Basic Information

Insect: Maniola jurtina
Gene Symbol: -
Assembly: GCA_905333055.1
Location: HG995233.1:2411647-2420092[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0018 0.084 13.7 3.1 1 23 20 43 20 43 0.97

2 16 5.5e-05 0.0025 18.5 0.4 3 23 80 101 79 101 0.94

3 16 0.071 3.3 8.7 0.8 1 11 135 145 135 148 0.93

4 16 0.0011 0.052 14.4 4.6 1 23 167 190 167 190 0.97

5 16 0.00039 0.018 15.9 1.1 3 23 227 247 226 248 0.93

6 16 0.00073 0.034 15.0 0.7 1 23 282 304 282 304 0.98

7 16 0.016 0.74 10.8 5.9 1 23 327 350 327 350 0.93

8 16 0.053 2.4 9.1 0.2 3 23 387 408 386 408 0.92

9 16 0.015 0.67 10.9 2.9 1 23 414 436 414 436 0.96

10 16 0.00015 0.0069 17.2 1.1 1 23 442 464 442 464 0.98

11 16 6.4 3e+02 2.6 0.1 1 14 470 483 470 484 0.88

12 16 0.00057 0.026 15.3 5.0 1 23 503 526 503 526 0.97

13 16 0.0057 0.26 12.2 0.2 3 23 564 585 563 585 0.94

14 16 0.0012 0.056 14.3 3.5 1 23 591 613 591 613 0.98

15 16 0.00015 0.0069 17.2 0.4 1 23 619 641 619 641 0.98

16 16 0.00016 0.0072 17.1 1.7 1 23 647 670 647 670 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0018	0.084	13.7	3.1	1	23	20	43	20	43	0.97
2	16	5.5e-05	0.0025	18.5	0.4	3	23	80	101	79	101	0.94
3	16	0.071	3.3	8.7	0.8	1	11	135	145	135	148	0.93
4	16	0.0011	0.052	14.4	4.6	1	23	167	190	167	190	0.97
5	16	0.00039	0.018	15.9	1.1	3	23	227	247	226	248	0.93
6	16	0.00073	0.034	15.0	0.7	1	23	282	304	282	304	0.98
7	16	0.016	0.74	10.8	5.9	1	23	327	350	327	350	0.93
8	16	0.053	2.4	9.1	0.2	3	23	387	408	386	408	0.92
9	16	0.015	0.67	10.9	2.9	1	23	414	436	414	436	0.96
10	16	0.00015	0.0069	17.2	1.1	1	23	442	464	442	464	0.98
11	16	6.4	3e+02	2.6	0.1	1	14	470	483	470	484	0.88
12	16	0.00057	0.026	15.3	5.0	1	23	503	526	503	526	0.97
13	16	0.0057	0.26	12.2	0.2	3	23	564	585	563	585	0.94
14	16	0.0012	0.056	14.3	3.5	1	23	591	613	591	613	0.98
15	16	0.00015	0.0069	17.2	0.4	1	23	619	641	619	641	0.98
16	16	0.00016	0.0072	17.1	1.7	1	23	647	670	647	670	0.96

Sequence Information

Coding Sequence: ATGGGCGGAGAAAAAGAAGAATTCACTCTCACCGTAGAAGCAGGCGGTACAAGGAAATTCACCTGCAAAGCTTGTGGGAAAAGTTTCAACCTAAAACCGCTGTTCACCCAACACTACAGGCATGTTCACTTGAAACTGCGTCCGAAATTGAGGAGCTGCCATTTTTGCAATAAGAAAGTTCCTTCGCACCTGCGCACGTTTCACATGGAGGAGTGCCACGGGCAACCGGCGCCATCTTGCGGTGTGTGTGGAAAGAAATTCGCTTTCGCCGGGCAACTGTTGCGGCATCAAAGATTCTACCACATGGGAGAATCCGACTACCGCTGCGAACCCTGCAATTTGAAGTTCAAATGTCGAAGCAAATACAATTATCATCTCGTCAAGCATAGAGATGTAAAAGCGTATAAATGCGAGCTTTGCGATAAGTCGTTCAAATGGAAGAGCGGAGAAGGAAAAGAAGAATTCACTCTAACCGTAGAAGTAGGCGGTGTGGAGAAATTCACCTGCAAAACTTGTGGGAAAAATTTCAAATTGAAACCGCTATTCACCCAACACTACAGGCATGTCCACCTTAAAAAGCGTCCGAAATTGAGGAGCTGTCATCTTTGTAACGACAAAGTGCTCCCATGGTTGCGTCCGTTTCACATGGAGGAGTGCCATGGACTACCAACGCCATCTTGCGGCGCGTGTGGAAGAAAATTCGCTTACCCCGGGCAACTGATGCGTCACCAAAAATTCCATCACATGGGAGAATCCGACCACCGTTGTGAACCGTGCAATTTAAAGTTCAAATGCCGCAGCGAATACAACCATCATCTTATTAAACATGGTGACGTAAAGGCGTACAAGTGCGAGCTGTGCGAAAAGTCGTATAAGTGGAAACGCGGCTTGAGAATGCATATGTTGGTGCACAATAATATTCGGCGGGAAGCAACAGAAGAGTTCACGCTAACAGTCGAAGCGGACGGGACGAAAAAGTTCACGTGCAAAACTTGCGGTAAAGCCTTCCACCAGAGGGCGTATTTCTACCAACACCACACGCAAGTCCATCTGAAAATGCGTCCGAAGTTACGCGGCTGCTACCTCTGTGACGTCAAAGTCACATCATGTATGCGAGCATTTCACATGGAGAAGTGTCATGGAATACCAGCGCCATCTTGTGGCGCTTGCGGAAAAAAGTTTCCCTTCCCCTGGCAAGTGTTGCAACACCAAAAATTCTACCACATGGGAGAATCCGAGTACAGCTGCGAACCGTGCAATTTAAAATTCAAATCCAGAAGCGAATACAACCACCATCTCGTCAAACATGGGGACGTGAAAGCGTTTAAATGCGAGCTGTGTGAAAAGTCGTTCAAATGGAAGCGAGGCTTGAGGACTCATATGTTGATACATAACAACATTCGGCGTCATGTGTGTCACGTTTGCCAGGACGCGTTTATTCAGCAGAGCAGCGAAGATAAGCCGCTGCCCTTCACGCTAACGAAAAACGAGGACGGCAGTCAAAAGTACAGCTGTAATTCTTGCGAGAAACACTTCAAGAGGCGGGACCTCTTCACTCAGCACTACAAAATGGTCCACCTAAATATGAAGCACCCTGCGTTTCGCAGCTGTCATGTCTGTAACGCAAAAGTGCGCACGCGCAAGCGCGCCGCTCACATGGAAACAGAACACGGAATACCAGCGCCATCTTGCGGCGCTTGTGGACGAAAGTTTGCGTTCCCCTCCGAAGTGTTGCGACACCAAAAATTGTACCACATGGGAGAAAAAAACTACCAATGTGACGTTTGCGATTTGAAATGTAGATCCGTTGGTCATTTGAAGGCGCATAAGATGAAGCATGTGCCCGATAGGCCGTTCAAGTGTGAGGTTTGTCAAAAGGCGTTTAAATGGAAGAGCGGACTGGATACACATATGATGATTCACTTGAATGTTAGGCCACATGTATGTCAAGTTTGCCAGGAGGCGTTCGTTCAGAAGTCAAGCTTGCGGTATCATTTATCGAGAAGGCATCCTGATGTGGTTTAA
Protein Sequence: MGGEKEEFTLTVEAGGTRKFTCKACGKSFNLKPLFTQHYRHVHLKLRPKLRSCHFCNKKVPSHLRTFHMEECHGQPAPSCGVCGKKFAFAGQLLRHQRFYHMGESDYRCEPCNLKFKCRSKYNYHLVKHRDVKAYKCELCDKSFKWKSGEGKEEFTLTVEVGGVEKFTCKTCGKNFKLKPLFTQHYRHVHLKKRPKLRSCHLCNDKVLPWLRPFHMEECHGLPTPSCGACGRKFAYPGQLMRHQKFHHMGESDHRCEPCNLKFKCRSEYNHHLIKHGDVKAYKCELCEKSYKWKRGLRMHMLVHNNIRREATEEFTLTVEADGTKKFTCKTCGKAFHQRAYFYQHHTQVHLKMRPKLRGCYLCDVKVTSCMRAFHMEKCHGIPAPSCGACGKKFPFPWQVLQHQKFYHMGESEYSCEPCNLKFKSRSEYNHHLVKHGDVKAFKCELCEKSFKWKRGLRTHMLIHNNIRRHVCHVCQDAFIQQSSEDKPLPFTLTKNEDGSQKYSCNSCEKHFKRRDLFTQHYKMVHLNMKHPAFRSCHVCNAKVRTRKRAAHMETEHGIPAPSCGACGRKFAFPSEVLRHQKLYHMGEKNYQCDVCDLKCRSVGHLKAHKMKHVPDRPFKCEVCQKAFKWKSGLDTHMMIHLNVRPHVCQVCQEAFVQKSSLRYHLSRRHPDVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -