Basic Information

Insect: Maniola jurtina
Gene Symbol: -
Assembly: GCA_905333055.1
Location: HG995233.1:5887323-5892829[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.3 60 4.8 4.6 1 23 257 279 257 279 0.96

2 9 3e-06 0.00014 22.5 1.5 1 23 399 421 399 421 0.98

3 9 9.3e-05 0.0043 17.8 5.1 2 23 428 449 427 449 0.97

4 9 0.00023 0.011 16.5 4.3 1 23 455 477 455 477 0.99

5 9 3.4e-05 0.0016 19.2 4.7 1 23 483 505 483 505 0.96

6 9 5.8e-06 0.00027 21.6 4.0 1 23 511 533 511 533 0.98

7 9 0.0013 0.062 14.2 5.2 1 23 539 561 539 561 0.98

8 9 5.9e-05 0.0027 18.4 1.8 1 23 567 589 567 589 0.98

9 9 1.7e-06 7.6e-05 23.3 3.8 1 23 595 617 595 617 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.3	60	4.8	4.6	1	23	257	279	257	279	0.96
2	9	3e-06	0.00014	22.5	1.5	1	23	399	421	399	421	0.98
3	9	9.3e-05	0.0043	17.8	5.1	2	23	428	449	427	449	0.97
4	9	0.00023	0.011	16.5	4.3	1	23	455	477	455	477	0.99
5	9	3.4e-05	0.0016	19.2	4.7	1	23	483	505	483	505	0.96
6	9	5.8e-06	0.00027	21.6	4.0	1	23	511	533	511	533	0.98
7	9	0.0013	0.062	14.2	5.2	1	23	539	561	539	561	0.98
8	9	5.9e-05	0.0027	18.4	1.8	1	23	567	589	567	589	0.98
9	9	1.7e-06	7.6e-05	23.3	3.8	1	23	595	617	595	617	0.98

Sequence Information

Coding Sequence: ATGCAGTGTTGTGTGCCTTTCTGCAAAAGAACTTCCGACAATGTATCAACATCGGACGGAGAAGGGAAAGCGATTAGTTTTCATGGTTTTCCCCTTGAAATGCATCTCCGTACTGCCTGGCTTAGAGCCCTCGGCAAACAAGACAACCTTCCAGACTCTGCTGTGGTCTGCTCACAACATTTTCTAAGTGATGACATTTATGAAACAGAAAGTGGCTCAAGGCAAATATGTGCCGGTGCTATTCCTTCCACAGTGCAGGTTTGCATGATATGCCTAGACACTGACAGCAAGCTGTTACTAATGAGTAAACTGAAATTGGATGAAGCATATGAGAAGTTAACCGGAGAGCCTTTGTGTGATCAAGGAAAACTAAAACAGACACTTTGCGTACAATGTGCTCATAGATTGATAAACTTCAGTAGATTTAGAGACATGAGCTTGAGAGCCCGTGCACTGATGATGGACTTAGTTGAGAAACATGAATCAATAACAAGACATCATATTACAATGATAAACCGCACAAAACACCAACTAACAAGCAATATGGTGGTGACATCGCTAGGCCCAGACCACTGTGACTTACACATACTAGAACATCTCTCAGAAGACAACCAGGAAGAATCGGAGGAAAGCAAACTAGAAGGTATCATGAAAATTGAAGGAAACGATGAGTCCACGTCGGCTGATGAAGACATGGAAATGGAGAATGAAGATGACAAAAATTTAATTGATTTTGTTGAGAATCCAGTAAAGTACGAAAGTGCTCCCTTCCAATGTGCATGTTGTTGGGAGGAGTTTGTCCATGAACATGCGTACATGCAACATATGAGCAAGCATGTCCAGCAAGGTGACGGTGATGGTGAATGTGTGACGTCACAAGAATGCAAGCCTCATACAGCTGTGAGCCCCAGCTCTGCACACTCTGCACTCAGCACTGAGAACAAGCAGGCGGACTTCAGCCCTTCTGCACATTCTACTCAAACCTTAGTCGCTCCCCTACCCGCGAGTCTTGCGACAAATAACGAGATACAAGTGCTCCCAACTGAAGAAGCCGATACAAACGTCAGTTGCCGCTACAACAGATTGACAGATTGTTTTGTCAAATTATACGATGTTTTCTCTAAGAAAGTTGTACCAAGACAAGATGGAAAAGCTGTTAGGTCTTGTAGTAGTTCACACACGGACGGAAAATGTTTCATTTGTGATATTTGTAGAAAATTGTTTAAACGAAAAAGTCTCTTAGTTAAACACATAAAGACTCACGCTGAAGTAAGATGGCTCACTTGCAAGATTTGCCAGTACAAATGTAAATATCAAAGTGTATTGAAGCGTCATATGAGAACCCACACGGGTGACAAGCCATACTCCTGCAAGATATGCGAGTTCAAATGTGCATATAGATCTAATCTAATGAATCATACGAGAACTCACACTGGTATAAAAAATTTCTTGTGTAAGTTATGCGGTTACAAATGTGCACATAATAGTAATCTAGTGACGCACATGAGAACCCACACTGGTGAAAAGCCATATTCATGTGAGATATGCAAGTACAAGTGTTCACAAAGAAGTAGTCTAATGAAGCATATGAGAATTCACACTGGTATAAAACCTTTCATGTGTAAAATATGCCATTACAAATGTGTACAAAATAGCATTCTAGTGAGGCACATGAGAACCCACACTGGTGACAAGCCATATTCATGTGGGATATGCGAGTACAAGTGTTCAGAAAGAAGTAGTCTAATGCAGCATATGAGAATTCACACTGGTATAAAACCTTTCTCATGCAAGTTATGCGATTACAAATGTGCACGTAATAGCAATCTAGTGAGGCACATGAGAACCCACACTGGTGACAACTGA
Protein Sequence: MQCCVPFCKRTSDNVSTSDGEGKAISFHGFPLEMHLRTAWLRALGKQDNLPDSAVVCSQHFLSDDIYETESGSRQICAGAIPSTVQVCMICLDTDSKLLLMSKLKLDEAYEKLTGEPLCDQGKLKQTLCVQCAHRLINFSRFRDMSLRARALMMDLVEKHESITRHHITMINRTKHQLTSNMVVTSLGPDHCDLHILEHLSEDNQEESEESKLEGIMKIEGNDESTSADEDMEMENEDDKNLIDFVENPVKYESAPFQCACCWEEFVHEHAYMQHMSKHVQQGDGDGECVTSQECKPHTAVSPSSAHSALSTENKQADFSPSAHSTQTLVAPLPASLATNNEIQVLPTEEADTNVSCRYNRLTDCFVKLYDVFSKKVVPRQDGKAVRSCSSSHTDGKCFICDICRKLFKRKSLLVKHIKTHAEVRWLTCKICQYKCKYQSVLKRHMRTHTGDKPYSCKICEFKCAYRSNLMNHTRTHTGIKNFLCKLCGYKCAHNSNLVTHMRTHTGEKPYSCEICKYKCSQRSSLMKHMRIHTGIKPFMCKICHYKCVQNSILVRHMRTHTGDKPYSCGICEYKCSERSSLMQHMRIHTGIKPFSCKLCDYKCARNSNLVRHMRTHTGDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00954609;
90% Identity: iTF_00954609;
80% Identity: iTF_00954609;