Basic Information

Insect: Maniola jurtina
Gene Symbol: -
Assembly: GCA_905333055.1
Location: HG995235.1:6586520-6591250[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 7.5 3.5e+02 2.4 0.9 7 21 288 302 288 303 0.88

2 11 0.0095 0.44 11.5 0.3 8 23 485 500 478 500 0.87

3 11 2.7e-05 0.0012 19.5 4.1 1 23 506 528 506 528 0.99

4 11 1.3e-05 0.00062 20.4 4.1 1 23 534 556 534 556 0.98

5 11 0.00039 0.018 15.8 1.9 1 23 562 584 562 584 0.98

6 11 2.7e-05 0.0013 19.5 2.5 1 23 590 612 590 612 0.98

7 11 0.00032 0.015 16.1 3.3 1 23 618 640 618 640 0.98

8 11 0.001 0.048 14.5 2.4 1 23 646 668 646 668 0.98

9 11 0.00091 0.042 14.7 2.2 1 23 674 696 674 696 0.98

10 11 2e-05 0.00093 19.9 1.9 1 23 702 724 702 724 0.98

11 11 2e-05 0.00093 19.9 1.9 1 23 730 752 730 752 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	7.5	3.5e+02	2.4	0.9	7	21	288	302	288	303	0.88
2	11	0.0095	0.44	11.5	0.3	8	23	485	500	478	500	0.87
3	11	2.7e-05	0.0012	19.5	4.1	1	23	506	528	506	528	0.99
4	11	1.3e-05	0.00062	20.4	4.1	1	23	534	556	534	556	0.98
5	11	0.00039	0.018	15.8	1.9	1	23	562	584	562	584	0.98
6	11	2.7e-05	0.0013	19.5	2.5	1	23	590	612	590	612	0.98
7	11	0.00032	0.015	16.1	3.3	1	23	618	640	618	640	0.98
8	11	0.001	0.048	14.5	2.4	1	23	646	668	646	668	0.98
9	11	0.00091	0.042	14.7	2.2	1	23	674	696	674	696	0.98
10	11	2e-05	0.00093	19.9	1.9	1	23	702	724	702	724	0.98
11	11	2e-05	0.00093	19.9	1.9	1	23	730	752	730	752	0.98

Sequence Information

Coding Sequence: ATGCGGTGTTGTGTGCCTTTCTGCAAAAATACTTCGGCCAATGTATCACCATCAGAGGGAGAAGGGAAGGAGATTAGTTTTCATCGTTTCCCAAGTGAAGTGCATCTCCGCGCTGCTTGGCTCCGAGCCCTCGGCAAACAAGACAGTCTACCGGACTCTGCAGTGGTCTGCTCGCAGCATTTTCTAAATGATGACCTTTATGAAACAGAAAGTGGCTTAAGGCAAATTGGTGCTGGTGCTATTCCTTCAATGGTGCAGCAAAGCATGGAAACAGAACTGTACCTAGTTGTATATTTACAGGTTTGCACAATATGCCTTGACACTGACAGTAAGCTGTTTCTAATGAAGAAATATAACTTGGATGAAGCATATGAAAAGTTAACTGGACATCCCTTGTGTGAGCAAGGAAACCTAAAACAAACACTTTGTGTGCAATGTGCTCAGAGATTACTAAACTTTAGCAGATTTAGAGACAAGAGCTTGAGAGCCCGTGCACTGATGATGGACTTAGTTGAAAAACATGAATTAATAACAAAGCGACATATCAAAATGATAAGCCGCACAAAACACCAACTAGAGAGTAGTATGGGGTTGACAACGCTAGGACCCGACCACTGTGACTTATACATAGTAGAACACCCCTCGGAAGACGAACAAACTGAATTAGAGGAGACAGACCACCAAGTTCTAGTGAAAACTGAAGGAAGTGATGACTCTATGTCGGTTGATGAGGACTCAGAAGTGGTGAATGAAGATGACAATAATGCAGTAACTGTTGAAGATGAGTTTGCAACTTCTAATGAGGAAGACATATCTGACTATAGCATTATGTTGGAAGCAAAATCACTGGATGAAGCTCTTCACAAAGCTCTCAAGACGAAACATTCATACACGCGACATATGAGTGTAAAGCTCGAGAACGGTGATGGTGATGGTGAATGTGAGACGTCACAAGTATGCAAGCCTCATACAGCTGTGAGCTCTAGCTGCTCACACTCTTCACTCATCACTGAGAACAAGCGGGCAGACTCCAGCCCTTCTGCACATTCTGCCCAACCCTTTGTCGCTCCGCTGCCTGCGAGTCTAACGACAAGTAACGAAGTAAAAGTGTCCCCACCTGAAGTAGCCGATACAAACTTCAGATTAACAGATTGTTTTGTCAAACTGTATGATATTTTCTCCAAGAAAGTCGTACCTAGACAACACAGAAAGGCTGTTAGGTCTTGTGTCAGTCAGAACATTGTGTCCAAAGATATCAGTTATCAGGCAACAAGTAAGAATGAAGTCTCTACGACAGAATATGTTGAACCAGTCACTAATTCTGTACAAGAAGTTGTATCGAAAACTGTACAAAGCAAAACTGATTGTTTAAAGAATGTCATTAATGTACAATGTTCATTACAAACTAGTTCACACACTGAGGATAGTCGGTTCATTTGTGATATTAGTCGAAAAGCGTTTAAACGAAAAAGTCTCTTAGTAAAACACATAACGACTCACGCTGAAGTAACACAGTTCACTTGCAAGATTTGCCAGTACGATTGTAAGTATCCAAGCTATCTGAAGATACACATGCGAACTCACACTGGCGAAAAGCCATTTCCTTGCAAGTTATGCAATTACAAATGTGCACGAAATAGCCATCTAGTGGCGCACATGAGAACCCACTCTGGTATAAAACCTTTCTCGTGTCAATTATGCAACTACAAAAGTGCACAAAAGAGCCGTCTGGTGACGCACATGAGAACCCACTCTGGTATAAAACCTTTCTCGTGTCAATTATGCAACTACAAAAGTGCACAAAAGAGCCATCTAGTGGCGCACATGAGAACCCACTCTGGTATAAAACCTTTCTCATGTCAGTTATGCAAATACAAATGTGCACAAAATAGCAGTCTAGTGGAGCACATGAAAACCCACTCTGGTATAAAACCTTTCTCGTGTCAATCATGCAACTACAAAAGTGCACGAAAGAGCCGTCTGGTGACGCACATGAGAACTCACACTGGTATAAAACCTTTCTCATGTCAGTTATGCAATTACAAATGTGCAGAAAACGGCACTCTAGTGACGCACATGAGAACCCACACTGGTATAAAACCTTTCATGTGTAATTTATGCAATTACAAATCTTCATACAATAGCAATCTAGTGAGCCACATGAGAACACACACTGGTATAAAACCTTTCATGTGTAATTTATGCAATTACAAATCTTCATACAATAGCAATCTAGTGAGCCACATGAGAACTCACACTGGTACAAAACCTTTGCACTTTTGA
Protein Sequence: MRCCVPFCKNTSANVSPSEGEGKEISFHRFPSEVHLRAAWLRALGKQDSLPDSAVVCSQHFLNDDLYETESGLRQIGAGAIPSMVQQSMETELYLVVYLQVCTICLDTDSKLFLMKKYNLDEAYEKLTGHPLCEQGNLKQTLCVQCAQRLLNFSRFRDKSLRARALMMDLVEKHELITKRHIKMISRTKHQLESSMGLTTLGPDHCDLYIVEHPSEDEQTELEETDHQVLVKTEGSDDSMSVDEDSEVVNEDDNNAVTVEDEFATSNEEDISDYSIMLEAKSLDEALHKALKTKHSYTRHMSVKLENGDGDGECETSQVCKPHTAVSSSCSHSSLITENKRADSSPSAHSAQPFVAPLPASLTTSNEVKVSPPEVADTNFRLTDCFVKLYDIFSKKVVPRQHRKAVRSCVSQNIVSKDISYQATSKNEVSTTEYVEPVTNSVQEVVSKTVQSKTDCLKNVINVQCSLQTSSHTEDSRFICDISRKAFKRKSLLVKHITTHAEVTQFTCKICQYDCKYPSYLKIHMRTHTGEKPFPCKLCNYKCARNSHLVAHMRTHSGIKPFSCQLCNYKSAQKSRLVTHMRTHSGIKPFSCQLCNYKSAQKSHLVAHMRTHSGIKPFSCQLCKYKCAQNSSLVEHMKTHSGIKPFSCQSCNYKSARKSRLVTHMRTHTGIKPFSCQLCNYKCAENGTLVTHMRTHTGIKPFMCNLCNYKSSYNSNLVSHMRTHTGIKPFMCNLCNYKSSYNSNLVSHMRTHTGTKPLHF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00954581;
90% Identity: iTF_00954581;
80% Identity: iTF_00954581;