Basic Information

Insect: Maniola jurtina
Gene Symbol: -
Assembly: GCA_905333055.1
Location: HG995227.1:8804560-8821140[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0004 0.019 15.8 3.7 1 21 410 430 410 432 0.96

2 10 4.2e-05 0.0019 18.9 2.7 1 23 438 460 438 460 0.98

3 10 0.00086 0.04 14.8 1.6 1 23 466 488 466 488 0.98

4 10 3.2e-05 0.0015 19.3 2.8 1 23 494 516 494 516 0.99

5 10 0.00067 0.031 15.1 5.0 1 23 522 544 522 544 0.98

6 10 0.0017 0.078 13.8 2.1 2 23 551 572 550 572 0.97

7 10 7.6e-05 0.0035 18.1 4.4 1 23 578 600 578 600 0.98

8 10 6.8e-06 0.00032 21.4 2.5 1 23 606 628 606 628 0.99

9 10 0.00017 0.0077 17.0 1.5 1 23 634 655 634 655 0.99

10 10 7.2e-05 0.0033 18.2 1.3 1 23 661 683 661 683 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0004	0.019	15.8	3.7	1	21	410	430	410	432	0.96
2	10	4.2e-05	0.0019	18.9	2.7	1	23	438	460	438	460	0.98
3	10	0.00086	0.04	14.8	1.6	1	23	466	488	466	488	0.98
4	10	3.2e-05	0.0015	19.3	2.8	1	23	494	516	494	516	0.99
5	10	0.00067	0.031	15.1	5.0	1	23	522	544	522	544	0.98
6	10	0.0017	0.078	13.8	2.1	2	23	551	572	550	572	0.97
7	10	7.6e-05	0.0035	18.1	4.4	1	23	578	600	578	600	0.98
8	10	6.8e-06	0.00032	21.4	2.5	1	23	606	628	606	628	0.99
9	10	0.00017	0.0077	17.0	1.5	1	23	634	655	634	655	0.99
10	10	7.2e-05	0.0033	18.2	1.3	1	23	661	683	661	683	0.99

Sequence Information

Coding Sequence: ATGCAGATTTGCGTGATATGCCTCGATACTGATTGTAAGCTTTTACTGATGGGTGAACACAAATTGAAAGCAGCATATGAGAAGTTAACCGGATATCCTTTATGTGATCAAGGAAACATTAAGCAAACACTTTGCGAACGTTGTGCTCAGAAATTGACAGACTTTAGTAGATTTAGAGACGAGAGCTTAAGGGCCCGTGCCCTGATGATAAACTTGGTTGGAAAACACGAATTAATAACAGAAAGACATATAGAAATAATAAATCAGATGAAACAAAAACTAAAGAGTGATATGGTGTTGACAACACTAGAACCTGACCACTGTGACATACAGATACTGGAACATCCCTCCGAAGACCAACAGACAGAATTAGAGCAAACTGGACATGGAGTTGTGGTGAAATCTGAAGAATGTGATGACTCTGTGTTGGTTGATGAAAATATGAAAGTGATAAATGAAGGTGACAATAATGTCAATGATTTGGTTCAGGATCCCATAGAATATGGAGGTGTTCCCTTCCGATGTTCATTTTGTTTGGAAGAATTCGTTGATGAACATGACACGTCACATGTACACATTGTAAACATGCGGCATATGAGCATGAATCTCCAGAACGGTGATGGTGAATGTGAGACGTCGCAAGTACCTTTACAGCACGCAGACCCCAGCAATTCCGTACGCGCGGCTCAGACCTTACGCGCATCTTTGCCGTTAAGTCTTGCGACCGAAGATGCCGATGCAGACGACAGTTGCCGAAACAAAATATTAACTGATTGTTTTGTCAAATTACACGATGTTTTCTCTAAGAAAGTTGTGCCAAGACGAGATGGATCGCTGACGAAACAAGAAAAAGCTGTTAGGTCGTGCGACAGACAGAACATTAGGTTTAAAGATATCAGTTATCAAGCAACAAGTCAGAATGAAGTCCCTCCAATAGAATATGTTAAACCAGTCGCTGATGAAGGAAAAGTTACTATGTCAAAAACGGTGCACACTCTTCACATTGGGTCTAAAGATATCCGTTATCAAGCCACAAGTCAGAATGAAGTCCCTCCAATAGAACATGTTAAACCAGTCGCTGATGAAGAGAAAGTTACTGTGTCAAAAACTGTGTCCACTCTCCATAATGCATCTAAAGATATCCGTTATCATGCCACAAGTCAGACTGAAGTCCCTCCAATAGAATATGTCGCTGATGAAGAGAAAGTCACTGTGTCAAAACCAGTCTACAGGTGTGACTTTTGTCCAAACACATTTAAACAACAGAGTCTCCTAGTAAAACACATGCAGTGTCATGGAATAGACAATCGATTTGCTTGCAAGATTTGTCAATTCAAAACTAAATATAAAACCAATTTAACAGTGCACATGAGAACTCACACTGGTAAAAAGCCGTACTGTTGTAACTTATGCGATTATAAATCTGCACAAAGAGCTGATTTAGTGAAGCACACAAGAGTTCATACTGGTGAAAGGCCATATCGTTGTACAATATGCGAGAGTAAGTTTAGATTACCGAATCATTTGAAGATTCACATGAGAACTCACACTGGGGAACAGCCCTTCTCTTGCGACATATGCAAGCATACAAGTATACAAAAATGTGATTTAGTGAAACACATGCGAACTCACACTGGTGAAAAGCCCCTTTCTTGCAAGTACTGCAAGTATAAATGTGCAGAAAATAGTACTTTAGTGGTGCACGTGAGAACTCACACTGGTGAAAGGCCATATTCTTGCAGACTATGTGAGAAAAAGTTTATGACAGCATACCATTTAAAGAGGCACTTGAGTACTCATACTGGTGACAAGCCATATACTTGCACATATTGCAAGAATAAGTTCATATCAAATAGTTATTTATTGATACATATGAGAACGCACACTGGTGAAAAGCCTTTCAAATGCAAGTTATGTGACTACAGTAGTGTACAAAATAACCTAAAAGCCCACATGAGAACTCACACTGGTGAAAAGCCATTTACATGTGACATATGCCAATTTAAAACTGCACAAAAAACCAGTTTAGTAAGCCACATGAGAACACACCGCTAA
Protein Sequence: MQICVICLDTDCKLLLMGEHKLKAAYEKLTGYPLCDQGNIKQTLCERCAQKLTDFSRFRDESLRARALMINLVGKHELITERHIEIINQMKQKLKSDMVLTTLEPDHCDIQILEHPSEDQQTELEQTGHGVVVKSEECDDSVLVDENMKVINEGDNNVNDLVQDPIEYGGVPFRCSFCLEEFVDEHDTSHVHIVNMRHMSMNLQNGDGECETSQVPLQHADPSNSVRAAQTLRASLPLSLATEDADADDSCRNKILTDCFVKLHDVFSKKVVPRRDGSLTKQEKAVRSCDRQNIRFKDISYQATSQNEVPPIEYVKPVADEGKVTMSKTVHTLHIGSKDIRYQATSQNEVPPIEHVKPVADEEKVTVSKTVSTLHNASKDIRYHATSQTEVPPIEYVADEEKVTVSKPVYRCDFCPNTFKQQSLLVKHMQCHGIDNRFACKICQFKTKYKTNLTVHMRTHTGKKPYCCNLCDYKSAQRADLVKHTRVHTGERPYRCTICESKFRLPNHLKIHMRTHTGEQPFSCDICKHTSIQKCDLVKHMRTHTGEKPLSCKYCKYKCAENSTLVVHVRTHTGERPYSCRLCEKKFMTAYHLKRHLSTHTGDKPYTCTYCKNKFISNSYLLIHMRTHTGEKPFKCKLCDYSSVQNNLKAHMRTHTGEKPFTCDICQFKTAQKTSLVSHMRTHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -