Mjur011280.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Maniola jurtina
Gene Symbol
-
Assembly
GCA_905333055.1
Location
HG995232.1:148084-153045[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.18 8.4 7.4 1.4 2 23 262 283 261 283 0.96
2 14 4.9e-06 0.00023 21.8 0.9 1 23 403 425 403 425 0.98
3 14 0.00036 0.017 15.9 1.4 1 23 431 453 431 453 0.99
4 14 0.00016 0.0076 17.0 2.2 1 23 459 481 459 481 0.98
5 14 0.00013 0.0061 17.3 3.9 1 23 487 509 487 509 0.99
6 14 3.2e-05 0.0015 19.2 3.9 1 23 515 537 515 537 0.99
7 14 0.0031 0.14 13.0 6.0 1 23 543 565 543 565 0.98
8 14 0.00011 0.0052 17.5 1.9 1 23 571 593 571 593 0.98
9 14 0.0096 0.44 11.5 3.6 1 23 599 621 599 621 0.98
10 14 0.00095 0.044 14.6 2.8 1 23 627 649 627 649 0.98
11 14 1.4e-05 0.00064 20.4 3.6 1 23 655 677 655 677 0.98
12 14 0.00058 0.027 15.3 3.9 1 23 683 705 683 705 0.98
13 14 0.00058 0.027 15.3 3.9 1 23 711 733 711 733 0.98
14 14 0.003 0.14 13.0 3.9 1 23 739 761 739 761 0.98

Sequence Information

Coding Sequence
ATGCAATGTTGTGTGCCTTTCTGCAAAAATACTTCGGACAATGTGTCCTCATCACACGGGGAGGGGAAGGCGATTAGCTTTCATGGTTTCCCCAGTGAAGTGCATCTCCGTGCTGAGTGGCTCCGAGCCCTCGGCAAGCAAGACACTCAGCCACCAGACTCTGCTGTGGTCTGCTCGCAGCATTTCCTGAATGACGACATTTATGAAACAGAAAGTGGCGTAAGGCAAATTAGTACTGGTGCTATTCCTGTAACAGTGCAGGTTTGCATGATCTGCCTAGACACTGACAGCAAGCTGTTCCTACTGAGCCAACTCAAACTGGAAGGAGCATATGAGAAGTTAACGGGACATGCTTTGTGTGCTCAAGGAAACCTGAAACAAACACTTTGCATACAATGTGCTCAGAGATTGATAAGCTTTAGTAGATTCAGAGACAAGAGCTTGAGAGCGCGTGCACTGATGATGGACTTAGTTGACAAACATGAATTAATAACAAGACAACATATACAAATGATAAACCGCACAAAACTCCAACTGAAGAGTGATTTGGTGTTGACAACACTAGGACCTGACCACTGTGACTTACACATACTGGAACACCCCTCGGAAGACAAACAGACAGAATTAGAGGAAACTGGACTCAGAGTTGCAGTGAAAGCTGAAGGAAGTGGGGATGATGAAGAGACTATGTGTGTTGATGAAGATATGGCAATGAAGAGTGAAGATGACAGGGATATCCAGGGTTTTGTTCGGGATCCGTTAGAATACGAAGGTTGTCCCTTGCAATGTACACTTTGTTTGGAGGAATTTGTCCATGAACATGCATACATGCAACATGTGAGCATGCATCTCTGGAGCGGCGAGGCTGAGGCTGAGGGCGAGGCTGAGGGACAATGCGGCACGTCACAGCGCGAGGCACACTCGTGGCGCGTCGCCGAGAGCAGGCGCGCCTGCGCACGCGCCGCGAGCGACGAGCGCAGTGAGCCGGCCACCGCGGAAGCCGATACAGGCCACAGCTGCGGGCACAGAGGACTAACAGATTGTTTTGTCAAACTGTACGACATCTTCCCGAGACGAGACGGCTCGCCGACGATGACACAGGAAGCTGTTACACATATCAGTCATCGGGCGGCGAGTCCGAATGGAGGCCCCACTACGGAATATGCAGTCCCCGGTGAAGAGAAGCTTACCGTGTCACAACCTGCGTACATTTGTGACTCTTGTCAAAGAGTGTTCAAACGAAAAAGTCTGCTAGCAAAACACGTTCAGACTCACGCGCCACTGAATACATTTACTTGCAAGATTTGCCAATACGAAGCTAACGATACAAATCATTTAATTGTGCACATGAGAACTCACACTGGTGATCAACCATTTAGTTGTGAATTATGTAAATATGAATGTAACGGAAATAGTGATTTAGTTAAGCACATGAGAACTCACACTGGTGAAAAACCATATCGTTGTAAATTATGTGCATATAAATGTAACCGAAGTAATGATTTAGCGAGGCACATGAGAACTCACACTGGTGAAAAACCATATCGTTGTAAATTATGCAAATATAAATGTAAACGAAGTGATGCTTTAGTGGTGCACATGAGAACTCACACTGGTGAAAAACCATATTGTTGTGAATTATGCAAGAGTAAGTTCGTATCAAAATGTAATTTAGTGTTGCACATGAGAACTCACACTGGTGAAAAACCATATTTTTGTGAGTTATGCAAGAGTAAGTTCGTATCAAAACGTAATTTAGTGTTGCACATGAGAACTCACACTGGTGAAAAACCATTTTGTTGTGAGTTATGCAAGAGTAAGTTCATATCAAAACGTAATATAGTGTTGCACATGAGAACTCACACTGGTGAAAAACCATTTTGTTGTAAATTATGCAACTATAAAAGCTCCCAAAAGAGTCCGTTAGTGGTGCACATAAGAACTCACACTGGTGAAAAACCATTTAGTTGTGAAATATGTAAATATAAATGTAACCGAAATAGTGATTTAGTTCAGCACATGAGAACTCACACTGGTGAAAAACCATTTTGTTGTGAGTTATGCAAGAGTAAGTTCATATCAAAACGTAATTTAGTGTTGCACATGAGAACTCACACTGCTGAAAAACCATTTTGTTGTGAGTTATGCAAGAGTAAGTTCATATCAAAACGTAATTTAGTGTTGCACATGAGAACTCACACTGGTGAAAAACCATATTGTTGTGAGTTATGCAACTATAAAAGCTCCCAAAAGAGGCGATTAGTGGTGCACATGAGAACTCACACTGGTGAAAAACCATATTGTTGTAAATTATGCGAATATAAAAGCTCCCAAAAGATTCACGATTCTGTACTTATACTATGCTATACTAGCGTGTAG
Protein Sequence
MQCCVPFCKNTSDNVSSSHGEGKAISFHGFPSEVHLRAEWLRALGKQDTQPPDSAVVCSQHFLNDDIYETESGVRQISTGAIPVTVQVCMICLDTDSKLFLLSQLKLEGAYEKLTGHALCAQGNLKQTLCIQCAQRLISFSRFRDKSLRARALMMDLVDKHELITRQHIQMINRTKLQLKSDLVLTTLGPDHCDLHILEHPSEDKQTELEETGLRVAVKAEGSGDDEETMCVDEDMAMKSEDDRDIQGFVRDPLEYEGCPLQCTLCLEEFVHEHAYMQHVSMHLWSGEAEAEGEAEGQCGTSQREAHSWRVAESRRACARAASDERSEPATAEADTGHSCGHRGLTDCFVKLYDIFPRRDGSPTMTQEAVTHISHRAASPNGGPTTEYAVPGEEKLTVSQPAYICDSCQRVFKRKSLLAKHVQTHAPLNTFTCKICQYEANDTNHLIVHMRTHTGDQPFSCELCKYECNGNSDLVKHMRTHTGEKPYRCKLCAYKCNRSNDLARHMRTHTGEKPYRCKLCKYKCKRSDALVVHMRTHTGEKPYCCELCKSKFVSKCNLVLHMRTHTGEKPYFCELCKSKFVSKRNLVLHMRTHTGEKPFCCELCKSKFISKRNIVLHMRTHTGEKPFCCKLCNYKSSQKSPLVVHIRTHTGEKPFSCEICKYKCNRNSDLVQHMRTHTGEKPFCCELCKSKFISKRNLVLHMRTHTAEKPFCCELCKSKFISKRNLVLHMRTHTGEKPYCCELCNYKSSQKRRLVVHMRTHTGEKPYCCKLCEYKSSQKIHDSVLILCYTSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00954842;
90% Identity
iTF_00954574;
80% Identity
iTF_00954574;