Basic Information

Insect: Maniola jurtina
Gene Symbol: -
Assembly: GCA_905333055.1
Location: HG995236.1:5163432-5175511[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0099 0.46 11.4 2.0 1 23 292 314 292 314 0.98

2 12 2.6e-05 0.0012 19.5 3.5 1 23 534 556 534 556 0.98

3 12 0.019 0.89 10.5 5.2 1 23 562 584 562 584 0.98

4 12 0.0003 0.014 16.2 5.6 1 23 590 612 590 612 0.99

5 12 5.5e-07 2.5e-05 24.8 1.1 1 23 618 640 618 640 0.98

6 12 0.0058 0.27 12.1 3.5 1 23 646 668 646 668 0.98

7 12 5.2e-06 0.00024 21.7 2.4 1 23 674 696 674 696 0.99

8 12 2.8e-05 0.0013 19.5 0.8 1 23 925 947 925 947 0.98

9 12 0.028 1.3 10.0 9.0 1 23 953 975 953 975 0.99

10 12 5e-06 0.00023 21.8 2.1 1 23 981 1003 981 1003 0.99

11 12 4.9e-05 0.0022 18.7 3.2 1 23 1009 1031 1009 1031 0.99

12 12 0.00027 0.013 16.3 3.7 1 23 1037 1059 1037 1059 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0099	0.46	11.4	2.0	1	23	292	314	292	314	0.98
2	12	2.6e-05	0.0012	19.5	3.5	1	23	534	556	534	556	0.98
3	12	0.019	0.89	10.5	5.2	1	23	562	584	562	584	0.98
4	12	0.0003	0.014	16.2	5.6	1	23	590	612	590	612	0.99
5	12	5.5e-07	2.5e-05	24.8	1.1	1	23	618	640	618	640	0.98
6	12	0.0058	0.27	12.1	3.5	1	23	646	668	646	668	0.98
7	12	5.2e-06	0.00024	21.7	2.4	1	23	674	696	674	696	0.99
8	12	2.8e-05	0.0013	19.5	0.8	1	23	925	947	925	947	0.98
9	12	0.028	1.3	10.0	9.0	1	23	953	975	953	975	0.99
10	12	5e-06	0.00023	21.8	2.1	1	23	981	1003	981	1003	0.99
11	12	4.9e-05	0.0022	18.7	3.2	1	23	1009	1031	1009	1031	0.99
12	12	0.00027	0.013	16.3	3.7	1	23	1037	1059	1037	1059	0.98

Sequence Information

Coding Sequence: ATGCGTTGTTGTGTGCCATTCTGCACAAATACTCCCACCAATGTGTCCACATCTGAGGCGAAGGGGATCAGTTTTCACGCTCTCCCCAGTGATGTGTGTCTGCGCGCTGCTTGGCTCAGAGCCCTCGGCAAACAAGACAGTCAGCTACCAGACTCTGCTGTGGTCTGCTCCCAGCATTTTCTTGATGATGAAATTTATGAAACAGAAAGTGGCTTAAGGCAGATTGCTACTGGTGCTGTTCCTTCAACAGTGCAGGTTTGCGTGATATGCCTAGACACTGACAGCAAGCTGTATCCAATGAGTAAACACAAATTGGAAGAAGCATATGAGCGGTTAACCGGATATCCATTGTATGATCAAGGAAACCTGAAACGAACACTTTGCGTACAATGTGCTCAGAGACTAATAAACTTTAGTAGATTCAGAGACAAGAGCTTGAGAGCCCGTGCACTGATGATGGACTTAGTTGAAAAACATGAATTAATAACACGGCGACATATCAAAGGGATAAACCGCACAAAGAACCAACTAATGAGTAATTTTGTGATGAAAACTCTAGGACCTGACCACTGTGACTTATACATACTGGACTCCTCAGACAAACAGACAGAATCAGAGCCAATCAAAAGAGAGAATGAAGAAAGTTATGACTCGCCGGTTGATGAAGACATGGAAGTGGCAGAGGAAGATGACAATACTGCAGACAGTGTCAATGATGAGTTGGATGCATGTAACGAGGAGTGCTTCTCTGACAATAGCATAATGTTGGAAACAAAGCTGCTGGATGATGTTATTTGCAAAGCTCTGGAGAACCCAGTATTTGCAGAACAAGTGTCTGAAATACCGGATCTGTTAAAGTGCGAAAGTGCTGCCTTCCAATGTGCTTTATGTTCTGAGGAGTTTGTTAGTGAACATGCGTACATGCAACATATGCACATGCATGACCAGCAGAACAGTGACGGTTATGCTGACTGTAGCACGTCTCAAGTATGCAAGCCTCATACAGCCGTGAGCTCCTCACACTCTCCACACTTCACTGAGAACAAGCAGGCCATTCCTCTGAGCCAGGCCTCGAGCTCGTCTGCACACAGCCCGTCTGCACACTCACCTCAAACTGCAGTCGCTCCTCTGTCCGCGAGACTTGCGACGAGTAACGGAAACAAAGTGCAAGCTGAAGACGCCGATACAGTCCAGAAGAGTGAACCACTATTTAAAATTAACAATGTCGGATTAAACAACCAACTATTCAATACCAACAATATAACTGACATTAATAGATTGACTGATTGTGTGGTCATATTATATGATATTTTCAGAAAGCCCGAAGTAGGTGTACCAATACAAGGTGAATCACTGGCGACAATGCGACCAAGTATTAGTTCTTGGGACAGTCAGCGTCATATTGAAAAAGCCTCTAAAGATTTTAACTGTCAGGCAGTTACTTGGAATGAAGCCACTAGACATACGATAGGAGACATTCAACCAGTTACTAACAAACTGAAAGTTACTGAGCTTAATGCTACGAAAACTTCACAAAGTAAAACTTATTGTTCAAATAATTACAACAGTGAAGATAGTTTGCTTACTGAAAAGAATGGGTATATTTGTGATGTATGTAGACATAAGTTTAAACGGAAAAGTCTCTTAGTTAAACACATAAAGACTCACAGTGAAGTGAAACCGTTCACTTGCGAGTTTTGCCAATTCAAAGCCATACATAAATTTAGTTTAAAGAAACATATGCAAACTCACACGGGCGACAAACTATTTACTTGCGCGTTATGCGACTACAAATGTACACACAGTAGTAAACTAGTGCAACACATGAGAACTCACACGGGTGAAAAACCTTACATTTGTAAGTTTTGTGATTATAAATTTGTACGACCTAGTCAGTTAGTGAGCCACATGAGAACTCACACGGGTGAAAAACCTTTTACTTGCGAGTTTTGCGATTACAAATGTGCACTTAAGTATAATCTGGTGAGGCACAAAATAACTCACACGGGTGAAAAACCTTTTACTTGCGAGTTATGCGACTACAAATGTGCACAAAATAGTAATTTAGTGCAACACATGAGAACTCACACGGGTGAAAAACCTTACGTTTTCGCTCCTCTGTCCGCGAGACTTGCGACGAATAACGGAAACAAAGTGCAAGCTGAAGACGCCGATACAGTCCAGAAGAGTAAACAACTATTTAAAATTAACAATGTCAAATTAAACGACCAATTATTATTATTAGATACCAACAATATAACTGACATGAATAGATTAACAGCTGATTGTGTGGTCATATTATATGATATTTTCAAAAAGCCCGAGGGAGGTGTACCAATAAAAAGTGAATCACTGGCGACAATGCCACCAATCGCTCCTCTGTCCGCGAGACTTGCGACGAGTAACGGAAACAAAGTGCAAGCTGAAGACGCCGATACAGTCCAGAAGAGTAAACCACTATTTAAAATTAACAATGTCAAATTAAATGACCAATTATTATTATTAGATACCAACAATATAACTGACATGAATAGATTAACAGCTGATTGTGTGGTCATATTATATGATATTTTCAAAAAGCCCGAAGGAGGTGTACCAATACAAAGTGAATCACTGGCGACAATGCGACCAAGTGTTAGTTCTTGGGACAGTCAGCGTCATATTGAAAATGCCTCTAAAGATTTGAAGAATGCTACGAAAACTTCACAAAGTAAAACTTATTGTTCAAATAATTACAATAGTGAAGATAGTTTGCGTAATGACAAAAATGGGTATATTTGTGATGTATGTAGAAATACTTTTGAACGGAAAAGTCTCTTAGTTAAACACATAAAAACTCACAGTGAAGTGAAACCGTTCACTTGCAAGTTTTGTCAATTCAAAACTAAATATAAATGTAGTTTAAAGACTCATATGCGAACTCACACGGGTGAAAAACCTTTTACTTGCGAGCTATGTGATTATAAATTTGCACAAGTTAGTCATTTATTGAGCCACATGAGAACTCACACGGGTGACAAACCTTTTACTTGCGAGCTATGCGATTATAAATGTGCACAAAATAGTAGTCTAGTGCGACACAGGAGAACTCACACGGGTGAAAAACCTTTTAATTGCACATTATGCAAATATAAATGTGCGGATTCTAGAAATTTAGTGCAACACATGAGGACTCACACTGGTGAAAAATCTTACATTTTCCGGGGCTGGTCTCTGCGCGGCGGCGTTGAGTTCGCTGTCGAGCGCGGAGACGGAGTCATGTCCGGTGGATCTCGCGTCGTCGTCATCGTCGTCGCTTGGGTCGGCTGCGTGCCGCGCCGGGGATGGCGATCGCAGGAGCTCACGAGGTAG
Protein Sequence: MRCCVPFCTNTPTNVSTSEAKGISFHALPSDVCLRAAWLRALGKQDSQLPDSAVVCSQHFLDDEIYETESGLRQIATGAVPSTVQVCVICLDTDSKLYPMSKHKLEEAYERLTGYPLYDQGNLKRTLCVQCAQRLINFSRFRDKSLRARALMMDLVEKHELITRRHIKGINRTKNQLMSNFVMKTLGPDHCDLYILDSSDKQTESEPIKRENEESYDSPVDEDMEVAEEDDNTADSVNDELDACNEECFSDNSIMLETKLLDDVICKALENPVFAEQVSEIPDLLKCESAAFQCALCSEEFVSEHAYMQHMHMHDQQNSDGYADCSTSQVCKPHTAVSSSHSPHFTENKQAIPLSQASSSSAHSPSAHSPQTAVAPLSARLATSNGNKVQAEDADTVQKSEPLFKINNVGLNNQLFNTNNITDINRLTDCVVILYDIFRKPEVGVPIQGESLATMRPSISSWDSQRHIEKASKDFNCQAVTWNEATRHTIGDIQPVTNKLKVTELNATKTSQSKTYCSNNYNSEDSLLTEKNGYICDVCRHKFKRKSLLVKHIKTHSEVKPFTCEFCQFKAIHKFSLKKHMQTHTGDKLFTCALCDYKCTHSSKLVQHMRTHTGEKPYICKFCDYKFVRPSQLVSHMRTHTGEKPFTCEFCDYKCALKYNLVRHKITHTGEKPFTCELCDYKCAQNSNLVQHMRTHTGEKPYVFAPLSARLATNNGNKVQAEDADTVQKSKQLFKINNVKLNDQLLLLDTNNITDMNRLTADCVVILYDIFKKPEGGVPIKSESLATMPPIAPLSARLATSNGNKVQAEDADTVQKSKPLFKINNVKLNDQLLLLDTNNITDMNRLTADCVVILYDIFKKPEGGVPIQSESLATMRPSVSSWDSQRHIENASKDLKNATKTSQSKTYCSNNYNSEDSLRNDKNGYICDVCRNTFERKSLLVKHIKTHSEVKPFTCKFCQFKTKYKCSLKTHMRTHTGEKPFTCELCDYKFAQVSHLLSHMRTHTGDKPFTCELCDYKCAQNSSLVRHRRTHTGEKPFNCTLCKYKCADSRNLVQHMRTHTGEKSYIFRGWSLRGGVEFAVERGDGVMSGGSRVVVIVVAWVGCVPRRGWRSQELTR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00954617;
90% Identity: iTF_00954617;
80% Identity: iTF_00954617;