGAACAGTCATATGCGCACCCACTCAGGGGAGAAGCCTTTTTCCTGTGAGCTGTGTCACGCTAAGTTCATACAGAAGACTGCGTTGAATACACATATGAAGTCCCACTCGGACGAGAAGAACATTTGTTGCGAGCTATGTCCTGCTAAGTTCAAACATAAATGTAGTTTGACTATTCACATGAGGACCCATCACTAG
Protein Sequence: MEQQATASMCDTGFLIELKEEMLDDPEWPEVSLVYDKNFIVPKDELSNTHQHLVTADSDQPMINIVKPIKTERILSKDITELQKLFKSSEDTKTTFCNTDALTLCYMRTHVKWEPSQAEESLDNHRPVDDKKTEHESQEFEDLLLEKRFECCHCEYTTNYKVHLIKHLRTKHSSTKPKKTPLLLHMRTHTGEQSYSCKYCDYKCSNSGRLKLHMMTHTGEKPYHCKHCDYKCLRSGGLTVHMRIHTGEKPYHCEEEIIEDLLEPNMEIEITEAVIVPKEEKVEDLLVPKEEITDNLLVPKKEVIKDPGVPKEEKIDNLLVPNMEMEIIGNLVLKKEIIEDLIVPKEEITENLLVPKKEVIKDPGVPKEAKINNLLVPDMEMETIGNLVPKKEVIEDLIVPKEEIEDLIVPKEEITEDLEVNFEKDCDYSNDFIIPEQKPSTSIQHLEDLNEQKEINNSVLIKTESPFNNIVLLQRQLGVSDDGHDIDKNMSTGHIVTEPKNESKDKESVSADCSSHDSTSLKECLRTQCGRYVKKKKKEPHICEICDKDCKYKYALVAHMRTHTGEKPFACDQCDAKFAKKYYLTTHKVAHTGEKPFSCHICHVKFSRKSNLSTHIKCHTDEKTYICYLCEATFKQRNSLTRHMRIHTGEKLYSCSLCPSKFTHNSTLNSHMRTHSGEKPFSCELCHAKFIQKTALNTHMKSHSDEKNICCELCPAKFKHKCSLTIHMRTHH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -