Basic Information

Insect: Maniola jurtina
Gene Symbol: -
Assembly: GCA_905333055.1
Location: HG995236.1:5026136-5036739[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0041 0.19 12.6 0.6 1 23 220 242 220 242 0.98

2 11 0.0014 0.065 14.1 1.9 1 23 249 271 249 271 0.99

3 11 3.3 1.5e+02 3.5 0.5 1 9 275 283 275 298 0.73

4 11 0.00083 0.038 14.8 2.8 1 23 305 327 305 327 0.98

5 11 4.4e-06 0.0002 22.0 2.7 2 23 334 355 333 355 0.97

6 11 2.8e-05 0.0013 19.4 1.2 1 23 361 384 361 384 0.97

7 11 1.7e-05 0.00078 20.1 0.9 1 22 389 410 389 414 0.93

8 11 0.0043 0.2 12.6 0.1 1 19 422 440 422 440 0.97

9 11 9.4e-05 0.0044 17.8 0.0 2 23 452 474 451 474 0.96

10 11 1.8e-07 8.4e-06 26.3 0.4 2 23 483 504 482 504 0.97

11 11 0.021 0.98 10.4 0.2 5 23 513 531 510 532 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0041	0.19	12.6	0.6	1	23	220	242	220	242	0.98
2	11	0.0014	0.065	14.1	1.9	1	23	249	271	249	271	0.99
3	11	3.3	1.5e+02	3.5	0.5	1	9	275	283	275	298	0.73
4	11	0.00083	0.038	14.8	2.8	1	23	305	327	305	327	0.98
5	11	4.4e-06	0.0002	22.0	2.7	2	23	334	355	333	355	0.97
6	11	2.8e-05	0.0013	19.4	1.2	1	23	361	384	361	384	0.97
7	11	1.7e-05	0.00078	20.1	0.9	1	22	389	410	389	414	0.93
8	11	0.0043	0.2	12.6	0.1	1	19	422	440	422	440	0.97
9	11	9.4e-05	0.0044	17.8	0.0	2	23	452	474	451	474	0.96
10	11	1.8e-07	8.4e-06	26.3	0.4	2	23	483	504	482	504	0.97
11	11	0.021	0.98	10.4	0.2	5	23	513	531	510	532	0.92

Sequence Information

Coding Sequence: ATGGAAGGCATATGCCAAACTTGCCTCGTAAATGGTGTCCCTATAAAACCCATGTCCGTTGAAGAAATGGAGTGTTATAGAACATTTGTTTTAATGGTTTTAAAGATAGAAGATCCACTAGATATGATATACGTCTGTGTGTACTGTGAAGGTGTTTTAAAAAAGATTAATAAATTTATCAGGCAATGTCGGCTTGCAGATCAAGTTCTTAAAAACTTTTGCAAGAGTAACTTAGAGACACTCAAGAAAATTAACTCTAGTCATTTATCAACATCCAAAATTATTTGTCATTATATTGGACCAGAAATTGTAAAATCTAAAAGTGATGACAAGATATCTGATGATGATGATGATATTCCGTTGGCAATGCTCAGTCAGAATAGTGATGATCACGAGTACAATTGTGACAATCATGAAGACTTGATAAATGACAATGTAGATACAAGCATAGACAATACAGAACAGGAAAAAAACACACAGACGGATATAAAGAGCAAACACAAGAAATTTAGAAAGAAAAAGAAAGAAGCAAGACAAGGGTTCTCTTCTAGAATGGTTGTGGAAACTGATGAATATAAAGTCATTAAACTGACTAAGGAAGAGATTATAGAAGAAATGAGACAGCATGCAGAAAATGAAAAGTACAAGGTATTACCCTATAAATGTGACAAATGTGTCCGAGGATTCAATTTCGAGGATGTACTACAGAGTCATTTGGAGAAACATTCACTAAAAAATGGCCCTTTTCAATGCGAAATATGCACACAGTATTGTCCCAGCAGAGTTTCTTTAAGAGGCCATATGAAGTCACATTCTACTAGATATAAGTGCAAGCTATGCGGTATAGTCCGCCTGTCGCGTCAACACATTCTGGAGCACTACTCGCTCCAGCACATGGCTTCGCCCGCTTTGTACACCTGCCCCAAATGTGACCACACTACCAACAAAAGAACAGCAATGCAAAGGCATGTGAGACTTCACTCTGCGAGTAAACCACTCAAATGTCACTATTGCGGGAAATACTACAAAACCAAGGAGTCACTCCGGATACATATTATAAGACATGACGACAAAAAGCTGCATCAATGTGAAATATGCACCAGTACTTTTGTATATGCGGGACAACTGACCAAGCATATGAAGTCTGTGCATGTCTTAAAGGACTATTACTGTGTGGAATGCGACATCATGTTCAAATCAAAGGATAACCTCAAACAACACTTGCAACGAGCGAAACGTCATAGAGACGATTCTTCATACAAATTCCCCTGCACCCAATGCCCACAAAAGTTCATATCCGCGTCGACGCTCGCGACGCACGACACTCACGCGCACGGTGCCGCTAAGAGTGTACCGTGCTCACTCTGCCCGCGCGTGTACAGCAGCGCTGACGGGCTGCGCTGGCACACGCGCAGGGCGCACACTGCCCTCGACAAGTCCAAGTTACCATGCCCACTGTGCGATAGGACGTTTTCGCGTAAGTACGTGCTCCGTGTTCACATGCGCACGCACACAGGCGAACGTCCGCACGTGTGTGAGTGTGGAGCCGCGTTCGCCCAGCCGGCGGCTTTGCGCGCGCATCGCGCACAGCACCACAAGAAACCAACTGTCATTGCAGAAAATGAGACATGA
Protein Sequence: MEGICQTCLVNGVPIKPMSVEEMECYRTFVLMVLKIEDPLDMIYVCVYCEGVLKKINKFIRQCRLADQVLKNFCKSNLETLKKINSSHLSTSKIICHYIGPEIVKSKSDDKISDDDDDIPLAMLSQNSDDHEYNCDNHEDLINDNVDTSIDNTEQEKNTQTDIKSKHKKFRKKKKEARQGFSSRMVVETDEYKVIKLTKEEIIEEMRQHAENEKYKVLPYKCDKCVRGFNFEDVLQSHLEKHSLKNGPFQCEICTQYCPSRVSLRGHMKSHSTRYKCKLCGIVRLSRQHILEHYSLQHMASPALYTCPKCDHTTNKRTAMQRHVRLHSASKPLKCHYCGKYYKTKESLRIHIIRHDDKKLHQCEICTSTFVYAGQLTKHMKSVHVLKDYYCVECDIMFKSKDNLKQHLQRAKRHRDDSSYKFPCTQCPQKFISASTLATHDTHAHGAAKSVPCSLCPRVYSSADGLRWHTRRAHTALDKSKLPCPLCDRTFSRKYVLRVHMRTHTGERPHVCECGAAFAQPAALRAHRAQHHKKPTVIAENET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -