Mjur006560.1
Basic Information
- Insect
- Maniola jurtina
- Gene Symbol
- ZFX
- Assembly
- GCA_905333055.1
- Location
- HG995233.1:6910663-6917068[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.0019 0.088 13.7 0.3 2 21 139 158 138 159 0.94 2 17 0.00035 0.016 16.0 0.9 1 23 190 212 190 212 0.93 3 17 0.0044 0.2 12.5 2.0 2 23 218 239 218 239 0.95 4 17 4.7 2.1e+02 3.0 3.7 1 20 242 261 242 263 0.90 5 17 2.4e-05 0.0011 19.7 1.6 1 23 277 300 277 300 0.95 6 17 0.079 3.6 8.6 4.1 1 23 306 328 306 328 0.95 7 17 2.2 1e+02 4.1 0.3 1 23 362 385 362 385 0.88 8 17 2e-05 0.00093 19.9 1.0 1 23 392 415 392 415 0.96 9 17 0.0028 0.13 13.2 0.8 2 21 524 543 523 544 0.93 10 17 0.035 1.6 9.7 2.2 1 23 577 600 577 600 0.95 11 17 4.4e-05 0.002 18.8 1.0 2 23 606 627 605 627 0.96 12 17 0.23 10 7.1 1.6 2 20 631 649 631 651 0.92 13 17 9.4e-05 0.0044 17.8 2.0 1 23 677 700 677 700 0.95 14 17 0.00046 0.021 15.6 0.5 1 23 706 728 706 728 0.95 15 17 0.1 4.8 8.2 0.1 1 23 734 756 734 756 0.97 16 17 0.0045 0.21 12.5 0.8 1 23 762 785 762 785 0.94 17 17 0.00054 0.025 15.4 1.6 2 23 792 814 791 814 0.96
Sequence Information
- Coding Sequence
- ATGTTGGAAAAATACCCGAGTACGCAACCCTCAGTGCGCGAGTTTGACTCGCACTTGGCCGGTTTTATCTTTGCCGTCTTTGCGGAGACCGACCTGCCCGGAGGCCTATGCAGCGACTGCACCAACAGTACACTGTTAGCGTGGAAGTTCAGGTTGCTATGCATCAGCTCTGATCAAGAATGGAGTCGAGTGACCGAAGTCCTGACTCAAAACACAGAAAATCTGTCTGCCAACCCAGATGACACAGTCCTTTACATATGCTCAACAAAAGAGGGCGCAGTTTTCAAAGACCATATCCCCAAAATATATACCTTAACAGAAGCTGCCGATAATCTCAATGATATCCTCAAAACGGATAGGAAACGGGAACGGGAGAAAGTAAAAAATAAAGTGTCGAAACGTCGCCTCAAAATCAAATGCCGGATGTGTGGTAAAGTGTTCCATCTTCCCGAATATTTGAACCAGCATTTGATGAGCTCATCCAAAGGCGCTTGCATCGTTTGCGCCAAGGTGCTGCCAAAGGTAAAGTTGCCAAATCATTTGGAAAACGTTCACGGGATGTGTGTTTACGCTTGCAAAATTTGTCACCAAATGTTCGACGACCAATCGAATTTGGACAGTCATAGCGAACTCCACGGATTGAATTCGCCGCAATGCAGGATTTGCAAGCAAGGTTTCAAAAACGAGAGATCTTTACACGCTCACATGTTCGCCCACACGCTATTTACCTGCATAAATTGTGGCAAAGGCTTTGAGAACCGAAGATGCTACACTTATCACAAAGAACATTGTACAGCCACCAAACCCTACACCGAAGTTGAAGGGACATATGAATGCCACGATTGCGGTCGAAAGTATTCAAAGAAACCGTCGCTAAGAATCCATATAATACAGAAGCATTTGAATGTTTTACCATTCGTTTGTCAGATATGTGGGAAGCGCAGTTCCACGAAAAACCATCACAAGTCCCATGAACTTATTCATAAAACAGAACGGAAGATATACCAGTGCGAGTGTGGTGCGAAAATGCGTACCGCTCTCGGTTTTCACATGCACCAAAGAATCCATTCTGGGGAAAAGCCGTACGAATGTGAGGAATGCGGGGACAGGTTTCTATCTGCTTCTAGAAGGTTGGACCACATCAAAAGGAGGCATAGGGGCGGTACCACACCACATAATTGTGACAAATGTGGTGCAGGTTTCATCAGGCCATTTGAACTGAAAAAGCATTATCGCACTGCACATTTTGTGAGAGAAGAAGAGCCACTGTTTCCTCAACTATTGTGTGTAACCTGTACCCACGTCGCCACAACAGCATACGAATTCCGCCTATTCGCGAGCCATTCACAAAATCTATGGGCCAATTGCGTTGCCTCCATAGGAAGCCTATTCCCATTGAAGACCCCGAAGTCATTTTACGCGATCATAAAAGACAATTTACTCCTCCAAAGTGTTAACAATTTTGAGGGTAGTACCAAAGAATTGGCGCACCATTTGTCTAACCGTTTTAAAAAGAAACCGGTGACCCCAGAACGGAAATCTAGACACCCTCGTACAGGGCCTTCCTGTGATTGTACGGATTGTGGAAAAAGCTTTTTAAGCCCCTACTTCCTTAACGTCCACCTTCGTAACAGCGGTCAGAAGGAAGCGTGCTGGTTATGTGGCACCATGCTCATACGCGGTCTACAAATGAAGGAGCACCTATCAGAAACGCATAAAACGGATATGTTTCTATGCTCAGAATGCCCGTTGCTTTTCAAAACTGAATCAGAAGCGAGGCAGCATCAGAAAAAGTGTCATGGACCTGGGAAATTAACTTGCAATGATTGCGGACGGACTTTTAAAAGGAAGGCGTCGTTTGACGTGCATTCTCAGATGCATAATGTTAGGACTTGTCGAACTTGTGGGGTCCAATTTACTAATCGAGGTTGCTATAGAGAGCATAGAGCGAAATGCGAACCGGATGCTAAGCCCGACTTGAAAACCGTGCCTCGCAGCCGCCGATCGAACATCCGGGACCCAGCCACGTTTACCTGTGACTATTGTAATAAAACCTATCATTCACGACCTCAGTTAAAGAATCATATTTTATGGATTCACCTGGACATACGGCCGCATCAATGTCAATGGTGTGGCAAACGGTTTTATACCCCAGCGCGATTGGCGGAACACACAGTCGTACATACAAGGGAAAGAAATTTTGAATGTGATATCTGTGGTGCTAAATTAGTTTCCAAAATGGCGGCGGTGTACCATAGACGACGGCATACGGGGGAAAAACCGTACGAATGTTCGGATTGCGGGGAGAAATTCATTTCTTCGTCCAGGAGGTCCGAGCATGCTAAGCGTAGACACAATAAGGGACCTCGGTTACAGTGTACCCTATGCGTTTCCAGTTTTGTCAGGAGCCATGAGCTAAAGAAGCACATGGAAAAGGCACATAACCCTGATTCACAGAATCTGCTCAAAGTTAAGAAGGTTAAAGAGTTAGTTGAAACTATTGCATGA
- Protein Sequence
- MLEKYPSTQPSVREFDSHLAGFIFAVFAETDLPGGLCSDCTNSTLLAWKFRLLCISSDQEWSRVTEVLTQNTENLSANPDDTVLYICSTKEGAVFKDHIPKIYTLTEAADNLNDILKTDRKREREKVKNKVSKRRLKIKCRMCGKVFHLPEYLNQHLMSSSKGACIVCAKVLPKVKLPNHLENVHGMCVYACKICHQMFDDQSNLDSHSELHGLNSPQCRICKQGFKNERSLHAHMFAHTLFTCINCGKGFENRRCYTYHKEHCTATKPYTEVEGTYECHDCGRKYSKKPSLRIHIIQKHLNVLPFVCQICGKRSSTKNHHKSHELIHKTERKIYQCECGAKMRTALGFHMHQRIHSGEKPYECEECGDRFLSASRRLDHIKRRHRGGTTPHNCDKCGAGFIRPFELKKHYRTAHFVREEEPLFPQLLCVTCTHVATTAYEFRLFASHSQNLWANCVASIGSLFPLKTPKSFYAIIKDNLLLQSVNNFEGSTKELAHHLSNRFKKKPVTPERKSRHPRTGPSCDCTDCGKSFLSPYFLNVHLRNSGQKEACWLCGTMLIRGLQMKEHLSETHKTDMFLCSECPLLFKTESEARQHQKKCHGPGKLTCNDCGRTFKRKASFDVHSQMHNVRTCRTCGVQFTNRGCYREHRAKCEPDAKPDLKTVPRSRRSNIRDPATFTCDYCNKTYHSRPQLKNHILWIHLDIRPHQCQWCGKRFYTPARLAEHTVVHTRERNFECDICGAKLVSKMAAVYHRRRHTGEKPYECSDCGEKFISSSRRSEHAKRRHNKGPRLQCTLCVSSFVRSHELKKHMEKAHNPDSQNLLKVKKVKELVETIA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -