Basic Information

Insect: Maniola jurtina
Gene Symbol: -
Assembly: GCA_905333055.1
Location: HG995233.1:2731702-2738957[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1e-06 4.7e-05 24.0 2.1 1 23 497 519 497 519 0.99

2 10 0.0012 0.055 14.3 6.4 1 23 525 547 525 547 0.98

3 10 2.6e-05 0.0012 19.5 4.6 1 23 553 575 553 575 0.98

4 10 4.6e-05 0.0021 18.8 5.3 1 23 581 603 581 603 0.98

5 10 4.6e-05 0.0021 18.8 5.3 1 23 609 631 609 631 0.98

6 10 1.9e-05 0.00087 20.0 1.7 1 23 637 659 637 659 0.98

7 10 3.6e-05 0.0017 19.1 2.4 1 23 665 687 665 687 0.98

8 10 0.00014 0.0067 17.2 7.6 1 23 693 715 693 715 0.99

9 10 3.5e-05 0.0016 19.2 1.3 1 23 721 743 721 743 0.98

10 10 0.0001 0.0048 17.6 5.0 1 23 749 771 749 771 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1e-06	4.7e-05	24.0	2.1	1	23	497	519	497	519	0.99
2	10	0.0012	0.055	14.3	6.4	1	23	525	547	525	547	0.98
3	10	2.6e-05	0.0012	19.5	4.6	1	23	553	575	553	575	0.98
4	10	4.6e-05	0.0021	18.8	5.3	1	23	581	603	581	603	0.98
5	10	4.6e-05	0.0021	18.8	5.3	1	23	609	631	609	631	0.98
6	10	1.9e-05	0.00087	20.0	1.7	1	23	637	659	637	659	0.98
7	10	3.6e-05	0.0017	19.1	2.4	1	23	665	687	665	687	0.98
8	10	0.00014	0.0067	17.2	7.6	1	23	693	715	693	715	0.99
9	10	3.5e-05	0.0016	19.2	1.3	1	23	721	743	721	743	0.98
10	10	0.0001	0.0048	17.6	5.0	1	23	749	771	749	771	0.98

Sequence Information

Coding Sequence: ATGCGGTGTTTTGTGCCTTTCTGCAAAAATACATCGGAAAATGTATCGGAAGGAGATGGGCCGAGGATTAGTTTTCATGGTTTCCCCAGCGAAGTGCATCGCCGTGCTGCGTGGCTCCGAGCCCTCGGCAAACAGGACAGTCACCTACCAGACTCCGCTGTGGTCTGCTCGCAGCATTTTCTGTGTGATGACATTCATGAAACAGAAGGTGGCTTGAGGCAAATAGATATCAGCGCTATGCCTTCCACAGTGCAGGTTTGCATGATATGCCTAGACACTGACAGCAAGCTGTTCCTAATGGGTAAACACAAATTGCAAGAAGCATATGAAAAGTTAACTGGACATCGTTTGTGTGATCTAGCGAACCTAAAACAAACACTTTGTGTACAATGTGCTCACAGTCTGATAAAATTTAATAGATTTAGAGACAAAAGCCTGAGAGCCCGTGCACTGATGATGGACTTAGTTGAAAAACATGAATTGATAACAAGACAACATGTAGAAATGATAAACCGGTCAAAACACCAACTAAAGAGTAACATGGTGTTGACAACACTAGGACCTGACCACTGCGACTTACACATACTAGAACACCCCCCAGAAGACAAACAGGCAGAAAAAGAGGAATCTGAACACATGTTTGTTGTGAAAACTGAAGAAACTGATGACTCTATGTCGGTTGATGAAGACACGGAAGTGATGTATGAAGATGATGAAAATGTCGATGATTTTGTTCCGGATCCATTAAAGTACGAAAGTGCTCCTTTCCAATGTACACTTTGTTTGGAAGAATTCCTCCTTGAACATGCATACATGCAACATGTGAGCATGCATCTCCAGAGTACCTCTCAAACTCTCGAAGAACAAAAATGTCAAGAATTAGTTTTGTTTTGGCAGAATGGCGATGGTGATGGGGAATATGACACATCACGAGTGTGCGAGCCTCGTACAGCTGAGAGCTGTAGCGCGTCACGCTCTTCACTCCTCACTGAGAACAAGGATATTCTGATATTCCACAGGGCGGCAGACCCCAGCACTTGCACACACGCTGCGCTCGCCGCAGTAACTGCCTTGTCGACGAGTGTTGCGACAAATGACGAGAAAAAAGTCCACGCGACTGAAGAAGCCGATATATTCCAGAAAACCAATGACAATGGTGAATTTGAAAACCAATCATCTAGTAAAATGAGCGTAAACATTAATACATTCAAAAATTGTGTAGTCAAGTTATATGATATTTTCACAAATATGAAAGTTGTTACGAAACATGATGGACCGGTGACGAAAACACGAATAACTGATATGGTTTGTGACAGTCGGGATATTGCGTCTAAAGATTCCAGTTATCGGGCAACAAGTCAGAACGAAGTCCTTCCGACAGAATACATTGTACCAGTCACTAGTAGTAGTACTAGTCTGAGTAATGTCATTAATCCAGTACAATGTATTAATTCATCACAAAATAGTTTACACACTGAGGAAGGGTCGTTCACTTGTGACATTTGTCGTAAAACTTATAATAGAAAAAGTCTCTTAGTTAAACATATAAAGACTCACTCTGAAGTAAGAGGGTTCACTTGCAAGACTTGTCAATACAAATGTAAATATCAATATCTTTTGACAAGACACATGGTAACTCACACTGGTATAAAACCTTTCTCGTGTGACTTATGCGATTATAAATGTGCTCGAAATAGCCATCTAGTGTCGCACATGAGAACTCACACGGGTATAAAACCATTCTCGTGTAAGCTATGCGATTACAAATCTGCACATAACAGCCATCTAGTGAGGCACATGAGAACTCACACGGGTATAAAACCATTCTCGTGTAAGTTATGCGACTATAAATCTGCACATAATAGCCATCTAGTGAGGCACATGAGAACTCACTCGGGTATAAAACCATTCTCGTGTAAGTTATGCGATTATAAATCTGCACAAAATAGCACTCTAATGCAGCACATGAGAACTCACACGGGTATAAAACCATTCTCGTGTAATTTATGCAATTACAAATGTGCACGAAATGGCGATCTAGTGACGCACATGAGAACTCACTCGGGTAGAAAACCATACTCGTGTAAGTTATGCGATTATAAATGTGCACATAATAGCCATCTAGTGACGCACATGAGAACTCACTCGGGTATAAAACCATTCTCGTGTAAGTTATGCGATTATAAATCTGCACAAAATAGCACTCTAATGCTGCACATGAGAACTCACACGGGTATAAAACCATTCTCGTGTAATTTATGCAATTACAAATGTGCACGAAATGGCCATCTAGTGACGCACATGAGAACTCACTCGGGTATCTTGTAG
Protein Sequence: MRCFVPFCKNTSENVSEGDGPRISFHGFPSEVHRRAAWLRALGKQDSHLPDSAVVCSQHFLCDDIHETEGGLRQIDISAMPSTVQVCMICLDTDSKLFLMGKHKLQEAYEKLTGHRLCDLANLKQTLCVQCAHSLIKFNRFRDKSLRARALMMDLVEKHELITRQHVEMINRSKHQLKSNMVLTTLGPDHCDLHILEHPPEDKQAEKEESEHMFVVKTEETDDSMSVDEDTEVMYEDDENVDDFVPDPLKYESAPFQCTLCLEEFLLEHAYMQHVSMHLQSTSQTLEEQKCQELVLFWQNGDGDGEYDTSRVCEPRTAESCSASRSSLLTENKDILIFHRAADPSTCTHAALAAVTALSTSVATNDEKKVHATEEADIFQKTNDNGEFENQSSSKMSVNINTFKNCVVKLYDIFTNMKVVTKHDGPVTKTRITDMVCDSRDIASKDSSYRATSQNEVLPTEYIVPVTSSSTSLSNVINPVQCINSSQNSLHTEEGSFTCDICRKTYNRKSLLVKHIKTHSEVRGFTCKTCQYKCKYQYLLTRHMVTHTGIKPFSCDLCDYKCARNSHLVSHMRTHTGIKPFSCKLCDYKSAHNSHLVRHMRTHTGIKPFSCKLCDYKSAHNSHLVRHMRTHSGIKPFSCKLCDYKSAQNSTLMQHMRTHTGIKPFSCNLCNYKCARNGDLVTHMRTHSGRKPYSCKLCDYKCAHNSHLVTHMRTHSGIKPFSCKLCDYKSAQNSTLMLHMRTHTGIKPFSCNLCNYKCARNGHLVTHMRTHSGIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00954623;
90% Identity: iTF_00954622;
80% Identity: iTF_00954622;